RNA–Protein interactions for RNA: ENST00000436027.9

YJEFN3-201, Transcript of YjeF N-terminal domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YJEFN3, Length 878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3-201ENST00000436027 NISCHQ9Y2I1 1504 aa54.62■■■■■ 6.33
YJEFN3-201ENST00000436027 CCDC180Q9P1Z9 1646 aa48.58■■■■■ 5.37
YJEFN3-201ENST00000436027 ABCC9O60706 1549 aa47.88■■■■■ 5.26
YJEFN3-201ENST00000436027 DCAF8L2P0C7V8 631 aa45.84■■■■■ 4.93
YJEFN3-201ENST00000436027 RB1CC1Q8TDY2 1594 aa45.84■■■■■ 4.93
YJEFN3-201ENST00000436027 NACADO15069 1562 aa45.71■■■■■ 4.91
YJEFN3-201ENST00000436027 ZCCHC6Q5VYS8 1495 aaKnown RBP45.46■■■■■ 4.87
YJEFN3-201ENST00000436027 MYO15BQ96JP2 1530 aa45.29■■■■■ 4.84
YJEFN3-201ENST00000436027 DCAF1Q9Y4B6 1507 aa45.06■■■■■ 4.8
YJEFN3-201ENST00000436027 UNC13AQ9UPW8 1703 aa44.95■■■■■ 4.79
YJEFN3-201ENST00000436027 PABPN1Q86U42 306 aaKnown RBP eCLIP44.76■■■■■ 4.762e-14■■■■■ 26.8
YJEFN3-201ENST00000436027 BICRAQ9NZM4 1560 aa44.56■■■■■ 4.72
YJEFN3-201ENST00000436027 SCRIBQ14160 1630 aa44.48■■■■■ 4.71
YJEFN3-201ENST00000436027 DNAJC5BQ9UF47 199 aa44.19■■■■■ 4.66
YJEFN3-201ENST00000436027 SHROOM4Q9ULL8 1493 aa43.83■■■■■ 4.61
YJEFN3-201ENST00000436027 EIF4G1Q04637 1599 aaKnown RBP43.36■■■■■ 4.53
YJEFN3-201ENST00000436027 CC2D2AQ9P2K1 1620 aa43.26■■■■■ 4.52
YJEFN3-201ENST00000436027 CECR2Q9BXF3 1484 aa42.98■■■■■ 4.47
YJEFN3-201ENST00000436027 SMARCA4P51532 1647 aa42.45■■■■■ 4.39
YJEFN3-201ENST00000436027 BAZ1AQ9NRL2 1556 aaPredicted RBP42.3■■■■■ 4.36
YJEFN3-201ENST00000436027 ATAD2BQ9ULI0 1458 aa42.25■■■■■ 4.35
YJEFN3-201ENST00000436027 NCAPD3P42695 1498 aa42.19■■■■■ 4.34
YJEFN3-201ENST00000436027 MROH2BQ7Z745 1585 aa42.18■■■■■ 4.34
YJEFN3-201ENST00000436027 SMARCA2P51531 1590 aa42.13■■■■■ 4.33
YJEFN3-201ENST00000436027 HMGXB3Q12766 1538 aa41.96■■■■■ 4.31
YJEFN3-201ENST00000436027 PEG3Q9GZU2 1588 aa41.95■■■■■ 4.31
YJEFN3-201ENST00000436027 BAZ1BQ9UIG0 1483 aaKnown RBP41.88■■■■■ 4.29
YJEFN3-201ENST00000436027 WIZO95785 1651 aa41.74■■■■■ 4.27
YJEFN3-201ENST00000436027 RSF1Q96T23 1441 aaPredicted RBP41.58■■■■■ 4.25
YJEFN3-201ENST00000436027 NESP48681 1621 aa41.41■■■■■ 4.22
YJEFN3-201ENST00000436027 ERCC6Q03468 1493 aa41.21■■■■■ 4.19
YJEFN3-201ENST00000436027 TOP2AP11388 1531 aaKnown RBP41.18■■■■■ 4.18
YJEFN3-201ENST00000436027 LAMC3Q9Y6N6 1575 aa41.11■■■■■ 4.17
YJEFN3-201ENST00000436027 CADPSQ9ULU8 1353 aa40.98■■■■■ 4.15
YJEFN3-201ENST00000436027 KIF21AQ7Z4S6 1674 aa40.9■■■■■ 4.14
YJEFN3-201ENST00000436027 PDS5BQ9NTI5 1447 aa40.83■■■■■ 4.13
YJEFN3-201ENST00000436027 CUX2O14529 1486 aa40.76■■■■■ 4.12
YJEFN3-201ENST00000436027 THOC2Q8NI27 1593 aaKnown RBP40.75■■■■■ 4.11
YJEFN3-201ENST00000436027 CCDC88BA6NC98 1476 aa40.74■■■■■ 4.11
YJEFN3-201ENST00000436027 CFTRP13569 1480 aa40.7■■■■■ 4.11
YJEFN3-201ENST00000436027 FANCD2Q9BXW9 1451 aa40.55■■■■■ 4.08
YJEFN3-201ENST00000436027 CEP164Q9UPV0 1460 aa40.5■■■■■ 4.07
YJEFN3-201ENST00000436027 SUPT5HO00267 1087 aaKnown RBP40.49■■■■■ 4.07
YJEFN3-201ENST00000436027 MRC2Q9UBG0 1479 aa40.48■■■■■ 4.07
YJEFN3-201ENST00000436027 PRDM2Q13029 1718 aa40.41■■■■■ 4.06
YJEFN3-201ENST00000436027 WDR62O43379 1518 aa40.34■■■■■ 4.05
YJEFN3-201ENST00000436027 URB2Q14146 1524 aaKnown RBP40.21■■■■■ 4.03
YJEFN3-201ENST00000436027 DNAJC5Q9H3Z4 198 aa40.06■■■■■ 4
YJEFN3-201ENST00000436027 TOPBP1Q92547 1522 aa39.9■■■■□ 3.98
YJEFN3-201ENST00000436027 DNMBPQ6XZF7 1577 aa39.8■■■■□ 3.96
YJEFN3-201ENST00000436027 ABCC8Q09428 1581 aa39.74■■■■□ 3.95
YJEFN3-201ENST00000436027 IFT140Q96RY7 1462 aa39.63■■■■□ 3.94
YJEFN3-201ENST00000436027 ZNF608Q9ULD9 1512 aaPredicted RBP39.6■■■■□ 3.93
YJEFN3-201ENST00000436027 CUX1P39880 1505 aa39.56■■■■□ 3.92
YJEFN3-201ENST00000436027 POLA1P09884 1462 aaPredicted RBP39.55■■■■□ 3.92
YJEFN3-201ENST00000436027 TARBP1Q13395 1621 aaKnown RBP39.47■■■■□ 3.91
YJEFN3-201ENST00000436027 RAD54L2Q9Y4B4 1467 aa39.45■■■■□ 3.91
YJEFN3-201ENST00000436027 FGD5Q6ZNL6 1462 aa39.44■■■■□ 3.9
YJEFN3-201ENST00000436027 EIF4G3O43432 1585 aaKnown RBP39.38■■■■□ 3.9
YJEFN3-201ENST00000436027 SOGA1O94964 1423 aa39.36■■■■□ 3.89
YJEFN3-201ENST00000436027 AQRO60306 1485 aaKnown RBP eCLIP39.33■■■■□ 3.894e-7■■■■□ 21.5
YJEFN3-201ENST00000436027 TDRD9Q8NDG6 1382 aaKnown RBP39.22■■■■□ 3.87
YJEFN3-201ENST00000436027 WRNQ14191 1432 aaPredicted RBP eCLIP39.18■■■■□ 3.86
YJEFN3-201ENST00000436027 SYNJ1O43426 1573 aa39.17■■■■□ 3.86
YJEFN3-201ENST00000436027 WDR97A6NE52 1622 aa39.12■■■■□ 3.85
YJEFN3-201ENST00000436027 BIVM-ERCC5R4GMW8 1640 aa39.12■■■■□ 3.85
YJEFN3-201ENST00000436027 TOP2BQ02880 1626 aa39.11■■■■□ 3.85
YJEFN3-201ENST00000436027 OSCARQ8IYS5 282 aa39.08■■■■□ 3.85
YJEFN3-201ENST00000436027 ABCA10Q8WWZ4 1543 aa38.99■■■■□ 3.83
YJEFN3-201ENST00000436027 CHD1O14646 1710 aa38.97■■■■□ 3.83
YJEFN3-201ENST00000436027 SNAPC4Q5SXM2 1469 aa38.94■■■■□ 3.82
YJEFN3-201ENST00000436027 FBLN2P98095 1184 aa38.9■■■■□ 3.82
YJEFN3-201ENST00000436027 GRIN2BQ13224 1484 aa38.9■■■■□ 3.82
YJEFN3-201ENST00000436027 GAPVD1Q14C86 1478 aa38.9■■■■□ 3.82
YJEFN3-201ENST00000436027 ABCA5Q8WWZ7 1642 aa38.89■■■■□ 3.82
YJEFN3-201ENST00000436027 PBRM1Q86U86 1689 aa38.88■■■■□ 3.81
YJEFN3-201ENST00000436027 MAGI1Q96QZ7 1491 aaPredicted RBP38.79■■■■□ 3.8
YJEFN3-201ENST00000436027 CHMP7Q8WUX9 453 aaPredicted RBP38.7■■■■□ 3.79
YJEFN3-201ENST00000436027 SYNJ2O15056 1496 aa38.66■■■■□ 3.78
YJEFN3-201ENST00000436027 RIMBP3CA6NJZ7 1639 aa38.57■■■■□ 3.77
YJEFN3-201ENST00000436027 RIMBP3BA6NNM3 1639 aa38.57■■■■□ 3.77
YJEFN3-201ENST00000436027 RIMBP3Q9UFD9 1639 aa38.57■■■■□ 3.77
YJEFN3-201ENST00000436027 TRIM41Q8WV44 630 aa38.54■■■■□ 3.76
YJEFN3-201ENST00000436027 ADAMTS12P58397 1594 aa38.53■■■■□ 3.76
YJEFN3-201ENST00000436027 ARHGEF11O15085 1522 aa38.5■■■■□ 3.75
YJEFN3-201ENST00000436027 ERICH3Q5RHP9 1530 aa38.48■■■■□ 3.75
YJEFN3-201ENST00000436027 CLASP1Q7Z460 1538 aa38.47■■■■□ 3.75
YJEFN3-201ENST00000436027 FHAD1B1AJZ9 1412 aa38.42■■■■□ 3.74
YJEFN3-201ENST00000436027 GRIN2AQ12879 1464 aa38.41■■■■□ 3.74
YJEFN3-201ENST00000436027 KIF27Q86VH2 1401 aa38.34■■■■□ 3.73
YJEFN3-201ENST00000436027 CEP170Q5SW79 1584 aa38.29■■■■□ 3.72
YJEFN3-201ENST00000436027 IGF1RP08069 1367 aa38.26■■■■□ 3.72
YJEFN3-201ENST00000436027 NUP160Q12769 1436 aa38.24■■■■□ 3.71
YJEFN3-201ENST00000436027 ARAP1Q96P48 1450 aa38.22■■■■□ 3.71
YJEFN3-201ENST00000436027 CYB5RLQ6IPT4 315 aa38.19■■■■□ 3.7
YJEFN3-201ENST00000436027 RUSC2Q8N2Y8 1516 aa38.12■■■■□ 3.69
YJEFN3-201ENST00000436027 CUL7Q14999 1698 aa38.11■■■■□ 3.69
YJEFN3-201ENST00000436027 ERCC6L2Q5T890 1561 aa38.05■■■■□ 3.68
YJEFN3-201ENST00000436027 CARMIL1Q5VZK9 1371 aa38.03■■■■□ 3.68
YJEFN3-201ENST00000436027 SHROOM2Q13796 1616 aa37.98■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms