RNA–Protein interactions for RNA: ENST00000591695.5

TMED1-207, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5 BASIC

Gene TMED1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-207ENST00000591695 NISCHQ9Y2I1 1504 aa41.18■■■■■ 4.18
TMED1-207ENST00000591695 CCDC180Q9P1Z9 1646 aa36.12■■■■□ 3.37
TMED1-207ENST00000591695 ABCC9O60706 1549 aa34.81■■■■□ 3.16
TMED1-207ENST00000591695 ZCCHC6Q5VYS8 1495 aaKnown RBP34.48■■■■□ 3.11
TMED1-207ENST00000591695 DCAF8L2P0C7V8 631 aa34.28■■■■□ 3.08
TMED1-207ENST00000591695 DCAF1Q9Y4B6 1507 aa34.01■■■■□ 3.04
TMED1-207ENST00000591695 MYO15BQ96JP2 1530 aa33.82■■■■□ 3
TMED1-207ENST00000591695 NACADO15069 1562 aa33.81■■■■□ 3
TMED1-207ENST00000591695 DNAJC5BQ9UF47 199 aa33.74■■■□□ 2.99
TMED1-207ENST00000591695 RB1CC1Q8TDY2 1594 aa33.67■■■□□ 2.98
TMED1-207ENST00000591695 SHROOM4Q9ULL8 1493 aa33.28■■■□□ 2.92
TMED1-207ENST00000591695 SCRIBQ14160 1630 aa33.21■■■□□ 2.91
TMED1-207ENST00000591695 UNC13AQ9UPW8 1703 aa32.86■■■□□ 2.85
TMED1-207ENST00000591695 PABPN1Q86U42 306 aaKnown RBP eCLIP32.69■■■□□ 2.82
TMED1-207ENST00000591695 BICRAQ9NZM4 1560 aa32.63■■■□□ 2.81
TMED1-207ENST00000591695 CECR2Q9BXF3 1484 aa32.06■■■□□ 2.72
TMED1-207ENST00000591695 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
TMED1-207ENST00000591695 MROH2BQ7Z745 1585 aa31.8■■■□□ 2.68
TMED1-207ENST00000591695 DNAJC5Q9H3Z4 198 aa31.79■■■□□ 2.68
TMED1-207ENST00000591695 SMARCA4P51532 1647 aa31.77■■■□□ 2.68
TMED1-207ENST00000591695 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
TMED1-207ENST00000591695 SUPT5HO00267 1087 aaKnown RBP31.73■■■□□ 2.67
TMED1-207ENST00000591695 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
TMED1-207ENST00000591695 WIZO95785 1651 aa31.48■■■□□ 2.63
TMED1-207ENST00000591695 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
TMED1-207ENST00000591695 CC2D2AQ9P2K1 1620 aa31.39■■■□□ 2.62
TMED1-207ENST00000591695 SMARCA2P51531 1590 aa31.36■■■□□ 2.61
TMED1-207ENST00000591695 PEG3Q9GZU2 1588 aa31.36■■■□□ 2.61
TMED1-207ENST00000591695 NCAPD3P42695 1498 aa31.21■■■□□ 2.59
TMED1-207ENST00000591695 BAZ1BQ9UIG0 1483 aaKnown RBP31.21■■■□□ 2.59
TMED1-207ENST00000591695 TOP2AP11388 1531 aaKnown RBP31.18■■■□□ 2.58
TMED1-207ENST00000591695 HMGXB3Q12766 1538 aa31.12■■■□□ 2.57
TMED1-207ENST00000591695 CCDC88BA6NC98 1476 aa30.85■■■□□ 2.53
TMED1-207ENST00000591695 CUX2O14529 1486 aa30.42■■■□□ 2.46
TMED1-207ENST00000591695 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
TMED1-207ENST00000591695 CFTRP13569 1480 aa30.37■■■□□ 2.45
TMED1-207ENST00000591695 NESP48681 1621 aa30.32■■■□□ 2.44
TMED1-207ENST00000591695 LAMC3Q9Y6N6 1575 aa30.24■■■□□ 2.43
TMED1-207ENST00000591695 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
TMED1-207ENST00000591695 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
TMED1-207ENST00000591695 FANCD2Q9BXW9 1451 aa30.06■■■□□ 2.4
TMED1-207ENST00000591695 PDS5BQ9NTI5 1447 aa30.06■■■□□ 2.4
TMED1-207ENST00000591695 CHIC1Q5VXU3 224 aa30.04■■■□□ 2.4
TMED1-207ENST00000591695 ABCC8Q09428 1581 aa30.02■■■□□ 2.4
TMED1-207ENST00000591695 TRIM41Q8WV44 630 aa29.95■■■□□ 2.39
TMED1-207ENST00000591695 CEP164Q9UPV0 1460 aa29.94■■■□□ 2.38
TMED1-207ENST00000591695 WRNQ14191 1432 aaPredicted RBP eCLIP29.91■■■□□ 2.38
TMED1-207ENST00000591695 KIF21AQ7Z4S6 1674 aa29.89■■■□□ 2.38
TMED1-207ENST00000591695 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
TMED1-207ENST00000591695 CUX1P39880 1505 aa29.77■■■□□ 2.36
TMED1-207ENST00000591695 MRC2Q9UBG0 1479 aa29.72■■■□□ 2.35
TMED1-207ENST00000591695 URB2Q14146 1524 aaKnown RBP29.71■■■□□ 2.35
TMED1-207ENST00000591695 TOP2BQ02880 1626 aa29.68■■■□□ 2.34
TMED1-207ENST00000591695 DNMBPQ6XZF7 1577 aa29.68■■■□□ 2.34
TMED1-207ENST00000591695 TOPBP1Q92547 1522 aa29.67■■■□□ 2.34
TMED1-207ENST00000591695 BIVM-ERCC5R4GMW8 1640 aa29.65■■■□□ 2.34
TMED1-207ENST00000591695 THOC2Q8NI27 1593 aaKnown RBP29.58■■■□□ 2.33
TMED1-207ENST00000591695 WDR62O43379 1518 aa29.55■■■□□ 2.32
TMED1-207ENST00000591695 FGD5Q6ZNL6 1462 aa29.55■■■□□ 2.32
TMED1-207ENST00000591695 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
TMED1-207ENST00000591695 RAD54L2Q9Y4B4 1467 aa29.41■■■□□ 2.3
TMED1-207ENST00000591695 SOGA1O94964 1423 aa29.39■■■□□ 2.3
TMED1-207ENST00000591695 FAM9AQ8IZU1 332 aaPredicted RBP29.34■■■□□ 2.29
TMED1-207ENST00000591695 RUSC2Q8N2Y8 1516 aa29.27■■■□□ 2.28
TMED1-207ENST00000591695 IFT140Q96RY7 1462 aa29.26■■■□□ 2.27
TMED1-207ENST00000591695 ABCA10Q8WWZ4 1543 aa29.25■■■□□ 2.27
TMED1-207ENST00000591695 TARBP1Q13395 1621 aaKnown RBP29.23■■■□□ 2.27
TMED1-207ENST00000591695 KIF27Q86VH2 1401 aa29.21■■■□□ 2.27
TMED1-207ENST00000591695 TDRD9Q8NDG6 1382 aaKnown RBP29.17■■■□□ 2.26
TMED1-207ENST00000591695 EEA1Q15075 1411 aa29.17■■■□□ 2.26
TMED1-207ENST00000591695 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
TMED1-207ENST00000591695 ZNF608Q9ULD9 1512 aaPredicted RBP29.11■■■□□ 2.25
TMED1-207ENST00000591695 CSRNP3Q8WYN3 585 aa29.09■■■□□ 2.25
TMED1-207ENST00000591695 AQRO60306 1485 aaKnown RBP eCLIP29.07■■■□□ 2.24
TMED1-207ENST00000591695 GAPVD1Q14C86 1478 aa29.06■■■□□ 2.24
TMED1-207ENST00000591695 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
TMED1-207ENST00000591695 IGF1RP08069 1367 aa28.99■■■□□ 2.23
TMED1-207ENST00000591695 EIF4G3O43432 1585 aaKnown RBP28.98■■■□□ 2.23
TMED1-207ENST00000591695 EHMT2Q96KQ7 1210 aa28.97■■■□□ 2.23
TMED1-207ENST00000591695 GRIN2BQ13224 1484 aa28.92■■■□□ 2.22
TMED1-207ENST00000591695 ERICH3Q5RHP9 1530 aa28.89■■■□□ 2.22
TMED1-207ENST00000591695 LOC105371045A0A1W2PR82 267 aa28.88■■■□□ 2.21
TMED1-207ENST00000591695 OSCARQ8IYS5 282 aa28.88■■■□□ 2.21
TMED1-207ENST00000591695 PBRM1Q86U86 1689 aa28.88■■■□□ 2.21
TMED1-207ENST00000591695 CARMIL1Q5VZK9 1371 aa28.86■■■□□ 2.21
TMED1-207ENST00000591695 PRXQ9BXM0 1461 aa28.85■■■□□ 2.21
TMED1-207ENST00000591695 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
TMED1-207ENST00000591695 KIF21BO75037 1637 aa28.8■■■□□ 2.2
TMED1-207ENST00000591695 CUL7Q14999 1698 aa28.78■■■□□ 2.2
TMED1-207ENST00000591695 RAPGEF2Q9Y4G8 1499 aa28.78■■■□□ 2.2
TMED1-207ENST00000591695 GOLGA3Q08378 1498 aa28.77■■■□□ 2.2
TMED1-207ENST00000591695 FHAD1B1AJZ9 1412 aa28.74■■■□□ 2.19
TMED1-207ENST00000591695 ADAMTS12P58397 1594 aa28.74■■■□□ 2.19
TMED1-207ENST00000591695 MAGI1Q96QZ7 1491 aaPredicted RBP28.72■■■□□ 2.19
TMED1-207ENST00000591695 UBTFP17480 764 aaKnown RBP28.7■■■□□ 2.18
TMED1-207ENST00000591695 FBLN2P98095 1184 aa28.64■■■□□ 2.18
TMED1-207ENST00000591695 RIMBP3CA6NJZ7 1639 aa28.63■■■□□ 2.17
TMED1-207ENST00000591695 RIMBP3BA6NNM3 1639 aa28.63■■■□□ 2.17
TMED1-207ENST00000591695 RIMBP3Q9UFD9 1639 aa28.63■■■□□ 2.17
TMED1-207ENST00000591695 CHMP7Q8WUX9 453 aaPredicted RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms