RNA–Protein interactions for RNA: ENST00000568097.1

HERC2P4-206, Transcript of hect domain and RLD 2 pseudogene 4, humanhuman

TSL 5 BASIC

Gene HERC2P4, Length 1,062 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P4-206ENST00000568097 NISCHQ9Y2I1 1504 aa54.21■■■■■ 6.27
HERC2P4-206ENST00000568097 CCDC180Q9P1Z9 1646 aa48.32■■■■■ 5.33
HERC2P4-206ENST00000568097 ABCC9O60706 1549 aa48.02■■■■■ 5.28
HERC2P4-206ENST00000568097 RB1CC1Q8TDY2 1594 aa45.79■■■■■ 4.92
HERC2P4-206ENST00000568097 NACADO15069 1562 aa45.62■■■■■ 4.89
HERC2P4-206ENST00000568097 DCAF8L2P0C7V8 631 aa45.5■■■■■ 4.87
HERC2P4-206ENST00000568097 MYO15BQ96JP2 1530 aa45.17■■■■■ 4.82
HERC2P4-206ENST00000568097 ZCCHC6Q5VYS8 1495 aaKnown RBP45.04■■■■■ 4.8
HERC2P4-206ENST00000568097 PABPN1Q86U42 306 aaKnown RBP eCLIP44.84■■■■■ 4.77
HERC2P4-206ENST00000568097 DNAJC5BQ9UF47 199 aa44.8■■■■■ 4.76
HERC2P4-206ENST00000568097 DCAF1Q9Y4B6 1507 aa44.77■■■■■ 4.76
HERC2P4-206ENST00000568097 UNC13AQ9UPW8 1703 aa44.76■■■■■ 4.76
HERC2P4-206ENST00000568097 BICRAQ9NZM4 1560 aa44.59■■■■■ 4.73
HERC2P4-206ENST00000568097 SCRIBQ14160 1630 aa44.14■■■■■ 4.66
HERC2P4-206ENST00000568097 SHROOM4Q9ULL8 1493 aa43.9■■■■■ 4.62
HERC2P4-206ENST00000568097 EIF4G1Q04637 1599 aaKnown RBP43.39■■■■■ 4.54
HERC2P4-206ENST00000568097 CC2D2AQ9P2K1 1620 aa43.36■■■■■ 4.53
HERC2P4-206ENST00000568097 CECR2Q9BXF3 1484 aa43.19■■■■■ 4.51
HERC2P4-206ENST00000568097 NCAPD3P42695 1498 aa42.19■■■■■ 4.34
HERC2P4-206ENST00000568097 SMARCA4P51532 1647 aa42.15■■■■■ 4.34
HERC2P4-206ENST00000568097 ATAD2BQ9ULI0 1458 aa42.14■■■■■ 4.34
HERC2P4-206ENST00000568097 BAZ1AQ9NRL2 1556 aaPredicted RBP41.97■■■■■ 4.31
HERC2P4-206ENST00000568097 SMARCA2P51531 1590 aa41.94■■■■■ 4.3
HERC2P4-206ENST00000568097 HMGXB3Q12766 1538 aa41.86■■■■■ 4.29
HERC2P4-206ENST00000568097 MROH2BQ7Z745 1585 aa41.82■■■■■ 4.29
HERC2P4-206ENST00000568097 PEG3Q9GZU2 1588 aa41.76■■■■■ 4.27
HERC2P4-206ENST00000568097 BAZ1BQ9UIG0 1483 aaKnown RBP41.68■■■■■ 4.26
HERC2P4-206ENST00000568097 NESP48681 1621 aa41.43■■■■■ 4.22
HERC2P4-206ENST00000568097 ERCC6Q03468 1493 aa41.34■■■■■ 4.21
HERC2P4-206ENST00000568097 WIZO95785 1651 aa41.28■■■■■ 4.2
HERC2P4-206ENST00000568097 RSF1Q96T23 1441 aaPredicted RBP41.13■■■■■ 4.17
HERC2P4-206ENST00000568097 CUX2O14529 1486 aa41.13■■■■■ 4.17
HERC2P4-206ENST00000568097 LAMC3Q9Y6N6 1575 aa41.07■■■■■ 4.16
HERC2P4-206ENST00000568097 CADPSQ9ULU8 1353 aa40.92■■■■■ 4.14
HERC2P4-206ENST00000568097 THOC2Q8NI27 1593 aaKnown RBP40.85■■■■■ 4.13
HERC2P4-206ENST00000568097 PDS5BQ9NTI5 1447 aa40.84■■■■■ 4.13
HERC2P4-206ENST00000568097 TOP2AP11388 1531 aaKnown RBP40.78■■■■■ 4.12
HERC2P4-206ENST00000568097 KIF21AQ7Z4S6 1674 aa40.78■■■■■ 4.12
HERC2P4-206ENST00000568097 DNAJC5Q9H3Z4 198 aa40.67■■■■■ 4.1
HERC2P4-206ENST00000568097 CFTRP13569 1480 aa40.57■■■■■ 4.08
HERC2P4-206ENST00000568097 MRC2Q9UBG0 1479 aa40.5■■■■■ 4.07
HERC2P4-206ENST00000568097 FANCD2Q9BXW9 1451 aa40.45■■■■■ 4.07
HERC2P4-206ENST00000568097 CEP164Q9UPV0 1460 aa40.4■■■■■ 4.06
HERC2P4-206ENST00000568097 WDR62O43379 1518 aa40.4■■■■■ 4.06
HERC2P4-206ENST00000568097 CCDC88BA6NC98 1476 aa40.38■■■■■ 4.05
HERC2P4-206ENST00000568097 URB2Q14146 1524 aaKnown RBP40.14■■■■■ 4.02
HERC2P4-206ENST00000568097 PRDM2Q13029 1718 aa39.99■■■■□ 3.99
HERC2P4-206ENST00000568097 TOPBP1Q92547 1522 aa39.74■■■■□ 3.95
HERC2P4-206ENST00000568097 IFT140Q96RY7 1462 aa39.6■■■■□ 3.93
HERC2P4-206ENST00000568097 SUPT5HO00267 1087 aaKnown RBP39.59■■■■□ 3.93
HERC2P4-206ENST00000568097 ZNF608Q9ULD9 1512 aaPredicted RBP39.59■■■■□ 3.93
HERC2P4-206ENST00000568097 DNMBPQ6XZF7 1577 aa39.59■■■■□ 3.93
HERC2P4-206ENST00000568097 ABCC8Q09428 1581 aa39.57■■■■□ 3.92
HERC2P4-206ENST00000568097 POLA1P09884 1462 aaPredicted RBP39.38■■■■□ 3.9
HERC2P4-206ENST00000568097 TARBP1Q13395 1621 aaKnown RBP39.36■■■■□ 3.89
HERC2P4-206ENST00000568097 OSCARQ8IYS5 282 aa39.33■■■■□ 3.89
HERC2P4-206ENST00000568097 EIF4G3O43432 1585 aaKnown RBP39.29■■■■□ 3.88
HERC2P4-206ENST00000568097 AQRO60306 1485 aaKnown RBP eCLIP39.26■■■■□ 3.88
HERC2P4-206ENST00000568097 RAD54L2Q9Y4B4 1467 aa39.26■■■■□ 3.88
HERC2P4-206ENST00000568097 CUX1P39880 1505 aa39.25■■■■□ 3.87
HERC2P4-206ENST00000568097 FGD5Q6ZNL6 1462 aa39.18■■■■□ 3.86
HERC2P4-206ENST00000568097 SOGA1O94964 1423 aa39.17■■■■□ 3.86
HERC2P4-206ENST00000568097 TDRD9Q8NDG6 1382 aaKnown RBP39.09■■■■□ 3.85
HERC2P4-206ENST00000568097 TRIM41Q8WV44 630 aa39.04■■■■□ 3.84
HERC2P4-206ENST00000568097 WDR97A6NE52 1622 aa38.86■■■■□ 3.81
HERC2P4-206ENST00000568097 CHD1O14646 1710 aa38.85■■■■□ 3.81
HERC2P4-206ENST00000568097 SNAPC4Q5SXM2 1469 aa38.84■■■■□ 3.81
HERC2P4-206ENST00000568097 FBLN2P98095 1184 aa38.82■■■■□ 3.8
HERC2P4-206ENST00000568097 RIMBP3CA6NJZ7 1639 aa38.78■■■■□ 3.8
HERC2P4-206ENST00000568097 RIMBP3BA6NNM3 1639 aa38.78■■■■□ 3.8
HERC2P4-206ENST00000568097 RIMBP3Q9UFD9 1639 aa38.78■■■■□ 3.8
HERC2P4-206ENST00000568097 GRIN2BQ13224 1484 aa38.77■■■■□ 3.8
HERC2P4-206ENST00000568097 ABCA10Q8WWZ4 1543 aa38.76■■■■□ 3.8
HERC2P4-206ENST00000568097 ARHGEF11O15085 1522 aa38.74■■■■□ 3.79
HERC2P4-206ENST00000568097 WRNQ14191 1432 aaPredicted RBP eCLIP38.72■■■■□ 3.79
HERC2P4-206ENST00000568097 SYNJ1O43426 1573 aa38.7■■■■□ 3.79
HERC2P4-206ENST00000568097 MAGI1Q96QZ7 1491 aaPredicted RBP38.7■■■■□ 3.79
HERC2P4-206ENST00000568097 GAPVD1Q14C86 1478 aa38.69■■■■□ 3.78
HERC2P4-206ENST00000568097 TOP2BQ02880 1626 aa38.67■■■■□ 3.78
HERC2P4-206ENST00000568097 BIVM-ERCC5R4GMW8 1640 aa38.65■■■■□ 3.78
HERC2P4-206ENST00000568097 ABCA5Q8WWZ7 1642 aa38.64■■■■□ 3.78
HERC2P4-206ENST00000568097 CHMP7Q8WUX9 453 aaPredicted RBP38.61■■■■□ 3.77
HERC2P4-206ENST00000568097 SYNJ2O15056 1496 aa38.6■■■■□ 3.77
HERC2P4-206ENST00000568097 PBRM1Q86U86 1689 aa38.56■■■■□ 3.76
HERC2P4-206ENST00000568097 CLASP1Q7Z460 1538 aa38.53■■■■□ 3.76
HERC2P4-206ENST00000568097 ARAP1Q96P48 1450 aa38.44■■■■□ 3.74
HERC2P4-206ENST00000568097 CYB5RLQ6IPT4 315 aa38.43■■■■□ 3.74
HERC2P4-206ENST00000568097 ADAMTS12P58397 1594 aa38.31■■■■□ 3.72
HERC2P4-206ENST00000568097 GRIN2AQ12879 1464 aa38.28■■■■□ 3.72
HERC2P4-206ENST00000568097 ERICH3Q5RHP9 1530 aa38.23■■■■□ 3.71
HERC2P4-206ENST00000568097 FHAD1B1AJZ9 1412 aa38.22■■■■□ 3.71
HERC2P4-206ENST00000568097 NUP160Q12769 1436 aa38.18■■■■□ 3.7
HERC2P4-206ENST00000568097 CEP170Q5SW79 1584 aa38.16■■■■□ 3.7
HERC2P4-206ENST00000568097 ERCC6L2Q5T890 1561 aa38.02■■■■□ 3.68
HERC2P4-206ENST00000568097 IGF1RP08069 1367 aa37.96■■■■□ 3.67
HERC2P4-206ENST00000568097 KIF27Q86VH2 1401 aa37.92■■■■□ 3.66
HERC2P4-206ENST00000568097 SHROOM2Q13796 1616 aa37.91■■■■□ 3.66
HERC2P4-206ENST00000568097 TRHP20396 242 aaPredicted RBP37.77■■■■□ 3.64
HERC2P4-206ENST00000568097 RUSC2Q8N2Y8 1516 aa37.77■■■■□ 3.64
HERC2P4-206ENST00000568097 JPH4Q96JJ6 628 aa37.75■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms