RNA–Protein interactions for RNA: ENST00000378482.6

TSPAN7-202, Transcript of tetraspanin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN7, Length 1,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN7-202ENST00000378482 NISCHQ9Y2I1 1504 aa39.41■■■■□ 3.9
TSPAN7-202ENST00000378482 CCDC180Q9P1Z9 1646 aa34.31■■■■□ 3.08
TSPAN7-202ENST00000378482 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
TSPAN7-202ENST00000378482 DCAF8L2P0C7V8 631 aa32.69■■■□□ 2.82
TSPAN7-202ENST00000378482 ABCC9O60706 1549 aa32.61■■■□□ 2.81
TSPAN7-202ENST00000378482 DCAF1Q9Y4B6 1507 aa32.54■■■□□ 2.8
TSPAN7-202ENST00000378482 SHROOM4Q9ULL8 1493 aa32.19■■■□□ 2.74
TSPAN7-202ENST00000378482 MYO15BQ96JP2 1530 aa32.17■■■□□ 2.74
TSPAN7-202ENST00000378482 NACADO15069 1562 aa32.01■■■□□ 2.71
TSPAN7-202ENST00000378482 RB1CC1Q8TDY2 1594 aa31.75■■■□□ 2.67
TSPAN7-202ENST00000378482 SCRIBQ14160 1630 aa31.61■■■□□ 2.65
TSPAN7-202ENST00000378482 UNC13AQ9UPW8 1703 aa31.08■■■□□ 2.57
TSPAN7-202ENST00000378482 SUPT5HO00267 1087 aaKnown RBP30.97■■■□□ 2.55
TSPAN7-202ENST00000378482 BICRAQ9NZM4 1560 aa30.81■■■□□ 2.52
TSPAN7-202ENST00000378482 PABPN1Q86U42 306 aaKnown RBP eCLIP30.8■■■□□ 2.52
TSPAN7-202ENST00000378482 CECR2Q9BXF3 1484 aa30.66■■■□□ 2.5
TSPAN7-202ENST00000378482 RSF1Q96T23 1441 aaPredicted RBP30.58■■■□□ 2.49
TSPAN7-202ENST00000378482 MROH2BQ7Z745 1585 aa30.46■■■□□ 2.47
TSPAN7-202ENST00000378482 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
TSPAN7-202ENST00000378482 SMARCA4P51532 1647 aa30.28■■■□□ 2.44
TSPAN7-202ENST00000378482 WIZO95785 1651 aa30.19■■■□□ 2.42
TSPAN7-202ENST00000378482 PEG3Q9GZU2 1588 aa29.89■■■□□ 2.38
TSPAN7-202ENST00000378482 EIF4G1Q04637 1599 aaKnown RBP29.89■■■□□ 2.37
TSPAN7-202ENST00000378482 TOP2AP11388 1531 aaKnown RBP29.85■■■□□ 2.37
TSPAN7-202ENST00000378482 ATAD2BQ9ULI0 1458 aa29.83■■■□□ 2.37
TSPAN7-202ENST00000378482 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
TSPAN7-202ENST00000378482 BAZ1BQ9UIG0 1483 aaKnown RBP29.65■■■□□ 2.34
TSPAN7-202ENST00000378482 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
TSPAN7-202ENST00000378482 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
TSPAN7-202ENST00000378482 NCAPD3P42695 1498 aa29.58■■■□□ 2.33
TSPAN7-202ENST00000378482 HMGXB3Q12766 1538 aa29.49■■■□□ 2.31
TSPAN7-202ENST00000378482 CC2D2AQ9P2K1 1620 aa29.47■■■□□ 2.31
TSPAN7-202ENST00000378482 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
TSPAN7-202ENST00000378482 ABCC8Q09428 1581 aa28.95■■■□□ 2.22
TSPAN7-202ENST00000378482 CFTRP13569 1480 aa28.91■■■□□ 2.22
TSPAN7-202ENST00000378482 DNAJC5BQ9UF47 199 aa28.86■■■□□ 2.21
TSPAN7-202ENST00000378482 CADPSQ9ULU8 1353 aa28.84■■■□□ 2.21
TSPAN7-202ENST00000378482 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
TSPAN7-202ENST00000378482 PRDM2Q13029 1718 aa28.66■■■□□ 2.18
TSPAN7-202ENST00000378482 SYNJ1O43426 1573 aa28.64■■■□□ 2.17
TSPAN7-202ENST00000378482 NESP48681 1621 aa28.61■■■□□ 2.17
TSPAN7-202ENST00000378482 FAM9AQ8IZU1 332 aaPredicted RBP28.61■■■□□ 2.17
TSPAN7-202ENST00000378482 LAMC3Q9Y6N6 1575 aa28.55■■■□□ 2.16
TSPAN7-202ENST00000378482 TOP2BQ02880 1626 aa28.51■■■□□ 2.15
TSPAN7-202ENST00000378482 LOC105371045A0A1W2PR82 267 aa28.51■■■□□ 2.15
TSPAN7-202ENST00000378482 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.15
TSPAN7-202ENST00000378482 CUX1P39880 1505 aa28.47■■■□□ 2.15
TSPAN7-202ENST00000378482 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
TSPAN7-202ENST00000378482 SOGA1O94964 1423 aa28.43■■■□□ 2.14
TSPAN7-202ENST00000378482 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
TSPAN7-202ENST00000378482 RUSC2Q8N2Y8 1516 aa28.33■■■□□ 2.13
TSPAN7-202ENST00000378482 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
TSPAN7-202ENST00000378482 EEA1Q15075 1411 aa28.3■■■□□ 2.12
TSPAN7-202ENST00000378482 CSRNP3Q8WYN3 585 aa28.24■■■□□ 2.11
TSPAN7-202ENST00000378482 EHMT2Q96KQ7 1210 aa28.22■■■□□ 2.11
TSPAN7-202ENST00000378482 DNMBPQ6XZF7 1577 aa28.21■■■□□ 2.11
TSPAN7-202ENST00000378482 KIF21AQ7Z4S6 1674 aa28.2■■■□□ 2.1
TSPAN7-202ENST00000378482 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
TSPAN7-202ENST00000378482 FGD5Q6ZNL6 1462 aa28.17■■■□□ 2.1
TSPAN7-202ENST00000378482 URB2Q14146 1524 aaKnown RBP28.15■■■□□ 2.1
TSPAN7-202ENST00000378482 KIF27Q86VH2 1401 aa28.05■■■□□ 2.08
TSPAN7-202ENST00000378482 POLA1P09884 1462 aaPredicted RBP28.05■■■□□ 2.08
TSPAN7-202ENST00000378482 CUX2O14529 1486 aa28■■■□□ 2.07
TSPAN7-202ENST00000378482 MRC2Q9UBG0 1479 aa27.99■■■□□ 2.07
TSPAN7-202ENST00000378482 RAD54L2Q9Y4B4 1467 aa27.99■■■□□ 2.07
TSPAN7-202ENST00000378482 ERCC6Q03468 1493 aa27.95■■■□□ 2.06
TSPAN7-202ENST00000378482 GOLGA3Q08378 1498 aa27.93■■■□□ 2.06
TSPAN7-202ENST00000378482 KIF21BO75037 1637 aa27.92■■■□□ 2.06
TSPAN7-202ENST00000378482 ABCA10Q8WWZ4 1543 aa27.91■■■□□ 2.06
TSPAN7-202ENST00000378482 UBTFP17480 764 aaKnown RBP27.88■■■□□ 2.05
TSPAN7-202ENST00000378482 TNIKQ9UKE5 1360 aa27.85■■■□□ 2.05
TSPAN7-202ENST00000378482 IGF1RP08069 1367 aa27.85■■■□□ 2.05
TSPAN7-202ENST00000378482 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
TSPAN7-202ENST00000378482 RAPGEF2Q9Y4G8 1499 aa27.84■■■□□ 2.05
TSPAN7-202ENST00000378482 WDR62O43379 1518 aa27.83■■■□□ 2.05
TSPAN7-202ENST00000378482 WDR97A6NE52 1622 aa27.77■■■□□ 2.04
TSPAN7-202ENST00000378482 ERICH3Q5RHP9 1530 aa27.75■■■□□ 2.03
TSPAN7-202ENST00000378482 TARBP1Q13395 1621 aaKnown RBP27.75■■■□□ 2.03
TSPAN7-202ENST00000378482 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
TSPAN7-202ENST00000378482 THOC2Q8NI27 1593 aaKnown RBP27.74■■■□□ 2.03
TSPAN7-202ENST00000378482 CEP162Q5TB80 1403 aa27.69■■■□□ 2.02
TSPAN7-202ENST00000378482 CARMIL1Q5VZK9 1371 aa27.69■■■□□ 2.02
TSPAN7-202ENST00000378482 ABCA5Q8WWZ7 1642 aa27.66■■■□□ 2.02
TSPAN7-202ENST00000378482 GAPVD1Q14C86 1478 aa27.65■■■□□ 2.02
TSPAN7-202ENST00000378482 IFT140Q96RY7 1462 aa27.65■■■□□ 2.02
TSPAN7-202ENST00000378482 AQRO60306 1485 aaKnown RBP eCLIP27.56■■■□□ 2
TSPAN7-202ENST00000378482 CUL7Q14999 1698 aa27.54■■■□□ 2
TSPAN7-202ENST00000378482 ZNF608Q9ULD9 1512 aaPredicted RBP27.53■■■□□ 2
TSPAN7-202ENST00000378482 CLIP1P30622 1438 aa27.5■■□□□ 1.99
TSPAN7-202ENST00000378482 RANGAP1P46060 587 aaPredicted RBP27.48■■□□□ 1.99
TSPAN7-202ENST00000378482 GRIN2BQ13224 1484 aa27.44■■□□□ 1.98
TSPAN7-202ENST00000378482 PBRM1Q86U86 1689 aa27.44■■□□□ 1.98
TSPAN7-202ENST00000378482 EIF4G3O43432 1585 aaKnown RBP27.38■■□□□ 1.97
TSPAN7-202ENST00000378482 FHAD1B1AJZ9 1412 aa27.36■■□□□ 1.97
TSPAN7-202ENST00000378482 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
TSPAN7-202ENST00000378482 SNAPC4Q5SXM2 1469 aa27.27■■□□□ 1.96
TSPAN7-202ENST00000378482 ARHGAP35Q9NRY4 1499 aa27.24■■□□□ 1.95
TSPAN7-202ENST00000378482 VPS8Q8N3P4 1428 aa27.24■■□□□ 1.95
TSPAN7-202ENST00000378482 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
TSPAN7-202ENST00000378482 CTTNBP2Q8WZ74 1663 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms