Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXC2Q99958 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
FOXC2Q99958 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXC2Q99958 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXC2Q99958 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXC2Q99958 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
FOXC2Q99958 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.63■□□□□ 0.73
FOXC2Q99958 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXC2Q99958 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXC2Q99958 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXC2Q99958 AC090877.2-201ENST00000558441 1738 ntBASIC19.63■□□□□ 0.73
FOXC2Q99958 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXC2Q99958 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXC2Q99958 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.63■□□□□ 0.73
FOXC2Q99958 SERBP1P1-201ENST00000396021 1160 ntBASIC19.63■□□□□ 0.73
FOXC2Q99958 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.63■□□□□ 0.73
FOXC2Q99958 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.63■□□□□ 0.73
FOXC2Q99958 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.63■□□□□ 0.73
FOXC2Q99958 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXC2Q99958 AC022517.1-201ENST00000592429 346 ntBASIC19.63■□□□□ 0.73
FOXC2Q99958 AC008764.7-201ENST00000593779 1081 ntBASIC19.63■□□□□ 0.73
FOXC2Q99958 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXC2Q99958 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXC2Q99958 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.63■□□□□ 0.73
FOXC2Q99958 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXC2Q99958 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXC2Q99958 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
FOXC2Q99958 AC005703.6-201ENST00000623265 1329 ntBASIC19.62■□□□□ 0.73
FOXC2Q99958 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.62■□□□□ 0.73
FOXC2Q99958 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXC2Q99958 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXC2Q99958 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FOXC2Q99958 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXC2Q99958 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXC2Q99958 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.61■□□□□ 0.73
FOXC2Q99958 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FOXC2Q99958 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXC2Q99958 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXC2Q99958 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.61■□□□□ 0.73
FOXC2Q99958 IKBKGP1-201ENST00000612193 1073 ntBASIC19.61■□□□□ 0.73
FOXC2Q99958 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXC2Q99958 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXC2Q99958 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXC2Q99958 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXC2Q99958 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
FOXC2Q99958 DRD5P2-201ENST00000421395 2012 ntBASIC19.6■□□□□ 0.73
FOXC2Q99958 AC099791.1-201ENST00000416440 715 ntBASIC19.6■□□□□ 0.73
FOXC2Q99958 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.6■□□□□ 0.73
FOXC2Q99958 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.6■□□□□ 0.73
FOXC2Q99958 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.6■□□□□ 0.73
FOXC2Q99958 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXC2Q99958 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXC2Q99958 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXC2Q99958 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXC2Q99958 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXC2Q99958 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXC2Q99958 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXC2Q99958 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXC2Q99958 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.59■□□□□ 0.73
FOXC2Q99958 SLC47A1P1-202ENST00000449666 945 ntBASIC19.59■□□□□ 0.73
FOXC2Q99958 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXC2Q99958 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXC2Q99958 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.59■□□□□ 0.73
FOXC2Q99958 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXC2Q99958 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXC2Q99958 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
FOXC2Q99958 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXC2Q99958 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
FOXC2Q99958 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXC2Q99958 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.58■□□□□ 0.72
FOXC2Q99958 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXC2Q99958 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXC2Q99958 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.58■□□□□ 0.72
FOXC2Q99958 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXC2Q99958 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXC2Q99958 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.57■□□□□ 0.72
FOXC2Q99958 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
FOXC2Q99958 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.57■□□□□ 0.72
FOXC2Q99958 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXC2Q99958 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXC2Q99958 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.57■□□□□ 0.72
FOXC2Q99958 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXC2Q99958 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
FOXC2Q99958 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXC2Q99958 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXC2Q99958 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXC2Q99958 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXC2Q99958 ID1-201ENST00000376105 1233 ntBASIC19.56■□□□□ 0.72
FOXC2Q99958 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC2Q99958 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXC2Q99958 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXC2Q99958 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXC2Q99958 LINC01003-201ENST00000564834 1764 ntBASIC19.56■□□□□ 0.72
FOXC2Q99958 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC2Q99958 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
FOXC2Q99958 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXC2Q99958 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
FOXC2Q99958 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXC2Q99958 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
FOXC2Q99958 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms