RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 NISCHQ9Y2I1 1504 aa29.19■■■□□ 2.26
A1CF-203ENST00000373995 CCDC180Q9P1Z9 1646 aa25.76■■□□□ 1.71
A1CF-203ENST00000373995 ABCC9O60706 1549 aa24.81■■□□□ 1.56
A1CF-203ENST00000373995 ZCCHC6Q5VYS8 1495 aaKnown RBP24.41■■□□□ 1.5
A1CF-203ENST00000373995 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
A1CF-203ENST00000373995 MYO15BQ96JP2 1530 aa24.16■■□□□ 1.46
A1CF-203ENST00000373995 NACADO15069 1562 aa24.13■■□□□ 1.45
A1CF-203ENST00000373995 DCAF8L2P0C7V8 631 aa24.12■■□□□ 1.45
A1CF-203ENST00000373995 RB1CC1Q8TDY2 1594 aa24.04■■□□□ 1.44
A1CF-203ENST00000373995 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
A1CF-203ENST00000373995 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
A1CF-203ENST00000373995 BICRAQ9NZM4 1560 aa23.34■■□□□ 1.33
A1CF-203ENST00000373995 PABPN1Q86U42 306 aaKnown RBP eCLIP23.24■■□□□ 1.31
A1CF-203ENST00000373995 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
A1CF-203ENST00000373995 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
A1CF-203ENST00000373995 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
A1CF-203ENST00000373995 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.21
A1CF-203ENST00000373995 SMARCA4P51532 1647 aa22.55■■□□□ 1.2
A1CF-203ENST00000373995 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
A1CF-203ENST00000373995 CC2D2AQ9P2K1 1620 aa22.47■■□□□ 1.19
A1CF-203ENST00000373995 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
A1CF-203ENST00000373995 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
A1CF-203ENST00000373995 PEG3Q9GZU2 1588 aa22.37■■□□□ 1.17
A1CF-203ENST00000373995 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
A1CF-203ENST00000373995 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
A1CF-203ENST00000373995 NCAPD3P42695 1498 aa22.29■■□□□ 1.16
A1CF-203ENST00000373995 WIZO95785 1651 aa22.25■■□□□ 1.15
A1CF-203ENST00000373995 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
A1CF-203ENST00000373995 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
A1CF-203ENST00000373995 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
A1CF-203ENST00000373995 SUPT5HO00267 1087 aaKnown RBP22.04■■□□□ 1.12
A1CF-203ENST00000373995 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
A1CF-203ENST00000373995 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.05
A1CF-203ENST00000373995 CFTRP13569 1480 aa21.61■■□□□ 1.05
A1CF-203ENST00000373995 LAMC3Q9Y6N6 1575 aa21.6■■□□□ 1.05
A1CF-203ENST00000373995 NESP48681 1621 aa21.6■■□□□ 1.05
A1CF-203ENST00000373995 MYT1Q01538 1121 aa21.5■■□□□ 1.03
A1CF-203ENST00000373995 PELP1Q8IZL8 1130 aaKnown RBP21.45■■□□□ 1.03
A1CF-203ENST00000373995 PDS5BQ9NTI5 1447 aa21.44■■□□□ 1.02
A1CF-203ENST00000373995 PRDM2Q13029 1718 aa21.42■■□□□ 1.02
A1CF-203ENST00000373995 FANCD2Q9BXW9 1451 aa21.37■■□□□ 1.01
A1CF-203ENST00000373995 KIF21AQ7Z4S6 1674 aa21.33■■□□□ 1.01
A1CF-203ENST00000373995 ERCC6Q03468 1493 aa21.32■■□□□ 1
A1CF-203ENST00000373995 CEP164Q9UPV0 1460 aa21.3■■□□□ 1
A1CF-203ENST00000373995 SLC24A1O60721 1099 aa21.2■□□□□ 0.98
A1CF-203ENST00000373995 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
A1CF-203ENST00000373995 THOC2Q8NI27 1593 aaKnown RBP21.19■□□□□ 0.98
A1CF-203ENST00000373995 URB2Q14146 1524 aaKnown RBP21.15■□□□□ 0.98
A1CF-203ENST00000373995 WDR62O43379 1518 aa21.14■□□□□ 0.97
A1CF-203ENST00000373995 ABCC8Q09428 1581 aa21.11■□□□□ 0.97
A1CF-203ENST00000373995 DNMBPQ6XZF7 1577 aa21.09■□□□□ 0.97
A1CF-203ENST00000373995 TOPBP1Q92547 1522 aa21.08■□□□□ 0.97
A1CF-203ENST00000373995 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.97
A1CF-203ENST00000373995 CUX1P39880 1505 aa21.08■□□□□ 0.96
A1CF-203ENST00000373995 TTBK1Q5TCY1 1321 aaPredicted RBP21.05■□□□□ 0.96
A1CF-203ENST00000373995 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
A1CF-203ENST00000373995 TOP2BQ02880 1626 aa21■□□□□ 0.95
A1CF-203ENST00000373995 CUX2O14529 1486 aa21■□□□□ 0.95
A1CF-203ENST00000373995 BIVM-ERCC5R4GMW8 1640 aa20.99■□□□□ 0.95
A1CF-203ENST00000373995 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
A1CF-203ENST00000373995 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
A1CF-203ENST00000373995 IFT140Q96RY7 1462 aa20.85■□□□□ 0.93
A1CF-203ENST00000373995 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
A1CF-203ENST00000373995 TARBP1Q13395 1621 aaKnown RBP20.84■□□□□ 0.93
A1CF-203ENST00000373995 SOGA1O94964 1423 aa20.84■□□□□ 0.93
A1CF-203ENST00000373995 RAD54L2Q9Y4B4 1467 aa20.83■□□□□ 0.92
A1CF-203ENST00000373995 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
A1CF-203ENST00000373995 ABCA10Q8WWZ4 1543 aa20.77■□□□□ 0.92
A1CF-203ENST00000373995 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
A1CF-203ENST00000373995 ZNF608Q9ULD9 1512 aaPredicted RBP20.74■□□□□ 0.91
A1CF-203ENST00000373995 TDRD9Q8NDG6 1382 aaKnown RBP20.68■□□□□ 0.9
A1CF-203ENST00000373995 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
A1CF-203ENST00000373995 AQRO60306 1485 aaKnown RBP eCLIP20.66■□□□□ 0.94e-7■■■□□ 15.4
A1CF-203ENST00000373995 ABCA5Q8WWZ7 1642 aa20.65■□□□□ 0.9
A1CF-203ENST00000373995 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
A1CF-203ENST00000373995 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
A1CF-203ENST00000373995 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
A1CF-203ENST00000373995 RUSC2Q8N2Y8 1516 aa20.55■□□□□ 0.88
A1CF-203ENST00000373995 ERICH3Q5RHP9 1530 aa20.52■□□□□ 0.88
A1CF-203ENST00000373995 PBRM1Q86U86 1689 aa20.52■□□□□ 0.88
A1CF-203ENST00000373995 IGF1RP08069 1367 aa20.49■□□□□ 0.87
A1CF-203ENST00000373995 EEA1Q15075 1411 aa20.48■□□□□ 0.87
A1CF-203ENST00000373995 MAGI1Q96QZ7 1491 aaPredicted RBP20.47■□□□□ 0.87
A1CF-203ENST00000373995 SNAPC4Q5SXM2 1469 aa20.47■□□□□ 0.87
A1CF-203ENST00000373995 ADAMTS12P58397 1594 aa20.41■□□□□ 0.86
A1CF-203ENST00000373995 CUL7Q14999 1698 aa20.39■□□□□ 0.85
A1CF-203ENST00000373995 FHAD1B1AJZ9 1412 aa20.39■□□□□ 0.85
A1CF-203ENST00000373995 SYNJ2O15056 1496 aa20.38■□□□□ 0.85
A1CF-203ENST00000373995 CSRNP3Q8WYN3 585 aa20.38■□□□□ 0.85
A1CF-203ENST00000373995 CARMIL1Q5VZK9 1371 aa20.35■□□□□ 0.85
A1CF-203ENST00000373995 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
A1CF-203ENST00000373995 PRXQ9BXM0 1461 aa20.34■□□□□ 0.85
A1CF-203ENST00000373995 PRKCSHP14314 528 aaPredicted RBP20.31■□□□□ 0.84
A1CF-203ENST00000373995 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
A1CF-203ENST00000373995 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
A1CF-203ENST00000373995 CHD1O14646 1710 aa20.29■□□□□ 0.84
A1CF-203ENST00000373995 RAPGEF2Q9Y4G8 1499 aa20.28■□□□□ 0.84
A1CF-203ENST00000373995 FBLN2P98095 1184 aa20.27■□□□□ 0.84
A1CF-203ENST00000373995 KIF21BO75037 1637 aa20.24■□□□□ 0.83
A1CF-203ENST00000373995 NUP160Q12769 1436 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms