RNA–Protein interactions for RNA: ENST00000247026.9

NSRP1-201, Transcript of nuclear speckle splicing regulatory protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSRP1, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSRP1-201ENST00000247026 NISCHQ9Y2I1 1504 aa22.73■■□□□ 1.23
NSRP1-201ENST00000247026 CCDC180Q9P1Z9 1646 aa19.52■□□□□ 0.72
NSRP1-201ENST00000247026 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
NSRP1-201ENST00000247026 SHROOM4Q9ULL8 1493 aa19.02■□□□□ 0.63
NSRP1-201ENST00000247026 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.63
NSRP1-201ENST00000247026 DCAF1Q9Y4B6 1507 aa18.67■□□□□ 0.58
NSRP1-201ENST00000247026 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
NSRP1-201ENST00000247026 ABCC9O60706 1549 aa18.44■□□□□ 0.54
NSRP1-201ENST00000247026 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
NSRP1-201ENST00000247026 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
NSRP1-201ENST00000247026 NACADO15069 1562 aa18.17■□□□□ 0.5
NSRP1-201ENST00000247026 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
NSRP1-201ENST00000247026 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
NSRP1-201ENST00000247026 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
NSRP1-201ENST00000247026 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
NSRP1-201ENST00000247026 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
NSRP1-201ENST00000247026 UNC13AQ9UPW8 1703 aa17.62■□□□□ 0.41
NSRP1-201ENST00000247026 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
NSRP1-201ENST00000247026 WIZO95785 1651 aa17.5■□□□□ 0.39
NSRP1-201ENST00000247026 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
NSRP1-201ENST00000247026 BICRAQ9NZM4 1560 aa17.46■□□□□ 0.39
NSRP1-201ENST00000247026 SMARCA4P51532 1647 aa17.38■□□□□ 0.37
NSRP1-201ENST00000247026 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
NSRP1-201ENST00000247026 TOP2AP11388 1531 aaKnown RBP17.25■□□□□ 0.35
NSRP1-201ENST00000247026 LOC105371045A0A1W2PR82 267 aa17.19■□□□□ 0.34
NSRP1-201ENST00000247026 CCDC88BA6NC98 1476 aa17.16■□□□□ 0.34
NSRP1-201ENST00000247026 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
NSRP1-201ENST00000247026 PEG3Q9GZU2 1588 aa17.09■□□□□ 0.33
NSRP1-201ENST00000247026 FAM9AQ8IZU1 332 aaPredicted RBP17.06■□□□□ 0.32
NSRP1-201ENST00000247026 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
NSRP1-201ENST00000247026 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
NSRP1-201ENST00000247026 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
NSRP1-201ENST00000247026 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
NSRP1-201ENST00000247026 EHMT2Q96KQ7 1210 aa16.91■□□□□ 0.3
NSRP1-201ENST00000247026 NCAPD3P42695 1498 aa16.82■□□□□ 0.28
NSRP1-201ENST00000247026 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
NSRP1-201ENST00000247026 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.27
NSRP1-201ENST00000247026 PCGF6Q9BYE7 350 aa16.73■□□□□ 0.27
NSRP1-201ENST00000247026 SOGA1O94964 1423 aa16.72■□□□□ 0.27
NSRP1-201ENST00000247026 SYNJ1O43426 1573 aa16.66■□□□□ 0.26
NSRP1-201ENST00000247026 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
NSRP1-201ENST00000247026 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
NSRP1-201ENST00000247026 CC2D2AQ9P2K1 1620 aa16.61■□□□□ 0.25
NSRP1-201ENST00000247026 EEA1Q15075 1411 aa16.59■□□□□ 0.25
NSRP1-201ENST00000247026 CFTRP13569 1480 aa16.56■□□□□ 0.24
NSRP1-201ENST00000247026 TRIM26Q12899 539 aaPredicted RBP16.54■□□□□ 0.24
NSRP1-201ENST00000247026 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
NSRP1-201ENST00000247026 UBTFP17480 764 aaKnown RBP16.5■□□□□ 0.23
NSRP1-201ENST00000247026 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
NSRP1-201ENST00000247026 TNIKQ9UKE5 1360 aa16.46■□□□□ 0.23
NSRP1-201ENST00000247026 CUX1P39880 1505 aa16.44■□□□□ 0.22
NSRP1-201ENST00000247026 BIVM-ERCC5R4GMW8 1640 aa16.44■□□□□ 0.22
NSRP1-201ENST00000247026 CEP162Q5TB80 1403 aa16.44■□□□□ 0.22
NSRP1-201ENST00000247026 GOLGA3Q08378 1498 aa16.43■□□□□ 0.22
NSRP1-201ENST00000247026 PPARGC1BQ86YN6 1023 aaKnown RBP16.43■□□□□ 0.22
NSRP1-201ENST00000247026 HRCP23327 699 aa16.42■□□□□ 0.22
NSRP1-201ENST00000247026 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.22
NSRP1-201ENST00000247026 KIF21BO75037 1637 aa16.35■□□□□ 0.21
NSRP1-201ENST00000247026 PRDM2Q13029 1718 aa16.35■□□□□ 0.21
NSRP1-201ENST00000247026 RAPGEF2Q9Y4G8 1499 aa16.33■□□□□ 0.21
NSRP1-201ENST00000247026 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
NSRP1-201ENST00000247026 NESP48681 1621 aa16.3■□□□□ 0.2
NSRP1-201ENST00000247026 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
NSRP1-201ENST00000247026 KIF27Q86VH2 1401 aa16.28■□□□□ 0.2
NSRP1-201ENST00000247026 RANGAP1P46060 587 aaPredicted RBP16.26■□□□□ 0.19
NSRP1-201ENST00000247026 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
NSRP1-201ENST00000247026 CLIP1P30622 1438 aa16.24■□□□□ 0.19
NSRP1-201ENST00000247026 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
NSRP1-201ENST00000247026 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
NSRP1-201ENST00000247026 CUX2O14529 1486 aa16.21■□□□□ 0.18
NSRP1-201ENST00000247026 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
NSRP1-201ENST00000247026 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
NSRP1-201ENST00000247026 IGF1RP08069 1367 aa16.15■□□□□ 0.18
NSRP1-201ENST00000247026 TOPBP1Q92547 1522 aa16.14■□□□□ 0.17
NSRP1-201ENST00000247026 DNMBPQ6XZF7 1577 aa16.13■□□□□ 0.17
NSRP1-201ENST00000247026 RAD54L2Q9Y4B4 1467 aa16.11■□□□□ 0.17
NSRP1-201ENST00000247026 VPS8Q8N3P4 1428 aa16.1■□□□□ 0.17
NSRP1-201ENST00000247026 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
NSRP1-201ENST00000247026 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
NSRP1-201ENST00000247026 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
NSRP1-201ENST00000247026 URB2Q14146 1524 aaKnown RBP16.07■□□□□ 0.16
NSRP1-201ENST00000247026 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
NSRP1-201ENST00000247026 APLP2Q06481 763 aa16.04■□□□□ 0.16
NSRP1-201ENST00000247026 ARAP1Q96P48 1450 aa16.01■□□□□ 0.15
NSRP1-201ENST00000247026 KIF21AQ7Z4S6 1674 aa15.99■□□□□ 0.15
NSRP1-201ENST00000247026 ZEB1P37275 1124 aaPredicted RBP15.98■□□□□ 0.15
NSRP1-201ENST00000247026 ARHGAP35Q9NRY4 1499 aa15.96■□□□□ 0.15
NSRP1-201ENST00000247026 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
NSRP1-201ENST00000247026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.14
NSRP1-201ENST00000247026 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
NSRP1-201ENST00000247026 CCER1Q8TC90 406 aaPredicted RBP15.89■□□□□ 0.13
NSRP1-201ENST00000247026 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
NSRP1-201ENST00000247026 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
NSRP1-201ENST00000247026 P3H3Q8IVL6 736 aa15.86■□□□□ 0.13
NSRP1-201ENST00000247026 CUL7Q14999 1698 aa15.86■□□□□ 0.13
NSRP1-201ENST00000247026 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
NSRP1-201ENST00000247026 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
NSRP1-201ENST00000247026 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
NSRP1-201ENST00000247026 TARBP1Q13395 1621 aaKnown RBP15.82■□□□□ 0.12
NSRP1-201ENST00000247026 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.127e-6■□□□□ 9.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms