RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 NISCHQ9Y2I1 1504 aa24.55■■□□□ 1.52
ERGIC3-207ENST00000438317 ABCC9O60706 1549 aa22.65■■□□□ 1.22
ERGIC3-207ENST00000438317 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
ERGIC3-207ENST00000438317 DNAJC5BQ9UF47 199 aa21.74■■□□□ 1.07
ERGIC3-207ENST00000438317 RB1CC1Q8TDY2 1594 aa21.33■■□□□ 1.01
ERGIC3-207ENST00000438317 NACADO15069 1562 aa21.09■□□□□ 0.97
ERGIC3-207ENST00000438317 PABPN1Q86U42 306 aaKnown RBP eCLIP21.05■□□□□ 0.96
ERGIC3-207ENST00000438317 DCAF8L2P0C7V8 631 aa20.89■□□□□ 0.93
ERGIC3-207ENST00000438317 UNC13AQ9UPW8 1703 aa20.88■□□□□ 0.93
ERGIC3-207ENST00000438317 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
ERGIC3-207ENST00000438317 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
ERGIC3-207ENST00000438317 CECR2Q9BXF3 1484 aa20.44■□□□□ 0.86
ERGIC3-207ENST00000438317 CC2D2AQ9P2K1 1620 aa20.44■□□□□ 0.86
ERGIC3-207ENST00000438317 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
ERGIC3-207ENST00000438317 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
ERGIC3-207ENST00000438317 DNAJC5Q9H3Z4 198 aa20.25■□□□□ 0.83
ERGIC3-207ENST00000438317 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
ERGIC3-207ENST00000438317 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
ERGIC3-207ENST00000438317 SCRIBQ14160 1630 aa20.18■□□□□ 0.82
ERGIC3-207ENST00000438317 CUX2O14529 1486 aa19.69■□□□□ 0.74
ERGIC3-207ENST00000438317 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
ERGIC3-207ENST00000438317 NCAPD3P42695 1498 aa19.52■□□□□ 0.72
ERGIC3-207ENST00000438317 ATAD2BQ9ULI0 1458 aa19.39■□□□□ 0.69
ERGIC3-207ENST00000438317 NESP48681 1621 aa19.36■□□□□ 0.69
ERGIC3-207ENST00000438317 HMGXB3Q12766 1538 aa19.29■□□□□ 0.68
ERGIC3-207ENST00000438317 SMARCA2P51531 1590 aa19.26■□□□□ 0.67
ERGIC3-207ENST00000438317 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
ERGIC3-207ENST00000438317 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
ERGIC3-207ENST00000438317 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
ERGIC3-207ENST00000438317 SUPT5HO00267 1087 aaKnown RBP19.12■□□□□ 0.65
ERGIC3-207ENST00000438317 TRIM41Q8WV44 630 aa19.12■□□□□ 0.65
ERGIC3-207ENST00000438317 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
ERGIC3-207ENST00000438317 PEG3Q9GZU2 1588 aa19.06■□□□□ 0.64
ERGIC3-207ENST00000438317 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
ERGIC3-207ENST00000438317 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
ERGIC3-207ENST00000438317 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
ERGIC3-207ENST00000438317 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
ERGIC3-207ENST00000438317 CADPSQ9ULU8 1353 aa18.89■□□□□ 0.61
ERGIC3-207ENST00000438317 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
ERGIC3-207ENST00000438317 WDR62O43379 1518 aa18.85■□□□□ 0.61
ERGIC3-207ENST00000438317 OSCARQ8IYS5 282 aa18.74■□□□□ 0.59
ERGIC3-207ENST00000438317 CEP164Q9UPV0 1460 aa18.69■□□□□ 0.58
ERGIC3-207ENST00000438317 WIZO95785 1651 aa18.66■□□□□ 0.58
ERGIC3-207ENST00000438317 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
ERGIC3-207ENST00000438317 CFTRP13569 1480 aa18.58■□□□□ 0.57
ERGIC3-207ENST00000438317 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
ERGIC3-207ENST00000438317 URB2Q14146 1524 aaKnown RBP18.56■□□□□ 0.56
ERGIC3-207ENST00000438317 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
ERGIC3-207ENST00000438317 RIMBP3CA6NJZ7 1639 aa18.53■□□□□ 0.56
ERGIC3-207ENST00000438317 RIMBP3BA6NNM3 1639 aa18.53■□□□□ 0.56
ERGIC3-207ENST00000438317 RIMBP3Q9UFD9 1639 aa18.53■□□□□ 0.56
ERGIC3-207ENST00000438317 ARHGEF11O15085 1522 aa18.43■□□□□ 0.54
ERGIC3-207ENST00000438317 ZNF608Q9ULD9 1512 aaPredicted RBP18.41■□□□□ 0.54
ERGIC3-207ENST00000438317 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
ERGIC3-207ENST00000438317 IFT140Q96RY7 1462 aa18.36■□□□□ 0.53
ERGIC3-207ENST00000438317 CYB5RLQ6IPT4 315 aa18.33■□□□□ 0.52
ERGIC3-207ENST00000438317 PRDM2Q13029 1718 aa18.3■□□□□ 0.52
ERGIC3-207ENST00000438317 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
ERGIC3-207ENST00000438317 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
ERGIC3-207ENST00000438317 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
ERGIC3-207ENST00000438317 ARAP1Q96P48 1450 aa18.22■□□□□ 0.51
ERGIC3-207ENST00000438317 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
ERGIC3-207ENST00000438317 CHD1O14646 1710 aa18.18■□□□□ 0.5
ERGIC3-207ENST00000438317 AQRO60306 1485 aaKnown RBP eCLIP18.18■□□□□ 0.53e-8■■■■□ 19.7
ERGIC3-207ENST00000438317 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
ERGIC3-207ENST00000438317 TARBP1Q13395 1621 aaKnown RBP18.15■□□□□ 0.5
ERGIC3-207ENST00000438317 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
ERGIC3-207ENST00000438317 FBLN2P98095 1184 aa18.1■□□□□ 0.49
ERGIC3-207ENST00000438317 POLA1P09884 1462 aaPredicted RBP18.05■□□□□ 0.48
ERGIC3-207ENST00000438317 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
ERGIC3-207ENST00000438317 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
ERGIC3-207ENST00000438317 TDRD9Q8NDG6 1382 aaKnown RBP18■□□□□ 0.47
ERGIC3-207ENST00000438317 CLASP1Q7Z460 1538 aa17.99■□□□□ 0.47
ERGIC3-207ENST00000438317 SOGA1O94964 1423 aa17.96■□□□□ 0.47
ERGIC3-207ENST00000438317 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
ERGIC3-207ENST00000438317 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
ERGIC3-207ENST00000438317 SYNJ1O43426 1573 aa17.9■□□□□ 0.46
ERGIC3-207ENST00000438317 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
ERGIC3-207ENST00000438317 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
ERGIC3-207ENST00000438317 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
ERGIC3-207ENST00000438317 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
ERGIC3-207ENST00000438317 GRIN2BQ13224 1484 aa17.84■□□□□ 0.45
ERGIC3-207ENST00000438317 SYNJ2O15056 1496 aa17.83■□□□□ 0.45
ERGIC3-207ENST00000438317 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
ERGIC3-207ENST00000438317 CUX1P39880 1505 aa17.79■□□□□ 0.44
ERGIC3-207ENST00000438317 PBRM1Q86U86 1689 aa17.72■□□□□ 0.43
ERGIC3-207ENST00000438317 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
ERGIC3-207ENST00000438317 ABCA5Q8WWZ7 1642 aa17.65■□□□□ 0.42
ERGIC3-207ENST00000438317 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
ERGIC3-207ENST00000438317 GRIN2AQ12879 1464 aa17.62■□□□□ 0.41
ERGIC3-207ENST00000438317 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
ERGIC3-207ENST00000438317 CEP170Q5SW79 1584 aa17.61■□□□□ 0.41
ERGIC3-207ENST00000438317 NUP160Q12769 1436 aa17.59■□□□□ 0.41
ERGIC3-207ENST00000438317 KIF13AQ9H1H9 1805 aa17.57■□□□□ 0.4
ERGIC3-207ENST00000438317 SHROOM2Q13796 1616 aa17.55■□□□□ 0.4
ERGIC3-207ENST00000438317 ADAMTS12P58397 1594 aa17.53■□□□□ 0.4
ERGIC3-207ENST00000438317 PCGF6Q9BYE7 350 aa17.52■□□□□ 0.4
ERGIC3-207ENST00000438317 EEA1Q15075 1411 aa17.51■□□□□ 0.39
ERGIC3-207ENST00000438317 TRIM26Q12899 539 aaPredicted RBP17.5■□□□□ 0.39
ERGIC3-207ENST00000438317 FHAD1B1AJZ9 1412 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms