RNA–Protein interactions for RNA: ENST00000428458.1

PYGB-202, Transcript of glycogen phosphorylase B, humanhuman

TSL 3

Gene PYGB, Length 734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYGB-202ENST00000428458 NISCHQ9Y2I1 1504 aa28.66■■■□□ 2.18
PYGB-202ENST00000428458 ABCC9O60706 1549 aa26.07■■□□□ 1.76
PYGB-202ENST00000428458 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
PYGB-202ENST00000428458 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
PYGB-202ENST00000428458 RB1CC1Q8TDY2 1594 aa24.61■■□□□ 1.53
PYGB-202ENST00000428458 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
PYGB-202ENST00000428458 NACADO15069 1562 aa24.38■■□□□ 1.49
PYGB-202ENST00000428458 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.49
PYGB-202ENST00000428458 UNC13AQ9UPW8 1703 aa24.06■■□□□ 1.44
PYGB-202ENST00000428458 BICRAQ9NZM4 1560 aa23.94■■□□□ 1.42
PYGB-202ENST00000428458 MYO15BQ96JP2 1530 aa23.92■■□□□ 1.42
PYGB-202ENST00000428458 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
PYGB-202ENST00000428458 DCAF1Q9Y4B6 1507 aa23.57■■□□□ 1.36
PYGB-202ENST00000428458 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
PYGB-202ENST00000428458 CC2D2AQ9P2K1 1620 aa23.48■■□□□ 1.35
PYGB-202ENST00000428458 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
PYGB-202ENST00000428458 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
PYGB-202ENST00000428458 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
PYGB-202ENST00000428458 DNAJC5Q9H3Z4 198 aa22.74■■□□□ 1.23
PYGB-202ENST00000428458 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
PYGB-202ENST00000428458 ERCC6Q03468 1493 aa22.49■■□□□ 1.19
PYGB-202ENST00000428458 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
PYGB-202ENST00000428458 CUX2O14529 1486 aa22.42■■□□□ 1.18
PYGB-202ENST00000428458 SMARCA4P51532 1647 aa22.38■■□□□ 1.17
PYGB-202ENST00000428458 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
PYGB-202ENST00000428458 NESP48681 1621 aa22.35■■□□□ 1.17
PYGB-202ENST00000428458 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
PYGB-202ENST00000428458 BAZ1BQ9UIG0 1483 aaKnown RBP22.26■■□□□ 1.15
PYGB-202ENST00000428458 BAZ1AQ9NRL2 1556 aaPredicted RBP22.22■■□□□ 1.15
PYGB-202ENST00000428458 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
PYGB-202ENST00000428458 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
PYGB-202ENST00000428458 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
PYGB-202ENST00000428458 LAMC3Q9Y6N6 1575 aa22.04■■□□□ 1.12
PYGB-202ENST00000428458 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
PYGB-202ENST00000428458 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
PYGB-202ENST00000428458 CADPSQ9ULU8 1353 aa21.89■■□□□ 1.1
PYGB-202ENST00000428458 WIZO95785 1651 aa21.85■■□□□ 1.09
PYGB-202ENST00000428458 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.08
PYGB-202ENST00000428458 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
PYGB-202ENST00000428458 WDR62O43379 1518 aa21.7■■□□□ 1.07
PYGB-202ENST00000428458 CEP164Q9UPV0 1460 aa21.66■■□□□ 1.06
PYGB-202ENST00000428458 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.06
PYGB-202ENST00000428458 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
PYGB-202ENST00000428458 CFTRP13569 1480 aa21.58■■□□□ 1.04
PYGB-202ENST00000428458 TOP2AP11388 1531 aaKnown RBP21.5■■□□□ 1.03
PYGB-202ENST00000428458 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
PYGB-202ENST00000428458 URB2Q14146 1524 aaKnown RBP21.49■■□□□ 1.03
PYGB-202ENST00000428458 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
PYGB-202ENST00000428458 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
PYGB-202ENST00000428458 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
PYGB-202ENST00000428458 IFT140Q96RY7 1462 aa21.22■□□□□ 0.99
PYGB-202ENST00000428458 TOPBP1Q92547 1522 aa21.2■□□□□ 0.98
PYGB-202ENST00000428458 RIMBP3CA6NJZ7 1639 aa21.17■□□□□ 0.98
PYGB-202ENST00000428458 RIMBP3BA6NNM3 1639 aa21.17■□□□□ 0.98
PYGB-202ENST00000428458 RIMBP3Q9UFD9 1639 aa21.17■□□□□ 0.98
PYGB-202ENST00000428458 AQRO60306 1485 aaKnown RBP eCLIP21.1■□□□□ 0.97
PYGB-202ENST00000428458 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
PYGB-202ENST00000428458 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
PYGB-202ENST00000428458 ARHGEF11O15085 1522 aa21.08■□□□□ 0.96
PYGB-202ENST00000428458 DNMBPQ6XZF7 1577 aa21.07■□□□□ 0.96
PYGB-202ENST00000428458 FBLN2P98095 1184 aa21.07■□□□□ 0.96
PYGB-202ENST00000428458 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
PYGB-202ENST00000428458 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
PYGB-202ENST00000428458 POLA1P09884 1462 aaPredicted RBP20.98■□□□□ 0.95
PYGB-202ENST00000428458 RAD54L2Q9Y4B4 1467 aa20.97■□□□□ 0.95
PYGB-202ENST00000428458 CHD1O14646 1710 aa20.96■□□□□ 0.95
PYGB-202ENST00000428458 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
PYGB-202ENST00000428458 SOGA1O94964 1423 aa20.93■□□□□ 0.94
PYGB-202ENST00000428458 TRHP20396 242 aaPredicted RBP20.91■□□□□ 0.94
PYGB-202ENST00000428458 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
PYGB-202ENST00000428458 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.93
PYGB-202ENST00000428458 CHMP7Q8WUX9 453 aaPredicted RBP20.82■□□□□ 0.92
PYGB-202ENST00000428458 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
PYGB-202ENST00000428458 CUX1P39880 1505 aa20.79■□□□□ 0.92
PYGB-202ENST00000428458 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
PYGB-202ENST00000428458 CLASP1Q7Z460 1538 aa20.7■□□□□ 0.9
PYGB-202ENST00000428458 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
PYGB-202ENST00000428458 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
PYGB-202ENST00000428458 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
PYGB-202ENST00000428458 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
PYGB-202ENST00000428458 SYNJ2O15056 1496 aa20.66■□□□□ 0.9
PYGB-202ENST00000428458 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
PYGB-202ENST00000428458 PBRM1Q86U86 1689 aa20.58■□□□□ 0.89
PYGB-202ENST00000428458 ABCA10Q8WWZ4 1543 aa20.54■□□□□ 0.88
PYGB-202ENST00000428458 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
PYGB-202ENST00000428458 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
PYGB-202ENST00000428458 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
PYGB-202ENST00000428458 GRIN2AQ12879 1464 aa20.44■□□□□ 0.86
PYGB-202ENST00000428458 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
PYGB-202ENST00000428458 CEP170Q5SW79 1584 aa20.39■□□□□ 0.85
PYGB-202ENST00000428458 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
PYGB-202ENST00000428458 NUP160Q12769 1436 aa20.36■□□□□ 0.85
PYGB-202ENST00000428458 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
PYGB-202ENST00000428458 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
PYGB-202ENST00000428458 BIVM-ERCC5R4GMW8 1640 aa20.33■□□□□ 0.84
PYGB-202ENST00000428458 SHROOM2Q13796 1616 aa20.27■□□□□ 0.83
PYGB-202ENST00000428458 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.83
PYGB-202ENST00000428458 JPH4Q96JJ6 628 aa20.26■□□□□ 0.83
PYGB-202ENST00000428458 PRG4Q92954 1404 aaPredicted RBP20.26■□□□□ 0.83
PYGB-202ENST00000428458 FAM69CQ0P6D2 419 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms