RNA–Protein interactions for RNA: ENST00000466656.1

SP140L-207, Transcript of SP140 nuclear body protein like, humanhuman

TSL 4

Gene SP140L, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140L-207ENST00000466656 AEBP2Q6ZN18 517 aaPredicted RBP35.18■■■■□ 3.22
SP140L-207ENST00000466656 CHIC1Q5VXU3 224 aa34.23■■■■□ 3.07
SP140L-207ENST00000466656 PHF23Q9BUL5 403 aaPredicted RBP30.07■■■□□ 2.4
SP140L-207ENST00000466656 SENP3Q9H4L4 574 aaPredicted RBP29.92■■■□□ 2.38
SP140L-207ENST00000466656 FOXD1Q16676 465 aa27.76■■■□□ 2.03
SP140L-207ENST00000466656 PLPPR3Q6T4P5 718 aa27.73■■■□□ 2.03
SP140L-207ENST00000466656 NISCHQ9Y2I1 1504 aa27.67■■■□□ 2.02
SP140L-207ENST00000466656 PPP6R1Q9UPN7 881 aa26.58■■□□□ 1.85
SP140L-207ENST00000466656 ADRA2BP18089 450 aa26.54■■□□□ 1.84
SP140L-207ENST00000466656 ABCC9O60706 1549 aa26.19■■□□□ 1.78
SP140L-207ENST00000466656 PIAS4Q8N2W9 510 aaPredicted RBP26.13■■□□□ 1.77
SP140L-207ENST00000466656 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
SP140L-207ENST00000466656 MSH5O43196 834 aa25.69■■□□□ 1.7
SP140L-207ENST00000466656 CCDC180Q9P1Z9 1646 aa24.71■■□□□ 1.55
SP140L-207ENST00000466656 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
SP140L-207ENST00000466656 PPP4R3CPQ6ZMV5 832 aa24.41■■□□□ 1.5
SP140L-207ENST00000466656 SCAF1Q9H7N4 1312 aaKnown RBP24.34■■□□□ 1.49
SP140L-207ENST00000466656 RB1CC1Q8TDY2 1594 aa24.22■■□□□ 1.47
SP140L-207ENST00000466656 PABPN1Q86U42 306 aaKnown RBP eCLIP24.21■■□□□ 1.47
SP140L-207ENST00000466656 MAPK8IP2Q13387 824 aaPredicted RBP24.13■■□□□ 1.45
SP140L-207ENST00000466656 DMRT2Q9Y5R5 561 aa23.85■■□□□ 1.41
SP140L-207ENST00000466656 CNKSR2Q8WXI2 1034 aa23.77■■□□□ 1.4
SP140L-207ENST00000466656 NCBP3Q53F19 620 aaKnown RBP23.74■■□□□ 1.39
SP140L-207ENST00000466656 NACADO15069 1562 aa23.74■■□□□ 1.39
SP140L-207ENST00000466656 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
SP140L-207ENST00000466656 POTEDQ86YR6 584 aa23.67■■□□□ 1.38
SP140L-207ENST00000466656 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
SP140L-207ENST00000466656 KCNA4P22459 653 aa23.63■■□□□ 1.37
SP140L-207ENST00000466656 UNC13AQ9UPW8 1703 aa23.63■■□□□ 1.37
SP140L-207ENST00000466656 CC2D2AQ9P2K1 1620 aa23.53■■□□□ 1.36
SP140L-207ENST00000466656 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
SP140L-207ENST00000466656 DCAF8L2P0C7V8 631 aa23.41■■□□□ 1.34
SP140L-207ENST00000466656 NPM3O75607 178 aaKnown RBP23.36■■□□□ 1.33
SP140L-207ENST00000466656 RNF216Q9NWF9 866 aaPredicted RBP23.35■■□□□ 1.33
SP140L-207ENST00000466656 HOXD11P31277 338 aaPredicted RBP23.3■■□□□ 1.32
SP140L-207ENST00000466656 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
SP140L-207ENST00000466656 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
SP140L-207ENST00000466656 CUX2O14529 1486 aa23.07■■□□□ 1.28
SP140L-207ENST00000466656 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
SP140L-207ENST00000466656 DCAF1Q9Y4B6 1507 aa23■■□□□ 1.27
SP140L-207ENST00000466656 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
SP140L-207ENST00000466656 DCAF8L1A6NGE4 600 aa22.79■■□□□ 1.24
SP140L-207ENST00000466656 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
SP140L-207ENST00000466656 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
SP140L-207ENST00000466656 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
SP140L-207ENST00000466656 SUPT5HO00267 1087 aaKnown RBP22.23■■□□□ 1.15
SP140L-207ENST00000466656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.19■■□□□ 1.14
SP140L-207ENST00000466656 NESP48681 1621 aa22.13■■□□□ 1.13
SP140L-207ENST00000466656 SLC4A2P04920 1241 aa22.1■■□□□ 1.13
SP140L-207ENST00000466656 THOC2Q8NI27 1593 aaKnown RBP22.1■■□□□ 1.13
SP140L-207ENST00000466656 NCAPD3P42695 1498 aa22■■□□□ 1.11
SP140L-207ENST00000466656 RNF39Q9H2S5 420 aa21.99■■□□□ 1.11
SP140L-207ENST00000466656 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
SP140L-207ENST00000466656 OSCARQ8IYS5 282 aa21.82■■□□□ 1.08
SP140L-207ENST00000466656 FOXD4L1Q9NU39 408 aa21.82■■□□□ 1.08
SP140L-207ENST00000466656 U3KPZ7 1027 aaPredicted RBP21.8■■□□□ 1.08
SP140L-207ENST00000466656 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
SP140L-207ENST00000466656 C1QBPQ07021 282 aaKnown RBP21.74■■□□□ 1.07
SP140L-207ENST00000466656 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
SP140L-207ENST00000466656 ZBTB22O15209 634 aa21.72■■□□□ 1.07
SP140L-207ENST00000466656 KIF21AQ7Z4S6 1674 aa21.68■■□□□ 1.06
SP140L-207ENST00000466656 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
SP140L-207ENST00000466656 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
SP140L-207ENST00000466656 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
SP140L-207ENST00000466656 RSF1Q96T23 1441 aaPredicted RBP21.66■■□□□ 1.06
SP140L-207ENST00000466656 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
SP140L-207ENST00000466656 LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.05
SP140L-207ENST00000466656 TRHP20396 242 aaPredicted RBP21.61■■□□□ 1.05
SP140L-207ENST00000466656 MYCNP04198 464 aaPredicted RBP21.6■■□□□ 1.05
SP140L-207ENST00000466656 EHMT2Q96KQ7 1210 aa21.6■■□□□ 1.05
SP140L-207ENST00000466656 PDS5BQ9NTI5 1447 aa21.6■■□□□ 1.05
SP140L-207ENST00000466656 CACNB1Q02641 598 aaPredicted RBP21.53■■□□□ 1.04
SP140L-207ENST00000466656 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.03
SP140L-207ENST00000466656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
SP140L-207ENST00000466656 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
SP140L-207ENST00000466656 WDR62O43379 1518 aa21.5■■□□□ 1.03
SP140L-207ENST00000466656 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
SP140L-207ENST00000466656 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
SP140L-207ENST00000466656 CYB5RLQ6IPT4 315 aa21.44■■□□□ 1.02
SP140L-207ENST00000466656 SAMD1Q6SPF0 538 aaPredicted RBP21.42■■□□□ 1.02
SP140L-207ENST00000466656 BAZ1BQ9UIG0 1483 aaKnown RBP21.42■■□□□ 1.02
SP140L-207ENST00000466656 ILDR1Q86SU0 546 aaPredicted RBP21.37■■□□□ 1.01
SP140L-207ENST00000466656 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
SP140L-207ENST00000466656 APLP2Q06481 763 aa21.33■■□□□ 1.01
SP140L-207ENST00000466656 SMARCA4P51532 1647 aa21.32■■□□□ 1
SP140L-207ENST00000466656 WIZO95785 1651 aa21.28■■□□□ 1
SP140L-207ENST00000466656 CADPSQ9ULU8 1353 aa21.26■□□□□ 0.99
SP140L-207ENST00000466656 SPINK5Q9NQ38 1064 aaPredicted RBP21.23■□□□□ 0.99
SP140L-207ENST00000466656 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
SP140L-207ENST00000466656 CAPN15O75808 1086 aa21.16■□□□□ 0.98
SP140L-207ENST00000466656 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
SP140L-207ENST00000466656 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
SP140L-207ENST00000466656 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
SP140L-207ENST00000466656 ATXN8OSP0DMR3 200 aa21.1■□□□□ 0.97
SP140L-207ENST00000466656 ZNF219Q9P2Y4 722 aaPredicted RBP21.03■□□□□ 0.96
SP140L-207ENST00000466656 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
SP140L-207ENST00000466656 ATF5Q9Y2D1 282 aaPredicted RBP21■□□□□ 0.95
SP140L-207ENST00000466656 URB2Q14146 1524 aaKnown RBP20.95■□□□□ 0.94
SP140L-207ENST00000466656 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
SP140L-207ENST00000466656 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms