RNA–Protein interactions for RNA: ENST00000521373.1

LINC01942-201, Transcript of long intergenic non-protein coding RNA 1942, humanhuman

TSL 4 BASIC

Gene LINC01942, Length 513 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01942-201ENST00000521373 NISCHQ9Y2I1 1504 aa53.86■■■■■ 6.21
LINC01942-201ENST00000521373 CCDC180Q9P1Z9 1646 aa48.36■■■■■ 5.33
LINC01942-201ENST00000521373 ABCC9O60706 1549 aa48.04■■■■■ 5.28
LINC01942-201ENST00000521373 RB1CC1Q8TDY2 1594 aa45.91■■■■■ 4.94
LINC01942-201ENST00000521373 NACADO15069 1562 aa45.64■■■■■ 4.9
LINC01942-201ENST00000521373 DCAF8L2P0C7V8 631 aa45.21■■■■■ 4.83
LINC01942-201ENST00000521373 MYO15BQ96JP2 1530 aa45.13■■■■■ 4.82
LINC01942-201ENST00000521373 DNAJC5BQ9UF47 199 aa44.9■■■■■ 4.78
LINC01942-201ENST00000521373 UNC13AQ9UPW8 1703 aa44.89■■■■■ 4.78
LINC01942-201ENST00000521373 PABPN1Q86U42 306 aaKnown RBP eCLIP44.69■■■■■ 4.74
LINC01942-201ENST00000521373 ZCCHC6Q5VYS8 1495 aaKnown RBP44.69■■■■■ 4.74
LINC01942-201ENST00000521373 DCAF1Q9Y4B6 1507 aa44.58■■■■■ 4.73
LINC01942-201ENST00000521373 BICRAQ9NZM4 1560 aa44.54■■■■■ 4.72
LINC01942-201ENST00000521373 SHROOM4Q9ULL8 1493 aa44.08■■■■■ 4.65
LINC01942-201ENST00000521373 SCRIBQ14160 1630 aa43.95■■■■■ 4.63
LINC01942-201ENST00000521373 CC2D2AQ9P2K1 1620 aa43.48■■■■■ 4.55
LINC01942-201ENST00000521373 EIF4G1Q04637 1599 aaKnown RBP43.44■■■■■ 4.54
LINC01942-201ENST00000521373 CECR2Q9BXF3 1484 aa43.3■■■■■ 4.52
LINC01942-201ENST00000521373 NCAPD3P42695 1498 aa42.11■■■■■ 4.33
LINC01942-201ENST00000521373 SMARCA4P51532 1647 aa42■■■■■ 4.31
LINC01942-201ENST00000521373 ATAD2BQ9ULI0 1458 aa41.98■■■■■ 4.31
LINC01942-201ENST00000521373 SMARCA2P51531 1590 aa41.91■■■■■ 4.3
LINC01942-201ENST00000521373 HMGXB3Q12766 1538 aa41.85■■■■■ 4.29
LINC01942-201ENST00000521373 BAZ1AQ9NRL2 1556 aaPredicted RBP41.83■■■■■ 4.29
LINC01942-201ENST00000521373 PEG3Q9GZU2 1588 aa41.65■■■■■ 4.26
LINC01942-201ENST00000521373 BAZ1BQ9UIG0 1483 aaKnown RBP41.58■■■■■ 4.25
LINC01942-201ENST00000521373 ERCC6Q03468 1493 aa41.5■■■■■ 4.23
LINC01942-201ENST00000521373 MROH2BQ7Z745 1585 aa41.47■■■■■ 4.23
LINC01942-201ENST00000521373 CUX2O14529 1486 aa41.46■■■■■ 4.23
LINC01942-201ENST00000521373 NESP48681 1621 aa41.32■■■■■ 4.2
LINC01942-201ENST00000521373 DNAJC5Q9H3Z4 198 aa41.18■■■■■ 4.18
LINC01942-201ENST00000521373 LAMC3Q9Y6N6 1575 aa41.17■■■■■ 4.18
LINC01942-201ENST00000521373 WIZO95785 1651 aa40.99■■■■■ 4.15
LINC01942-201ENST00000521373 THOC2Q8NI27 1593 aaKnown RBP40.97■■■■■ 4.15
LINC01942-201ENST00000521373 PDS5BQ9NTI5 1447 aa40.88■■■■■ 4.13
LINC01942-201ENST00000521373 KIF21AQ7Z4S6 1674 aa40.87■■■■■ 4.13
LINC01942-201ENST00000521373 CADPSQ9ULU8 1353 aa40.81■■■■■ 4.12
LINC01942-201ENST00000521373 RSF1Q96T23 1441 aaPredicted RBP40.67■■■■■ 4.1
LINC01942-201ENST00000521373 TOP2AP11388 1531 aaKnown RBP40.52■■■■■ 4.08
LINC01942-201ENST00000521373 MRC2Q9UBG0 1479 aa40.51■■■■■ 4.08
LINC01942-201ENST00000521373 WDR62O43379 1518 aa40.44■■■■■ 4.06
LINC01942-201ENST00000521373 CFTRP13569 1480 aa40.39■■■■■ 4.06
LINC01942-201ENST00000521373 CEP164Q9UPV0 1460 aa40.39■■■■■ 4.06
LINC01942-201ENST00000521373 FANCD2Q9BXW9 1451 aa40.33■■■■■ 4.05
LINC01942-201ENST00000521373 PRDM2Q13029 1718 aa40.09■■■■■ 4.01
LINC01942-201ENST00000521373 CCDC88BA6NC98 1476 aa40.01■■■■■ 4
LINC01942-201ENST00000521373 URB2Q14146 1524 aaKnown RBP40■■■■□ 3.99
LINC01942-201ENST00000521373 TOPBP1Q92547 1522 aa39.6■■■■□ 3.93
LINC01942-201ENST00000521373 IFT140Q96RY7 1462 aa39.59■■■■□ 3.93
LINC01942-201ENST00000521373 ABCC8Q09428 1581 aa39.58■■■■□ 3.93
LINC01942-201ENST00000521373 OSCARQ8IYS5 282 aa39.5■■■■□ 3.91
LINC01942-201ENST00000521373 DNMBPQ6XZF7 1577 aa39.5■■■■□ 3.91
LINC01942-201ENST00000521373 ZNF608Q9ULD9 1512 aaPredicted RBP39.45■■■■□ 3.91
LINC01942-201ENST00000521373 TRIM41Q8WV44 630 aa39.33■■■■□ 3.89
LINC01942-201ENST00000521373 EIF4G3O43432 1585 aaKnown RBP39.3■■■■□ 3.88
LINC01942-201ENST00000521373 TARBP1Q13395 1621 aaKnown RBP39.27■■■■□ 3.88
LINC01942-201ENST00000521373 POLA1P09884 1462 aaPredicted RBP39.2■■■■□ 3.87
LINC01942-201ENST00000521373 AQRO60306 1485 aaKnown RBP eCLIP39.1■■■■□ 3.85
LINC01942-201ENST00000521373 RIMBP3CA6NJZ7 1639 aa39.02■■■■□ 3.84
LINC01942-201ENST00000521373 RIMBP3BA6NNM3 1639 aa39.02■■■■□ 3.84
LINC01942-201ENST00000521373 RIMBP3Q9UFD9 1639 aa39.02■■■■□ 3.84
LINC01942-201ENST00000521373 RAD54L2Q9Y4B4 1467 aa39■■■■□ 3.83
LINC01942-201ENST00000521373 SOGA1O94964 1423 aa39■■■■□ 3.83
LINC01942-201ENST00000521373 CHD1O14646 1710 aa38.98■■■■□ 3.83
LINC01942-201ENST00000521373 FGD5Q6ZNL6 1462 aa38.97■■■■□ 3.83
LINC01942-201ENST00000521373 WDR97A6NE52 1622 aa38.96■■■■□ 3.83
LINC01942-201ENST00000521373 CUX1P39880 1505 aa38.96■■■■□ 3.83
LINC01942-201ENST00000521373 ARHGEF11O15085 1522 aa38.9■■■■□ 3.82
LINC01942-201ENST00000521373 TDRD9Q8NDG6 1382 aaKnown RBP38.86■■■■□ 3.81
LINC01942-201ENST00000521373 SUPT5HO00267 1087 aaKnown RBP38.85■■■■□ 3.81
LINC01942-201ENST00000521373 FBLN2P98095 1184 aa38.75■■■■□ 3.79
LINC01942-201ENST00000521373 SNAPC4Q5SXM2 1469 aa38.74■■■■□ 3.79
LINC01942-201ENST00000521373 MAGI1Q96QZ7 1491 aaPredicted RBP38.7■■■■□ 3.79
LINC01942-201ENST00000521373 GRIN2BQ13224 1484 aa38.68■■■■□ 3.78
LINC01942-201ENST00000521373 PBRM1Q86U86 1689 aa38.58■■■■□ 3.77
LINC01942-201ENST00000521373 ABCA10Q8WWZ4 1543 aa38.58■■■■□ 3.77
LINC01942-201ENST00000521373 GAPVD1Q14C86 1478 aa38.55■■■■□ 3.76
LINC01942-201ENST00000521373 CLASP1Q7Z460 1538 aa38.55■■■■□ 3.76
LINC01942-201ENST00000521373 CHMP7Q8WUX9 453 aaPredicted RBP38.55■■■■□ 3.76
LINC01942-201ENST00000521373 SYNJ2O15056 1496 aa38.54■■■■□ 3.76
LINC01942-201ENST00000521373 SYNJ1O43426 1573 aa38.54■■■■□ 3.76
LINC01942-201ENST00000521373 ARAP1Q96P48 1450 aa38.53■■■■□ 3.76
LINC01942-201ENST00000521373 ABCA5Q8WWZ7 1642 aa38.52■■■■□ 3.76
LINC01942-201ENST00000521373 CYB5RLQ6IPT4 315 aa38.51■■■■□ 3.76
LINC01942-201ENST00000521373 BIVM-ERCC5R4GMW8 1640 aa38.45■■■■□ 3.75
LINC01942-201ENST00000521373 TOP2BQ02880 1626 aa38.42■■■■□ 3.74
LINC01942-201ENST00000521373 WRNQ14191 1432 aaPredicted RBP eCLIP38.42■■■■□ 3.74
LINC01942-201ENST00000521373 ADAMTS12P58397 1594 aa38.2■■■■□ 3.71
LINC01942-201ENST00000521373 GRIN2AQ12879 1464 aa38.18■■■■□ 3.7
LINC01942-201ENST00000521373 ERICH3Q5RHP9 1530 aa38.12■■■■□ 3.69
LINC01942-201ENST00000521373 FHAD1B1AJZ9 1412 aa38.09■■■■□ 3.69
LINC01942-201ENST00000521373 NUP160Q12769 1436 aa38.06■■■■□ 3.68
LINC01942-201ENST00000521373 CEP170Q5SW79 1584 aa38.04■■■■□ 3.68
LINC01942-201ENST00000521373 TRHP20396 242 aaPredicted RBP38.03■■■■□ 3.68
LINC01942-201ENST00000521373 SHROOM2Q13796 1616 aa37.92■■■■□ 3.66
LINC01942-201ENST00000521373 ERCC6L2Q5T890 1561 aa37.89■■■■□ 3.66
LINC01942-201ENST00000521373 RUSC2Q8N2Y8 1516 aa37.67■■■■□ 3.62
LINC01942-201ENST00000521373 KIF27Q86VH2 1401 aa37.63■■■■□ 3.61
LINC01942-201ENST00000521373 PRG4Q92954 1404 aaPredicted RBP37.63■■■■□ 3.61
LINC01942-201ENST00000521373 JPH4Q96JJ6 628 aa37.61■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms