RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
PCNX4-202ENST00000391611 DCAF8L2P0C7V8 631 aa22.47■■□□□ 1.19
PCNX4-202ENST00000391611 SUPT5HO00267 1087 aaKnown RBP22.06■■□□□ 1.12
PCNX4-202ENST00000391611 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.08
PCNX4-202ENST00000391611 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
PCNX4-202ENST00000391611 PCGF6Q9BYE7 350 aa20.98■□□□□ 0.95
PCNX4-202ENST00000391611 FAM9AQ8IZU1 332 aaPredicted RBP20.74■□□□□ 0.91
PCNX4-202ENST00000391611 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
PCNX4-202ENST00000391611 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
PCNX4-202ENST00000391611 HRCP23327 699 aa20.21■□□□□ 0.83
PCNX4-202ENST00000391611 LOC105371045A0A1W2PR82 267 aa20.21■□□□□ 0.83
PCNX4-202ENST00000391611 CHIC1Q5VXU3 224 aa20.19■□□□□ 0.82
PCNX4-202ENST00000391611 PPARGC1BQ86YN6 1023 aaKnown RBP20.15■□□□□ 0.82
PCNX4-202ENST00000391611 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
PCNX4-202ENST00000391611 ZEB1P37275 1124 aaPredicted RBP20.02■□□□□ 0.79
PCNX4-202ENST00000391611 APLP2Q06481 763 aa20■□□□□ 0.79
PCNX4-202ENST00000391611 RANGAP1P46060 587 aaPredicted RBP19.99■□□□□ 0.79
PCNX4-202ENST00000391611 TRIM26Q12899 539 aaPredicted RBP19.95■□□□□ 0.78
PCNX4-202ENST00000391611 CENPBP07199 599 aaPredicted RBP19.81■□□□□ 0.76
PCNX4-202ENST00000391611 UBTFP17480 764 aaKnown RBP19.79■□□□□ 0.76
PCNX4-202ENST00000391611 YTHDC1Q96MU7 727 aaKnown RBP19.74■□□□□ 0.75
PCNX4-202ENST00000391611 PELP1Q8IZL8 1130 aaKnown RBP19.7■□□□□ 0.74
PCNX4-202ENST00000391611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.72
PCNX4-202ENST00000391611 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
PCNX4-202ENST00000391611 HNRNPUL2Q1KMD3 747 aaKnown RBP19.39■□□□□ 0.69
PCNX4-202ENST00000391611 ITGAEP38570 1179 aa19.25■□□□□ 0.67
PCNX4-202ENST00000391611 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
PCNX4-202ENST00000391611 GTF3C3Q9Y5Q9 886 aa19.06■□□□□ 0.64
PCNX4-202ENST00000391611 NEFLP07196 543 aa19.04■□□□□ 0.64
PCNX4-202ENST00000391611 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
PCNX4-202ENST00000391611 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
PCNX4-202ENST00000391611 ABCC9O60706 1549 aa18.91■□□□□ 0.62
PCNX4-202ENST00000391611 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
PCNX4-202ENST00000391611 MYT1Q01538 1121 aa18.9■□□□□ 0.62
PCNX4-202ENST00000391611 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
PCNX4-202ENST00000391611 ACIN1Q9UKV3 1341 aaKnown RBP18.85■□□□□ 0.61
PCNX4-202ENST00000391611 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
PCNX4-202ENST00000391611 CNGB1Q14028 1251 aaPredicted RBP18.81■□□□□ 0.6
PCNX4-202ENST00000391611 ZNF316A6NFI3 1004 aaPredicted RBP18.79■□□□□ 0.6
PCNX4-202ENST00000391611 POLR3GLQ9BT43 218 aa18.72■□□□□ 0.59
PCNX4-202ENST00000391611 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
PCNX4-202ENST00000391611 BCANQ96GW7 911 aa18.71■□□□□ 0.59
PCNX4-202ENST00000391611 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
PCNX4-202ENST00000391611 NEUROD1Q13562 356 aa18.7■□□□□ 0.58
PCNX4-202ENST00000391611 FAM50AQ14320 339 aaKnown RBP18.67■□□□□ 0.58
PCNX4-202ENST00000391611 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
PCNX4-202ENST00000391611 P3H3Q8IVL6 736 aa18.45■□□□□ 0.54
PCNX4-202ENST00000391611 MIER1Q8N108 512 aa18.42■□□□□ 0.54
PCNX4-202ENST00000391611 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.53
PCNX4-202ENST00000391611 TRIM52Q96A61 297 aa18.39■□□□□ 0.53
PCNX4-202ENST00000391611 ANP32CO43423 234 aa18.35■□□□□ 0.53
PCNX4-202ENST00000391611 DDX10Q13206 875 aaKnown RBP18.27■□□□□ 0.52
PCNX4-202ENST00000391611 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
PCNX4-202ENST00000391611 ZNF326Q5BKZ1 582 aaKnown RBP18.23■□□□□ 0.51
PCNX4-202ENST00000391611 FKBP8Q14318 412 aa18.23■□□□□ 0.51
PCNX4-202ENST00000391611 CCDC180Q9P1Z9 1646 aa18.21■□□□□ 0.51
PCNX4-202ENST00000391611 HIRIP3Q9BW71 556 aaPredicted RBP18.19■□□□□ 0.5
PCNX4-202ENST00000391611 DAXXQ9UER7 740 aaPredicted RBP18.16■□□□□ 0.5
PCNX4-202ENST00000391611 MYT1LQ9UL68 1186 aa18.16■□□□□ 0.5
PCNX4-202ENST00000391611 CDK11AQ9UQ88 783 aaPredicted RBP18.14■□□□□ 0.5
PCNX4-202ENST00000391611 CEP162Q5TB80 1403 aa18.14■□□□□ 0.49
PCNX4-202ENST00000391611 CLIP1P30622 1438 aa18.08■□□□□ 0.48
PCNX4-202ENST00000391611 RTL5Q5HYW3 569 aaPredicted RBP18.06■□□□□ 0.48
PCNX4-202ENST00000391611 HNRNPUQ00839 825 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCNX4-202ENST00000391611 CECR2Q9BXF3 1484 aa18.04■□□□□ 0.48
PCNX4-202ENST00000391611 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
PCNX4-202ENST00000391611 IRX6P78412 446 aaPredicted RBP17.98■□□□□ 0.47
PCNX4-202ENST00000391611 TONSLQ96HA7 1378 aa17.97■□□□□ 0.47
PCNX4-202ENST00000391611 FAM9BQ8IZU0 186 aa17.97■□□□□ 0.47
PCNX4-202ENST00000391611 CHIC2Q9UKJ5 165 aa17.97■□□□□ 0.47
PCNX4-202ENST00000391611 CLSPNQ9HAW4 1339 aa17.96■□□□□ 0.47
PCNX4-202ENST00000391611 FBLN2P98095 1184 aa17.95■□□□□ 0.46
PCNX4-202ENST00000391611 TNIKQ9UKE5 1360 aa17.94■□□□□ 0.46
PCNX4-202ENST00000391611 SOGA1O94964 1423 aa17.92■□□□□ 0.46
PCNX4-202ENST00000391611 ZNF777Q9ULD5 760 aaPredicted RBP17.91■□□□□ 0.46
PCNX4-202ENST00000391611 GOLGA3Q08378 1498 aa17.89■□□□□ 0.45
PCNX4-202ENST00000391611 RB1CC1Q8TDY2 1594 aa17.88■□□□□ 0.45
PCNX4-202ENST00000391611 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
PCNX4-202ENST00000391611 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
PCNX4-202ENST00000391611 SIN3AQ96ST3 1273 aa17.84■□□□□ 0.45
PCNX4-202ENST00000391611 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
PCNX4-202ENST00000391611 SENP3-EIF4A1A0A087X0R7 540 aa17.83■□□□□ 0.44
PCNX4-202ENST00000391611 EEA1Q15075 1411 aa17.82■□□□□ 0.44
PCNX4-202ENST00000391611 SUPT16HQ9Y5B9 1047 aaKnown RBP17.77■□□□□ 0.44
PCNX4-202ENST00000391611 MRS2Q9HD23 443 aa17.77■□□□□ 0.43
PCNX4-202ENST00000391611 RRP7BPQ9NSQ0 103 aa17.76■□□□□ 0.43
PCNX4-202ENST00000391611 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
PCNX4-202ENST00000391611 ANP32AP39687 249 aaKnown RBP17.74■□□□□ 0.43
PCNX4-202ENST00000391611 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
PCNX4-202ENST00000391611 ABCC8Q09428 1581 aa17.71■□□□□ 0.43
PCNX4-202ENST00000391611 MTUS2Q5JR59 1369 aa17.7■□□□□ 0.42
PCNX4-202ENST00000391611 NBR1Q14596 966 aa17.7■□□□□ 0.42
PCNX4-202ENST00000391611 KANK4Q5T7N3 995 aaPredicted RBP17.7■□□□□ 0.42
PCNX4-202ENST00000391611 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
PCNX4-202ENST00000391611 CCDC136Q96JN2 1154 aa17.67■□□□□ 0.42
PCNX4-202ENST00000391611 TMC1Q8TDI8 760 aa17.65■□□□□ 0.42
PCNX4-202ENST00000391611 KDM2AQ9Y2K7 1162 aa17.65■□□□□ 0.42
PCNX4-202ENST00000391611 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
PCNX4-202ENST00000391611 EIF4G2P78344 907 aaKnown RBP eCLIP17.63■□□□□ 0.41
PCNX4-202ENST00000391611 ANP32EQ9BTT0 268 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8384.3 ms