RNA–Protein interactions for RNA: ENST00000264703.3

FNDC4-201, Transcript of fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC4, Length 1,657 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC4-201ENST00000264703 NISCHQ9Y2I1 1504 aa54.69■■■■■ 6.35
FNDC4-201ENST00000264703 CCDC180Q9P1Z9 1646 aa48.42■■■■■ 5.34
FNDC4-201ENST00000264703 ABCC9O60706 1549 aa47.2■■■■■ 5.15
FNDC4-201ENST00000264703 DCAF8L2P0C7V8 631 aa45.69■■■■■ 4.9
FNDC4-201ENST00000264703 ZCCHC6Q5VYS8 1495 aaKnown RBP45.62■■■■■ 4.89
FNDC4-201ENST00000264703 NACADO15069 1562 aa45.51■■■■■ 4.88
FNDC4-201ENST00000264703 RB1CC1Q8TDY2 1594 aa45.49■■■■■ 4.87
FNDC4-201ENST00000264703 MYO15BQ96JP2 1530 aa45.33■■■■■ 4.85
FNDC4-201ENST00000264703 DCAF1Q9Y4B6 1507 aa45.24■■■■■ 4.83
FNDC4-201ENST00000264703 UNC13AQ9UPW8 1703 aa44.37■■■■■ 4.69
FNDC4-201ENST00000264703 SCRIBQ14160 1630 aa44.27■■■■■ 4.68
FNDC4-201ENST00000264703 PABPN1Q86U42 306 aaKnown RBP eCLIP44.19■■■■■ 4.67
FNDC4-201ENST00000264703 BICRAQ9NZM4 1560 aa44.08■■■■■ 4.65
FNDC4-201ENST00000264703 SHROOM4Q9ULL8 1493 aa43.65■■■■■ 4.58
FNDC4-201ENST00000264703 DNAJC5BQ9UF47 199 aa43.07■■■■■ 4.49
FNDC4-201ENST00000264703 EIF4G1Q04637 1599 aaKnown RBP42.92■■■■■ 4.46
FNDC4-201ENST00000264703 CC2D2AQ9P2K1 1620 aa42.67■■■■■ 4.42
FNDC4-201ENST00000264703 CECR2Q9BXF3 1484 aa42.6■■■■■ 4.41
FNDC4-201ENST00000264703 BAZ1AQ9NRL2 1556 aaPredicted RBP42.37■■■■■ 4.37
FNDC4-201ENST00000264703 SMARCA4P51532 1647 aa42.35■■■■■ 4.37
FNDC4-201ENST00000264703 MROH2BQ7Z745 1585 aa42.16■■■■■ 4.34
FNDC4-201ENST00000264703 ATAD2BQ9ULI0 1458 aa42.08■■■■■ 4.33
FNDC4-201ENST00000264703 SMARCA2P51531 1590 aa42.03■■■■■ 4.32
FNDC4-201ENST00000264703 NCAPD3P42695 1498 aa42.01■■■■■ 4.32
FNDC4-201ENST00000264703 PEG3Q9GZU2 1588 aa41.93■■■■■ 4.3
FNDC4-201ENST00000264703 HMGXB3Q12766 1538 aa41.81■■■■■ 4.28
FNDC4-201ENST00000264703 RSF1Q96T23 1441 aaPredicted RBP41.8■■■■■ 4.28
FNDC4-201ENST00000264703 BAZ1BQ9UIG0 1483 aaKnown RBP41.76■■■■■ 4.28
FNDC4-201ENST00000264703 WIZO95785 1651 aa41.69■■■■■ 4.27
FNDC4-201ENST00000264703 TOP2AP11388 1531 aaKnown RBP41.28■■■■■ 4.2
FNDC4-201ENST00000264703 SUPT5HO00267 1087 aaKnown RBP41.04■■■■■ 4.16
FNDC4-201ENST00000264703 NESP48681 1621 aa40.92■■■■■ 4.14
FNDC4-201ENST00000264703 LAMC3Q9Y6N6 1575 aa40.84■■■■■ 4.13
FNDC4-201ENST00000264703 CADPSQ9ULU8 1353 aa40.83■■■■■ 4.13
FNDC4-201ENST00000264703 CCDC88BA6NC98 1476 aa40.82■■■■■ 4.13
FNDC4-201ENST00000264703 ERCC6Q03468 1493 aa40.67■■■■■ 4.1
FNDC4-201ENST00000264703 CFTRP13569 1480 aa40.63■■■■■ 4.09
FNDC4-201ENST00000264703 PDS5BQ9NTI5 1447 aa40.59■■■■■ 4.09
FNDC4-201ENST00000264703 KIF21AQ7Z4S6 1674 aa40.38■■■■■ 4.05
FNDC4-201ENST00000264703 FANCD2Q9BXW9 1451 aa40.35■■■■■ 4.05
FNDC4-201ENST00000264703 CEP164Q9UPV0 1460 aa40.27■■■■■ 4.04
FNDC4-201ENST00000264703 PRDM2Q13029 1718 aa40.22■■■■■ 4.03
FNDC4-201ENST00000264703 THOC2Q8NI27 1593 aaKnown RBP40.19■■■■■ 4.02
FNDC4-201ENST00000264703 MRC2Q9UBG0 1479 aa40.13■■■■■ 4.01
FNDC4-201ENST00000264703 CUX2O14529 1486 aa40.09■■■■■ 4.01
FNDC4-201ENST00000264703 WDR62O43379 1518 aa39.98■■■■□ 3.99
FNDC4-201ENST00000264703 URB2Q14146 1524 aaKnown RBP39.91■■■■□ 3.98
FNDC4-201ENST00000264703 ABCC8Q09428 1581 aa39.73■■■■□ 3.95
FNDC4-201ENST00000264703 TOPBP1Q92547 1522 aa39.72■■■■□ 3.95
FNDC4-201ENST00000264703 DNMBPQ6XZF7 1577 aa39.68■■■■□ 3.94
FNDC4-201ENST00000264703 CUX1P39880 1505 aa39.53■■■■□ 3.92
FNDC4-201ENST00000264703 WRNQ14191 1432 aaPredicted RBP eCLIP39.42■■■■□ 3.9
FNDC4-201ENST00000264703 POLA1P09884 1462 aaPredicted RBP39.42■■■■□ 3.9
FNDC4-201ENST00000264703 IFT140Q96RY7 1462 aa39.41■■■■□ 3.9
FNDC4-201ENST00000264703 FGD5Q6ZNL6 1462 aa39.37■■■■□ 3.89
FNDC4-201ENST00000264703 SOGA1O94964 1423 aa39.28■■■■□ 3.88
FNDC4-201ENST00000264703 SYNJ1O43426 1573 aa39.26■■■■□ 3.88
FNDC4-201ENST00000264703 TOP2BQ02880 1626 aa39.26■■■■□ 3.87
FNDC4-201ENST00000264703 RAD54L2Q9Y4B4 1467 aa39.26■■■■□ 3.87
FNDC4-201ENST00000264703 TARBP1Q13395 1621 aaKnown RBP39.24■■■■□ 3.87
FNDC4-201ENST00000264703 BIVM-ERCC5R4GMW8 1640 aa39.22■■■■□ 3.87
FNDC4-201ENST00000264703 ZNF608Q9ULD9 1512 aaPredicted RBP39.22■■■■□ 3.87
FNDC4-201ENST00000264703 AQRO60306 1485 aaKnown RBP eCLIP39.04■■■■□ 3.841e-8■■■■■ 37.7
FNDC4-201ENST00000264703 TDRD9Q8NDG6 1382 aaKnown RBP39.04■■■■□ 3.84
FNDC4-201ENST00000264703 EIF4G3O43432 1585 aaKnown RBP39.04■■■■□ 3.84
FNDC4-201ENST00000264703 ABCA10Q8WWZ4 1543 aa38.99■■■■□ 3.83
FNDC4-201ENST00000264703 WDR97A6NE52 1622 aa38.95■■■■□ 3.83
FNDC4-201ENST00000264703 GAPVD1Q14C86 1478 aa38.82■■■■□ 3.81
FNDC4-201ENST00000264703 ABCA5Q8WWZ7 1642 aa38.78■■■■□ 3.8
FNDC4-201ENST00000264703 GRIN2BQ13224 1484 aa38.77■■■■□ 3.8
FNDC4-201ENST00000264703 TRIM41Q8WV44 630 aa38.74■■■■□ 3.79
FNDC4-201ENST00000264703 SNAPC4Q5SXM2 1469 aa38.68■■■■□ 3.78
FNDC4-201ENST00000264703 PBRM1Q86U86 1689 aa38.64■■■■□ 3.78
FNDC4-201ENST00000264703 MAGI1Q96QZ7 1491 aaPredicted RBP38.62■■■■□ 3.77
FNDC4-201ENST00000264703 FBLN2P98095 1184 aa38.58■■■■□ 3.77
FNDC4-201ENST00000264703 KIF27Q86VH2 1401 aa38.58■■■■□ 3.77
FNDC4-201ENST00000264703 DNAJC5Q9H3Z4 198 aa38.55■■■■□ 3.76
FNDC4-201ENST00000264703 OSCARQ8IYS5 282 aa38.55■■■■□ 3.76
FNDC4-201ENST00000264703 ERICH3Q5RHP9 1530 aa38.52■■■■□ 3.76
FNDC4-201ENST00000264703 CHMP7Q8WUX9 453 aaPredicted RBP38.49■■■■□ 3.75
FNDC4-201ENST00000264703 SYNJ2O15056 1496 aa38.48■■■■□ 3.75
FNDC4-201ENST00000264703 CHD1O14646 1710 aa38.44■■■■□ 3.74
FNDC4-201ENST00000264703 CHIC1Q5VXU3 224 aa38.44■■■■□ 3.74
FNDC4-201ENST00000264703 ADAMTS12P58397 1594 aa38.39■■■■□ 3.74
FNDC4-201ENST00000264703 FHAD1B1AJZ9 1412 aa38.39■■■■□ 3.74
FNDC4-201ENST00000264703 IGF1RP08069 1367 aa38.38■■■■□ 3.74
FNDC4-201ENST00000264703 RUSC2Q8N2Y8 1516 aa38.31■■■■□ 3.72
FNDC4-201ENST00000264703 GRIN2AQ12879 1464 aa38.27■■■■□ 3.72
FNDC4-201ENST00000264703 CUL7Q14999 1698 aa38.2■■■■□ 3.71
FNDC4-201ENST00000264703 CARMIL1Q5VZK9 1371 aa38.16■■■■□ 3.7
FNDC4-201ENST00000264703 NUP160Q12769 1436 aa38.08■■■■□ 3.69
FNDC4-201ENST00000264703 CLASP1Q7Z460 1538 aa38.07■■■■□ 3.68
FNDC4-201ENST00000264703 CEP170Q5SW79 1584 aa38.04■■■■□ 3.68
FNDC4-201ENST00000264703 EEA1Q15075 1411 aa38.02■■■■□ 3.68
FNDC4-201ENST00000264703 CSRNP3Q8WYN3 585 aa37.97■■■■□ 3.67
FNDC4-201ENST00000264703 RAPGEF2Q9Y4G8 1499 aa37.96■■■■□ 3.67
FNDC4-201ENST00000264703 FAM9AQ8IZU1 332 aaPredicted RBP37.94■■■■□ 3.66
FNDC4-201ENST00000264703 PRXQ9BXM0 1461 aa37.89■■■■□ 3.66
FNDC4-201ENST00000264703 ARHGEF11O15085 1522 aa37.88■■■■□ 3.65
FNDC4-201ENST00000264703 RIMBP3CA6NJZ7 1639 aa37.82■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms