RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 AEBP2Q6ZN18 517 aaPredicted RBP34.11■■■■□ 3.05
SFXN4-208ENST00000490417 CHIC1Q5VXU3 224 aa33.39■■■□□ 2.94
SFXN4-208ENST00000490417 NISCHQ9Y2I1 1504 aa32.95■■■□□ 2.87
SFXN4-208ENST00000490417 PHF23Q9BUL5 403 aaPredicted RBP29.41■■■□□ 2.3
SFXN4-208ENST00000490417 CCDC180Q9P1Z9 1646 aa29.37■■■□□ 2.29
SFXN4-208ENST00000490417 ABCC9O60706 1549 aa28.92■■■□□ 2.22
SFXN4-208ENST00000490417 SENP3Q9H4L4 574 aaPredicted RBP28.87■■■□□ 2.21
SFXN4-208ENST00000490417 RB1CC1Q8TDY2 1594 aa27.81■■■□□ 2.04
SFXN4-208ENST00000490417 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
SFXN4-208ENST00000490417 NACADO15069 1562 aa27.73■■■□□ 2.03
SFXN4-208ENST00000490417 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
SFXN4-208ENST00000490417 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
SFXN4-208ENST00000490417 DCAF1Q9Y4B6 1507 aa27.3■■□□□ 1.96
SFXN4-208ENST00000490417 PLPPR3Q6T4P5 718 aa27.16■■□□□ 1.94
SFXN4-208ENST00000490417 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
SFXN4-208ENST00000490417 UNC13AQ9UPW8 1703 aa26.96■■□□□ 1.91
SFXN4-208ENST00000490417 FOXD1Q16676 465 aa26.83■■□□□ 1.89
SFXN4-208ENST00000490417 BICRAQ9NZM4 1560 aa26.8■■□□□ 1.88
SFXN4-208ENST00000490417 SCRIBQ14160 1630 aa26.74■■□□□ 1.87
SFXN4-208ENST00000490417 SHROOM4Q9ULL8 1493 aa26.73■■□□□ 1.87
SFXN4-208ENST00000490417 DNAJC5BQ9UF47 199 aa26.64■■□□□ 1.86
SFXN4-208ENST00000490417 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.79
SFXN4-208ENST00000490417 CC2D2AQ9P2K1 1620 aa26.13■■□□□ 1.77
SFXN4-208ENST00000490417 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
SFXN4-208ENST00000490417 ADRA2BP18089 450 aa25.95■■□□□ 1.74
SFXN4-208ENST00000490417 PPP6R1Q9UPN7 881 aa25.94■■□□□ 1.74
SFXN4-208ENST00000490417 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
SFXN4-208ENST00000490417 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
SFXN4-208ENST00000490417 SMARCA4P51532 1647 aa25.57■■□□□ 1.68
SFXN4-208ENST00000490417 SMARCA2P51531 1590 aa25.55■■□□□ 1.68
SFXN4-208ENST00000490417 ATAD2BQ9ULI0 1458 aa25.52■■□□□ 1.68
SFXN4-208ENST00000490417 HMGXB3Q12766 1538 aa25.41■■□□□ 1.66
SFXN4-208ENST00000490417 PIAS4Q8N2W9 510 aaPredicted RBP25.36■■□□□ 1.65
SFXN4-208ENST00000490417 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
SFXN4-208ENST00000490417 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
SFXN4-208ENST00000490417 MROH2BQ7Z745 1585 aa25.32■■□□□ 1.64
SFXN4-208ENST00000490417 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
SFXN4-208ENST00000490417 WIZO95785 1651 aa25.03■■□□□ 1.6
SFXN4-208ENST00000490417 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
SFXN4-208ENST00000490417 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
SFXN4-208ENST00000490417 NESP48681 1621 aa24.91■■□□□ 1.58
SFXN4-208ENST00000490417 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
SFXN4-208ENST00000490417 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
SFXN4-208ENST00000490417 CUX2O14529 1486 aa24.84■■□□□ 1.57
SFXN4-208ENST00000490417 TOP2AP11388 1531 aaKnown RBP24.82■■□□□ 1.56
SFXN4-208ENST00000490417 MSH5O43196 834 aa24.64■■□□□ 1.54
SFXN4-208ENST00000490417 CFTRP13569 1480 aa24.62■■□□□ 1.53
SFXN4-208ENST00000490417 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
SFXN4-208ENST00000490417 THOC2Q8NI27 1593 aaKnown RBP24.56■■□□□ 1.52
SFXN4-208ENST00000490417 CEP164Q9UPV0 1460 aa24.54■■□□□ 1.52
SFXN4-208ENST00000490417 MRC2Q9UBG0 1479 aa24.53■■□□□ 1.52
SFXN4-208ENST00000490417 CCDC88BA6NC98 1476 aa24.52■■□□□ 1.52
SFXN4-208ENST00000490417 FANCD2Q9BXW9 1451 aa24.52■■□□□ 1.52
SFXN4-208ENST00000490417 WDR62O43379 1518 aa24.41■■□□□ 1.5
SFXN4-208ENST00000490417 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
SFXN4-208ENST00000490417 PRDM2Q13029 1718 aa24.33■■□□□ 1.49
SFXN4-208ENST00000490417 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
SFXN4-208ENST00000490417 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
SFXN4-208ENST00000490417 URB2Q14146 1524 aaKnown RBP24.21■■□□□ 1.47
SFXN4-208ENST00000490417 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
SFXN4-208ENST00000490417 IFT140Q96RY7 1462 aa24.06■■□□□ 1.44
SFXN4-208ENST00000490417 DNMBPQ6XZF7 1577 aa24.05■■□□□ 1.44
SFXN4-208ENST00000490417 PPP4R3CPQ6ZMV5 832 aa23.99■■□□□ 1.43
SFXN4-208ENST00000490417 OSCARQ8IYS5 282 aa23.87■■□□□ 1.41
SFXN4-208ENST00000490417 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
SFXN4-208ENST00000490417 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
SFXN4-208ENST00000490417 SOGA1O94964 1423 aa23.84■■□□□ 1.41
SFXN4-208ENST00000490417 FGD5Q6ZNL6 1462 aa23.78■■□□□ 1.4
SFXN4-208ENST00000490417 CUX1P39880 1505 aa23.78■■□□□ 1.4
SFXN4-208ENST00000490417 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
SFXN4-208ENST00000490417 EIF4G3O43432 1585 aaKnown RBP23.74■■□□□ 1.39
SFXN4-208ENST00000490417 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.39
SFXN4-208ENST00000490417 RAD54L2Q9Y4B4 1467 aa23.74■■□□□ 1.39
SFXN4-208ENST00000490417 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
SFXN4-208ENST00000490417 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
SFXN4-208ENST00000490417 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
SFXN4-208ENST00000490417 SCAF1Q9H7N4 1312 aaKnown RBP23.64■■□□□ 1.38
SFXN4-208ENST00000490417 FBLN2P98095 1184 aa23.62■■□□□ 1.37
SFXN4-208ENST00000490417 KCNA4P22459 653 aa23.61■■□□□ 1.37
SFXN4-208ENST00000490417 GRIN2BQ13224 1484 aa23.58■■□□□ 1.37
SFXN4-208ENST00000490417 TOP2BQ02880 1626 aa23.57■■□□□ 1.36
SFXN4-208ENST00000490417 ABCA10Q8WWZ4 1543 aa23.57■■□□□ 1.36
SFXN4-208ENST00000490417 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
SFXN4-208ENST00000490417 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
SFXN4-208ENST00000490417 MAGI1Q96QZ7 1491 aaPredicted RBP23.54■■□□□ 1.36
SFXN4-208ENST00000490417 BIVM-ERCC5R4GMW8 1640 aa23.53■■□□□ 1.36
SFXN4-208ENST00000490417 MAPK8IP2Q13387 824 aaPredicted RBP23.52■■□□□ 1.36
SFXN4-208ENST00000490417 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
SFXN4-208ENST00000490417 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
SFXN4-208ENST00000490417 CHD1O14646 1710 aa23.45■■□□□ 1.34
SFXN4-208ENST00000490417 SYNJ2O15056 1496 aa23.44■■□□□ 1.34
SFXN4-208ENST00000490417 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
SFXN4-208ENST00000490417 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
SFXN4-208ENST00000490417 PBRM1Q86U86 1689 aa23.39■■□□□ 1.34
SFXN4-208ENST00000490417 NCBP3Q53F19 620 aaKnown RBP23.36■■□□□ 1.33
SFXN4-208ENST00000490417 ARHGEF11O15085 1522 aa23.32■■□□□ 1.32
SFXN4-208ENST00000490417 ERICH3Q5RHP9 1530 aa23.31■■□□□ 1.32
SFXN4-208ENST00000490417 RIMBP3CA6NJZ7 1639 aa23.3■■□□□ 1.32
SFXN4-208ENST00000490417 RIMBP3BA6NNM3 1639 aa23.3■■□□□ 1.32
SFXN4-208ENST00000490417 RIMBP3Q9UFD9 1639 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms