RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 NISCHQ9Y2I1 1504 aa28.49■■■□□ 2.15
NCDN-204ENST00000423723 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
NCDN-204ENST00000423723 ABCC9O60706 1549 aa24.91■■□□□ 1.58
NCDN-204ENST00000423723 RB1CC1Q8TDY2 1594 aa23.94■■□□□ 1.42
NCDN-204ENST00000423723 NACADO15069 1562 aa23.93■■□□□ 1.42
NCDN-204ENST00000423723 MYO15BQ96JP2 1530 aa23.85■■□□□ 1.41
NCDN-204ENST00000423723 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
NCDN-204ENST00000423723 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
NCDN-204ENST00000423723 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
NCDN-204ENST00000423723 UNC13AQ9UPW8 1703 aa23.32■■□□□ 1.32
NCDN-204ENST00000423723 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.32
NCDN-204ENST00000423723 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
NCDN-204ENST00000423723 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
NCDN-204ENST00000423723 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
NCDN-204ENST00000423723 SCRIBQ14160 1630 aa23■■□□□ 1.27
NCDN-204ENST00000423723 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
NCDN-204ENST00000423723 CC2D2AQ9P2K1 1620 aa22.56■■□□□ 1.2
NCDN-204ENST00000423723 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
NCDN-204ENST00000423723 NCAPD3P42695 1498 aa22.16■■□□□ 1.14
NCDN-204ENST00000423723 ATAD2BQ9ULI0 1458 aa22.09■■□□□ 1.13
NCDN-204ENST00000423723 SMARCA4P51532 1647 aa22.07■■□□□ 1.12
NCDN-204ENST00000423723 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
NCDN-204ENST00000423723 SMARCA2P51531 1590 aa22■■□□□ 1.11
NCDN-204ENST00000423723 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
NCDN-204ENST00000423723 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
NCDN-204ENST00000423723 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
NCDN-204ENST00000423723 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
NCDN-204ENST00000423723 RSF1Q96T23 1441 aaPredicted RBP21.66■■□□□ 1.06
NCDN-204ENST00000423723 WIZO95785 1651 aa21.6■■□□□ 1.05
NCDN-204ENST00000423723 NESP48681 1621 aa21.54■■□□□ 1.04
NCDN-204ENST00000423723 LAMC3Q9Y6N6 1575 aa21.49■■□□□ 1.03
NCDN-204ENST00000423723 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
NCDN-204ENST00000423723 ERCC6Q03468 1493 aa21.45■■□□□ 1.03
NCDN-204ENST00000423723 CUX2O14529 1486 aa21.42■■□□□ 1.02
NCDN-204ENST00000423723 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
NCDN-204ENST00000423723 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
NCDN-204ENST00000423723 CFTRP13569 1480 aa21.31■■□□□ 1
NCDN-204ENST00000423723 THOC2Q8NI27 1593 aaKnown RBP21.24■□□□□ 0.99
NCDN-204ENST00000423723 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
NCDN-204ENST00000423723 KIF21AQ7Z4S6 1674 aa21.2■□□□□ 0.98
NCDN-204ENST00000423723 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.98
NCDN-204ENST00000423723 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
NCDN-204ENST00000423723 CEP164Q9UPV0 1460 aa21.1■□□□□ 0.97
NCDN-204ENST00000423723 WDR62O43379 1518 aa21.09■□□□□ 0.97
NCDN-204ENST00000423723 DNAJC5Q9H3Z4 198 aa21.05■□□□□ 0.96
NCDN-204ENST00000423723 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
NCDN-204ENST00000423723 PRDM2Q13029 1718 aa20.94■□□□□ 0.94
NCDN-204ENST00000423723 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.93
NCDN-204ENST00000423723 ABCC8Q09428 1581 aa20.83■□□□□ 0.92
NCDN-204ENST00000423723 TOPBP1Q92547 1522 aa20.79■□□□□ 0.92
NCDN-204ENST00000423723 IFT140Q96RY7 1462 aa20.73■□□□□ 0.91
NCDN-204ENST00000423723 DNMBPQ6XZF7 1577 aa20.72■□□□□ 0.91
NCDN-204ENST00000423723 ZNF608Q9ULD9 1512 aaPredicted RBP20.61■□□□□ 0.89
NCDN-204ENST00000423723 POLA1P09884 1462 aaPredicted RBP20.61■□□□□ 0.89
NCDN-204ENST00000423723 TARBP1Q13395 1621 aaKnown RBP20.58■□□□□ 0.89
NCDN-204ENST00000423723 CUX1P39880 1505 aa20.56■□□□□ 0.88
NCDN-204ENST00000423723 SOGA1O94964 1423 aa20.53■□□□□ 0.88
NCDN-204ENST00000423723 OSCARQ8IYS5 282 aa20.53■□□□□ 0.88
NCDN-204ENST00000423723 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
NCDN-204ENST00000423723 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
NCDN-204ENST00000423723 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.873e-7■■■■■ 33.6
NCDN-204ENST00000423723 EIF4G3O43432 1585 aaKnown RBP20.45■□□□□ 0.86
NCDN-204ENST00000423723 WDR97A6NE52 1622 aa20.44■□□□□ 0.86
NCDN-204ENST00000423723 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
NCDN-204ENST00000423723 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
NCDN-204ENST00000423723 ABCA10Q8WWZ4 1543 aa20.36■□□□□ 0.85
NCDN-204ENST00000423723 TOP2BQ02880 1626 aa20.34■□□□□ 0.85
NCDN-204ENST00000423723 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
NCDN-204ENST00000423723 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
NCDN-204ENST00000423723 MAGI1Q96QZ7 1491 aaPredicted RBP20.28■□□□□ 0.84
NCDN-204ENST00000423723 SYNJ1O43426 1573 aa20.28■□□□□ 0.84
NCDN-204ENST00000423723 GAPVD1Q14C86 1478 aa20.27■□□□□ 0.84
NCDN-204ENST00000423723 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
NCDN-204ENST00000423723 ABCA5Q8WWZ7 1642 aa20.23■□□□□ 0.83
NCDN-204ENST00000423723 SYNJ2O15056 1496 aa20.2■□□□□ 0.82
NCDN-204ENST00000423723 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
NCDN-204ENST00000423723 CHD1O14646 1710 aa20.19■□□□□ 0.82
NCDN-204ENST00000423723 FBLN2P98095 1184 aa20.18■□□□□ 0.82
NCDN-204ENST00000423723 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
NCDN-204ENST00000423723 PBRM1Q86U86 1689 aa20.12■□□□□ 0.81
NCDN-204ENST00000423723 RIMBP3CA6NJZ7 1639 aa20.1■□□□□ 0.81
NCDN-204ENST00000423723 RIMBP3BA6NNM3 1639 aa20.1■□□□□ 0.81
NCDN-204ENST00000423723 RIMBP3Q9UFD9 1639 aa20.1■□□□□ 0.81
NCDN-204ENST00000423723 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
NCDN-204ENST00000423723 CLASP1Q7Z460 1538 aa20.1■□□□□ 0.81
NCDN-204ENST00000423723 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
NCDN-204ENST00000423723 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
NCDN-204ENST00000423723 GRIN2AQ12879 1464 aa20.04■□□□□ 0.8
NCDN-204ENST00000423723 ADAMTS12P58397 1594 aa20.02■□□□□ 0.8
NCDN-204ENST00000423723 NUP160Q12769 1436 aa20.02■□□□□ 0.79
NCDN-204ENST00000423723 IGF1RP08069 1367 aa20■□□□□ 0.79
NCDN-204ENST00000423723 KIF27Q86VH2 1401 aa19.97■□□□□ 0.79
NCDN-204ENST00000423723 ARAP1Q96P48 1450 aa19.96■□□□□ 0.79
NCDN-204ENST00000423723 CYB5RLQ6IPT4 315 aa19.95■□□□□ 0.78
NCDN-204ENST00000423723 CEP170Q5SW79 1584 aa19.91■□□□□ 0.78
NCDN-204ENST00000423723 SHROOM2Q13796 1616 aa19.84■□□□□ 0.77
NCDN-204ENST00000423723 JPH4Q96JJ6 628 aa19.82■□□□□ 0.76
NCDN-204ENST00000423723 CARMIL1Q5VZK9 1371 aa19.82■□□□□ 0.76
NCDN-204ENST00000423723 CUL7Q14999 1698 aa19.8■□□□□ 0.76
NCDN-204ENST00000423723 KIAA0586Q9BVV6 1533 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 350 ms