Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.28□□□□□ -0.28
TSPAN4O14817 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 AC005104.2-201ENST00000427818 678 ntBASIC13.28□□□□□ -0.28
TSPAN4O14817 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 KRT18P31-201ENST00000506277 1292 ntBASIC13.28□□□□□ -0.28
TSPAN4O14817 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.28□□□□□ -0.28
TSPAN4O14817 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TSPAN4O14817 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
TSPAN4O14817 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TSPAN4O14817 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TSPAN4O14817 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TSPAN4O14817 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TSPAN4O14817 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.27□□□□□ -0.28
TSPAN4O14817 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.27□□□□□ -0.28
TSPAN4O14817 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.27□□□□□ -0.28
TSPAN4O14817 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.27□□□□□ -0.28
TSPAN4O14817 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.27□□□□□ -0.28
TSPAN4O14817 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.27□□□□□ -0.28
TSPAN4O14817 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TSPAN4O14817 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.27□□□□□ -0.28
TSPAN4O14817 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TSPAN4O14817 DNM1P41-201ENST00000623634 3350 ntBASIC13.27□□□□□ -0.28
TSPAN4O14817 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TSPAN4O14817 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TSPAN4O14817 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.27□□□□□ -0.29
TSPAN4O14817 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.27□□□□□ -0.29
TSPAN4O14817 AC002558.1-201ENST00000488906 803 ntBASIC13.27□□□□□ -0.29
TSPAN4O14817 AC111152.3-201ENST00000569699 673 ntBASIC13.27□□□□□ -0.29
TSPAN4O14817 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.27□□□□□ -0.29
TSPAN4O14817 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.27□□□□□ -0.29
TSPAN4O14817 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.27□□□□□ -0.29
TSPAN4O14817 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.27□□□□□ -0.29
TSPAN4O14817 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.27□□□□□ -0.29
TSPAN4O14817 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TSPAN4O14817 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.27□□□□□ -0.29
TSPAN4O14817 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.27□□□□□ -0.29
TSPAN4O14817 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.27□□□□□ -0.29
TSPAN4O14817 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TSPAN4O14817 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.27□□□□□ -0.29
TSPAN4O14817 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TSPAN4O14817 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.27□□□□□ -0.29
TSPAN4O14817 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.27□□□□□ -0.29
TSPAN4O14817 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.27□□□□□ -0.29
TSPAN4O14817 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TSPAN4O14817 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.27□□□□□ -0.29
TSPAN4O14817 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TSPAN4O14817 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.27□□□□□ -0.29
TSPAN4O14817 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 AC020658.6-201ENST00000623564 1870 ntBASIC13.27□□□□□ -0.29
TSPAN4O14817 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.27□□□□□ -0.29
TSPAN4O14817 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TSPAN4O14817 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TSPAN4O14817 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms