RNA–Protein interactions for RNA: ENST00000621069.1

KRBA1-209, Transcript of KRAB-A domain containing 1, humanhuman

TSL 1 (best)

Gene KRBA1, Length 3,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBA1-209ENST00000621069 NISCHQ9Y2I1 1504 aa27.27■■□□□ 1.96
KRBA1-209ENST00000621069 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.49
KRBA1-209ENST00000621069 SHROOM4Q9ULL8 1493 aa23.54■■□□□ 1.36
KRBA1-209ENST00000621069 ABCC9O60706 1549 aa23.44■■□□□ 1.34
KRBA1-209ENST00000621069 CCDC180Q9P1Z9 1646 aa23.25■■□□□ 1.31
KRBA1-209ENST00000621069 ZCCHC6Q5VYS8 1495 aaKnown RBP22.74■■□□□ 1.23
KRBA1-209ENST00000621069 SUPT5HO00267 1087 aaKnown RBP22.68■■□□□ 1.22
KRBA1-209ENST00000621069 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
KRBA1-209ENST00000621069 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
KRBA1-209ENST00000621069 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
KRBA1-209ENST00000621069 NACADO15069 1562 aa21.99■■□□□ 1.11
KRBA1-209ENST00000621069 DCAF1Q9Y4B6 1507 aa21.93■■□□□ 1.1
KRBA1-209ENST00000621069 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
KRBA1-209ENST00000621069 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
KRBA1-209ENST00000621069 EHMT2Q96KQ7 1210 aa21.39■■□□□ 1.02
KRBA1-209ENST00000621069 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
KRBA1-209ENST00000621069 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
KRBA1-209ENST00000621069 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
KRBA1-209ENST00000621069 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
KRBA1-209ENST00000621069 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
KRBA1-209ENST00000621069 WIZO95785 1651 aa21.12■□□□□ 0.97
KRBA1-209ENST00000621069 DNAJC5BQ9UF47 199 aa21.04■□□□□ 0.96
KRBA1-209ENST00000621069 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
KRBA1-209ENST00000621069 CHIC1Q5VXU3 224 aa20.99■□□□□ 0.95
KRBA1-209ENST00000621069 TRIM41Q8WV44 630 aa20.95■□□□□ 0.94
KRBA1-209ENST00000621069 SMARCA4P51532 1647 aa20.94■□□□□ 0.94
KRBA1-209ENST00000621069 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
KRBA1-209ENST00000621069 BAZ1BQ9UIG0 1483 aaKnown RBP20.85■□□□□ 0.93
KRBA1-209ENST00000621069 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
KRBA1-209ENST00000621069 CCDC88BA6NC98 1476 aa20.72■□□□□ 0.91
KRBA1-209ENST00000621069 LOC105371045A0A1W2PR82 267 aa20.71■□□□□ 0.91
KRBA1-209ENST00000621069 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
KRBA1-209ENST00000621069 RANGAP1P46060 587 aaPredicted RBP20.66■□□□□ 0.9
KRBA1-209ENST00000621069 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
KRBA1-209ENST00000621069 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.88
KRBA1-209ENST00000621069 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
KRBA1-209ENST00000621069 NCAPD3P42695 1498 aa20.45■□□□□ 0.86
KRBA1-209ENST00000621069 NESP48681 1621 aa20.41■□□□□ 0.86
KRBA1-209ENST00000621069 TTBK1Q5TCY1 1321 aaPredicted RBP20.34■□□□□ 0.85
KRBA1-209ENST00000621069 UBTFP17480 764 aaKnown RBP20.3■□□□□ 0.84
KRBA1-209ENST00000621069 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
KRBA1-209ENST00000621069 CADPSQ9ULU8 1353 aa20.24■□□□□ 0.83
KRBA1-209ENST00000621069 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
KRBA1-209ENST00000621069 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
KRBA1-209ENST00000621069 HMGXB3Q12766 1538 aa20.19■□□□□ 0.82
KRBA1-209ENST00000621069 SOGA1O94964 1423 aa20.15■□□□□ 0.82
KRBA1-209ENST00000621069 ERCC6Q03468 1493 aa20.1■□□□□ 0.81
KRBA1-209ENST00000621069 RUSC2Q8N2Y8 1516 aa20.09■□□□□ 0.81
KRBA1-209ENST00000621069 FBLN2P98095 1184 aa20.07■□□□□ 0.8
KRBA1-209ENST00000621069 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
KRBA1-209ENST00000621069 CSRNP3Q8WYN3 585 aa20.05■□□□□ 0.8
KRBA1-209ENST00000621069 CFTRP13569 1480 aa20.04■□□□□ 0.8
KRBA1-209ENST00000621069 ATP1B4Q9UN42 357 aaPredicted RBP19.96■□□□□ 0.79
KRBA1-209ENST00000621069 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
KRBA1-209ENST00000621069 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
KRBA1-209ENST00000621069 PDS5BQ9NTI5 1447 aa19.94■□□□□ 0.78
KRBA1-209ENST00000621069 P3H3Q8IVL6 736 aa19.93■□□□□ 0.78
KRBA1-209ENST00000621069 RAD54L2Q9Y4B4 1467 aa19.91■□□□□ 0.78
KRBA1-209ENST00000621069 CEP164Q9UPV0 1460 aa19.91■□□□□ 0.78
KRBA1-209ENST00000621069 CUX2O14529 1486 aa19.85■□□□□ 0.77
KRBA1-209ENST00000621069 CUX1P39880 1505 aa19.85■□□□□ 0.77
KRBA1-209ENST00000621069 FGD5Q6ZNL6 1462 aa19.81■□□□□ 0.76
KRBA1-209ENST00000621069 PCGF6Q9BYE7 350 aa19.78■□□□□ 0.76
KRBA1-209ENST00000621069 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
KRBA1-209ENST00000621069 HRCP23327 699 aa19.76■□□□□ 0.75
KRBA1-209ENST00000621069 URB2Q14146 1524 aaKnown RBP19.72■□□□□ 0.75
KRBA1-209ENST00000621069 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
KRBA1-209ENST00000621069 AQRO60306 1485 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■■■■ 34.2
KRBA1-209ENST00000621069 KIF27Q86VH2 1401 aa19.69■□□□□ 0.74
KRBA1-209ENST00000621069 LAMC3Q9Y6N6 1575 aa19.69■□□□□ 0.74
KRBA1-209ENST00000621069 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
KRBA1-209ENST00000621069 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
KRBA1-209ENST00000621069 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
KRBA1-209ENST00000621069 CHMP7Q8WUX9 453 aaPredicted RBP19.62■□□□□ 0.73
KRBA1-209ENST00000621069 RAPGEF2Q9Y4G8 1499 aa19.62■□□□□ 0.73
KRBA1-209ENST00000621069 APLP2Q06481 763 aa19.6■□□□□ 0.73
KRBA1-209ENST00000621069 CARMIL1Q5VZK9 1371 aa19.58■□□□□ 0.73
KRBA1-209ENST00000621069 MRC2Q9UBG0 1479 aa19.56■□□□□ 0.72
KRBA1-209ENST00000621069 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
KRBA1-209ENST00000621069 IGF1RP08069 1367 aa19.55■□□□□ 0.72
KRBA1-209ENST00000621069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.72
KRBA1-209ENST00000621069 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.72
KRBA1-209ENST00000621069 DNMBPQ6XZF7 1577 aa19.52■□□□□ 0.71
KRBA1-209ENST00000621069 CEP162Q5TB80 1403 aa19.49■□□□□ 0.71
KRBA1-209ENST00000621069 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
KRBA1-209ENST00000621069 GAPVD1Q14C86 1478 aa19.46■□□□□ 0.71
KRBA1-209ENST00000621069 EEA1Q15075 1411 aa19.45■□□□□ 0.7
KRBA1-209ENST00000621069 CLIP1P30622 1438 aa19.42■□□□□ 0.7
KRBA1-209ENST00000621069 BIVM-ERCC5R4GMW8 1640 aa19.41■□□□□ 0.7
KRBA1-209ENST00000621069 ITGAEP38570 1179 aa19.41■□□□□ 0.7
KRBA1-209ENST00000621069 TNIKQ9UKE5 1360 aa19.37■□□□□ 0.69
KRBA1-209ENST00000621069 PRDM2Q13029 1718 aa19.35■□□□□ 0.69
KRBA1-209ENST00000621069 ABCA10Q8WWZ4 1543 aa19.31■□□□□ 0.68
KRBA1-209ENST00000621069 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.68
KRBA1-209ENST00000621069 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
KRBA1-209ENST00000621069 PRXQ9BXM0 1461 aa19.25■□□□□ 0.67
KRBA1-209ENST00000621069 FHOD3Q2V2M9 1422 aa19.23■□□□□ 0.67
KRBA1-209ENST00000621069 GRIN2BQ13224 1484 aa19.2■□□□□ 0.66
KRBA1-209ENST00000621069 WDR62O43379 1518 aa19.2■□□□□ 0.66
KRBA1-209ENST00000621069 KANK4Q5T7N3 995 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms