RNA–Protein interactions for RNA: ENST00000544916.5

PHC1-214, Transcript of polyhomeotic homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC1, Length 3,626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-214ENST00000544916 NISCHQ9Y2I1 1504 aa19.87■□□□□ 0.77
PHC1-214ENST00000544916 DCAF8L2P0C7V8 631 aa17.79■□□□□ 0.44
PHC1-214ENST00000544916 SHROOM4Q9ULL8 1493 aa17.71■□□□□ 0.43
PHC1-214ENST00000544916 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
PHC1-214ENST00000544916 PCGF6Q9BYE7 350 aa17.18■□□□□ 0.34
PHC1-214ENST00000544916 PPARGC1BQ86YN6 1023 aaKnown RBP17.04■□□□□ 0.32
PHC1-214ENST00000544916 HRCP23327 699 aa16.9■□□□□ 0.3
PHC1-214ENST00000544916 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
PHC1-214ENST00000544916 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
PHC1-214ENST00000544916 LOC105371045A0A1W2PR82 267 aa16.62■□□□□ 0.25
PHC1-214ENST00000544916 CHIC1Q5VXU3 224 aa16.58■□□□□ 0.24
PHC1-214ENST00000544916 CCDC180Q9P1Z9 1646 aa16.57■□□□□ 0.24
PHC1-214ENST00000544916 ABCC9O60706 1549 aa16.55■□□□□ 0.24
PHC1-214ENST00000544916 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
PHC1-214ENST00000544916 MYO15BQ96JP2 1530 aa16.33■□□□□ 0.2
PHC1-214ENST00000544916 TTBK1Q5TCY1 1321 aaPredicted RBP16.31■□□□□ 0.2
PHC1-214ENST00000544916 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
PHC1-214ENST00000544916 SCRIBQ14160 1630 aa16.19■□□□□ 0.18
PHC1-214ENST00000544916 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
PHC1-214ENST00000544916 PELP1Q8IZL8 1130 aaKnown RBP16.05■□□□□ 0.16
PHC1-214ENST00000544916 SCAF1Q9H7N4 1312 aaKnown RBP16.03■□□□□ 0.16
PHC1-214ENST00000544916 TRIM41Q8WV44 630 aa16■□□□□ 0.15
PHC1-214ENST00000544916 YTHDC1Q96MU7 727 aaKnown RBP15.98■□□□□ 0.15
PHC1-214ENST00000544916 CCER1Q8TC90 406 aaPredicted RBP15.98■□□□□ 0.15
PHC1-214ENST00000544916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
PHC1-214ENST00000544916 ZEB1P37275 1124 aaPredicted RBP15.94■□□□□ 0.14
PHC1-214ENST00000544916 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
PHC1-214ENST00000544916 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
PHC1-214ENST00000544916 GTF3C3Q9Y5Q9 886 aa15.82■□□□□ 0.12
PHC1-214ENST00000544916 RSF1Q96T23 1441 aaPredicted RBP15.79■□□□□ 0.12
PHC1-214ENST00000544916 NEUROD1Q13562 356 aa15.76■□□□□ 0.11
PHC1-214ENST00000544916 CENPBP07199 599 aaPredicted RBP15.76■□□□□ 0.11
PHC1-214ENST00000544916 DIEXFQ68CQ4 756 aaKnown RBP15.68■□□□□ 0.1
PHC1-214ENST00000544916 ACIN1Q9UKV3 1341 aaKnown RBP15.67■□□□□ 0.1
PHC1-214ENST00000544916 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
PHC1-214ENST00000544916 NACADO15069 1562 aa15.61■□□□□ 0.09
PHC1-214ENST00000544916 MROH2BQ7Z745 1585 aa15.61■□□□□ 0.09
PHC1-214ENST00000544916 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
PHC1-214ENST00000544916 WIZO95785 1651 aa15.49■□□□□ 0.07
PHC1-214ENST00000544916 HNRNPUL2Q1KMD3 747 aaKnown RBP15.47■□□□□ 0.07
PHC1-214ENST00000544916 UBTFP17480 764 aaKnown RBP15.44■□□□□ 0.06
PHC1-214ENST00000544916 MYT1Q01538 1121 aa15.3■□□□□ 0.04
PHC1-214ENST00000544916 MIER1Q8N108 512 aa15.25■□□□□ 0.03
PHC1-214ENST00000544916 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
PHC1-214ENST00000544916 ZNF316A6NFI3 1004 aaPredicted RBP15.24■□□□□ 0.03
PHC1-214ENST00000544916 APLP2Q06481 763 aa15.23■□□□□ 0.03
PHC1-214ENST00000544916 BAZ1AQ9NRL2 1556 aaPredicted RBP15.23■□□□□ 0.03
PHC1-214ENST00000544916 BCANQ96GW7 911 aa15.23■□□□□ 0.03
PHC1-214ENST00000544916 CCDC88BA6NC98 1476 aa15.21■□□□□ 0.03
PHC1-214ENST00000544916 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
PHC1-214ENST00000544916 ITGAEP38570 1179 aa15.15■□□□□ 0.02
PHC1-214ENST00000544916 SMARCA4P51532 1647 aa15.13■□□□□ 0.01
PHC1-214ENST00000544916 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
PHC1-214ENST00000544916 SOGA1O94964 1423 aa15.11■□□□□ 0.01
PHC1-214ENST00000544916 RUSC2Q8N2Y8 1516 aa15.06■□□□□ 0
PHC1-214ENST00000544916 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
PHC1-214ENST00000544916 TOP2AP11388 1531 aaKnown RBP15.02□□□□□ -0.01
PHC1-214ENST00000544916 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
PHC1-214ENST00000544916 SMARCA2P51531 1590 aa14.99□□□□□ -0.01
PHC1-214ENST00000544916 ATAD2BQ9ULI0 1458 aa14.96□□□□□ -0.01
PHC1-214ENST00000544916 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
PHC1-214ENST00000544916 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
PHC1-214ENST00000544916 ATP1B4Q9UN42 357 aaPredicted RBP14.88□□□□□ -0.03
PHC1-214ENST00000544916 NEFLP07196 543 aa14.84□□□□□ -0.03
PHC1-214ENST00000544916 SUPT16HQ9Y5B9 1047 aaKnown RBP14.84□□□□□ -0.03
PHC1-214ENST00000544916 FKBP8Q14318 412 aa14.82□□□□□ -0.04
PHC1-214ENST00000544916 HIRIP3Q9BW71 556 aaPredicted RBP14.82□□□□□ -0.04
PHC1-214ENST00000544916 ERICH6Q7L0X2 663 aa14.81□□□□□ -0.04
PHC1-214ENST00000544916 P3H3Q8IVL6 736 aa14.81□□□□□ -0.04
PHC1-214ENST00000544916 CNGB1Q14028 1251 aaPredicted RBP14.8□□□□□ -0.04
PHC1-214ENST00000544916 CEP162Q5TB80 1403 aa14.8□□□□□ -0.04
PHC1-214ENST00000544916 KCNH8Q96L42 1107 aa14.77□□□□□ -0.05
PHC1-214ENST00000544916 TRIM52Q96A61 297 aa14.76□□□□□ -0.05
PHC1-214ENST00000544916 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
PHC1-214ENST00000544916 DDX10Q13206 875 aaKnown RBP14.73□□□□□ -0.05
PHC1-214ENST00000544916 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
PHC1-214ENST00000544916 TSHZ2Q9NRE2 1034 aa14.71□□□□□ -0.06
PHC1-214ENST00000544916 IRX6P78412 446 aaPredicted RBP14.7□□□□□ -0.06
PHC1-214ENST00000544916 ANP32EQ9BTT0 268 aa14.7□□□□□ -0.06
PHC1-214ENST00000544916 BCL11AQ9H165 835 aa14.7□□□□□ -0.06
PHC1-214ENST00000544916 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
PHC1-214ENST00000544916 TNIKQ9UKE5 1360 aa14.64□□□□□ -0.07
PHC1-214ENST00000544916 CLIP1P30622 1438 aa14.62□□□□□ -0.07
PHC1-214ENST00000544916 GOLGA3Q08378 1498 aa14.61□□□□□ -0.07
PHC1-214ENST00000544916 ARID3CA6NKF2 412 aa14.61□□□□□ -0.07
PHC1-214ENST00000544916 FAM50AQ14320 339 aaKnown RBP14.6□□□□□ -0.07
PHC1-214ENST00000544916 NESP48681 1621 aa14.58□□□□□ -0.08
PHC1-214ENST00000544916 NCAPD3P42695 1498 aa14.58□□□□□ -0.08
PHC1-214ENST00000544916 KANK4Q5T7N3 995 aaPredicted RBP14.55□□□□□ -0.08
PHC1-214ENST00000544916 PEG3Q9GZU2 1588 aa14.55□□□□□ -0.08
PHC1-214ENST00000544916 SENP3-EIF4A1A0A087X0R7 540 aa14.54□□□□□ -0.08
PHC1-214ENST00000544916 CEP164Q9UPV0 1460 aa14.53□□□□□ -0.08
PHC1-214ENST00000544916 CUX2O14529 1486 aa14.51□□□□□ -0.09
PHC1-214ENST00000544916 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
PHC1-214ENST00000544916 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
PHC1-214ENST00000544916 EEA1Q15075 1411 aa14.51□□□□□ -0.09
PHC1-214ENST00000544916 SIN3AQ96ST3 1273 aa14.5□□□□□ -0.09
PHC1-214ENST00000544916 POLR3GLQ9BT43 218 aa14.5□□□□□ -0.09
PHC1-214ENST00000544916 CUX1P39880 1505 aa14.49□□□□□ -0.09
PHC1-214ENST00000544916 RBM19Q9Y4C8 960 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms