RNA–Protein interactions for RNA: ENST00000592923.5

CNN1-210, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-210ENST00000592923 NISCHQ9Y2I1 1504 aa34.5■■■■□ 3.11
CNN1-210ENST00000592923 CCDC180Q9P1Z9 1646 aa29.9■■■□□ 2.38
CNN1-210ENST00000592923 ZCCHC6Q5VYS8 1495 aaKnown RBP29.13■■■□□ 2.25
CNN1-210ENST00000592923 DCAF1Q9Y4B6 1507 aa28.56■■■□□ 2.16
CNN1-210ENST00000592923 SHROOM4Q9ULL8 1493 aa28.44■■■□□ 2.14
CNN1-210ENST00000592923 DCAF8L2P0C7V8 631 aa28.15■■■□□ 2.1
CNN1-210ENST00000592923 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
CNN1-210ENST00000592923 ABCC9O60706 1549 aa27.73■■■□□ 2.03
CNN1-210ENST00000592923 NACADO15069 1562 aa27.68■■■□□ 2.02
CNN1-210ENST00000592923 SUPT5HO00267 1087 aaKnown RBP27.57■■■□□ 2
CNN1-210ENST00000592923 SCRIBQ14160 1630 aa27.54■■■□□ 2
CNN1-210ENST00000592923 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
CNN1-210ENST00000592923 RSF1Q96T23 1441 aaPredicted RBP26.94■■□□□ 1.9
CNN1-210ENST00000592923 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
CNN1-210ENST00000592923 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
CNN1-210ENST00000592923 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
CNN1-210ENST00000592923 MROH2BQ7Z745 1585 aa26.67■■□□□ 1.86
CNN1-210ENST00000592923 BAZ1AQ9NRL2 1556 aaPredicted RBP26.61■■□□□ 1.85
CNN1-210ENST00000592923 BICRAQ9NZM4 1560 aa26.51■■□□□ 1.83
CNN1-210ENST00000592923 WIZO95785 1651 aa26.49■■□□□ 1.83
CNN1-210ENST00000592923 SMARCA4P51532 1647 aa26.44■■□□□ 1.82
CNN1-210ENST00000592923 TOP2AP11388 1531 aaKnown RBP26.26■■□□□ 1.79
CNN1-210ENST00000592923 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
CNN1-210ENST00000592923 PEG3Q9GZU2 1588 aa26.11■■□□□ 1.77
CNN1-210ENST00000592923 EIF4G1Q04637 1599 aaKnown RBP26.08■■□□□ 1.77
CNN1-210ENST00000592923 SMARCA2P51531 1590 aa26.02■■□□□ 1.76
CNN1-210ENST00000592923 CCDC88BA6NC98 1476 aa25.94■■□□□ 1.74
CNN1-210ENST00000592923 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
CNN1-210ENST00000592923 ATAD2BQ9ULI0 1458 aa25.83■■□□□ 1.73
CNN1-210ENST00000592923 BAZ1BQ9UIG0 1483 aaKnown RBP25.73■■□□□ 1.71
CNN1-210ENST00000592923 LOC105371045A0A1W2PR82 267 aa25.64■■□□□ 1.7
CNN1-210ENST00000592923 HMGXB3Q12766 1538 aa25.59■■□□□ 1.69
CNN1-210ENST00000592923 ABCC8Q09428 1581 aa25.59■■□□□ 1.69
CNN1-210ENST00000592923 NCAPD3P42695 1498 aa25.51■■□□□ 1.68
CNN1-210ENST00000592923 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
CNN1-210ENST00000592923 WRNQ14191 1432 aaPredicted RBP eCLIP25.34■■□□□ 1.65
CNN1-210ENST00000592923 EEA1Q15075 1411 aa25.27■■□□□ 1.64
CNN1-210ENST00000592923 SYNJ1O43426 1573 aa25.26■■□□□ 1.63
CNN1-210ENST00000592923 SOGA1O94964 1423 aa25.18■■□□□ 1.62
CNN1-210ENST00000592923 CC2D2AQ9P2K1 1620 aa25.14■■□□□ 1.62
CNN1-210ENST00000592923 TOP2BQ02880 1626 aa25.12■■□□□ 1.61
CNN1-210ENST00000592923 CFTRP13569 1480 aa25.11■■□□□ 1.61
CNN1-210ENST00000592923 BIVM-ERCC5R4GMW8 1640 aa25.11■■□□□ 1.61
CNN1-210ENST00000592923 PRDM2Q13029 1718 aa25.1■■□□□ 1.61
CNN1-210ENST00000592923 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
CNN1-210ENST00000592923 EHMT2Q96KQ7 1210 aa25.02■■□□□ 1.6
CNN1-210ENST00000592923 PCGF6Q9BYE7 350 aa25.02■■□□□ 1.6
CNN1-210ENST00000592923 CSRNP3Q8WYN3 585 aa24.99■■□□□ 1.59
CNN1-210ENST00000592923 KIF21BO75037 1637 aa24.96■■□□□ 1.59
CNN1-210ENST00000592923 GOLGA3Q08378 1498 aa24.95■■□□□ 1.59
CNN1-210ENST00000592923 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
CNN1-210ENST00000592923 CUX1P39880 1505 aa24.92■■□□□ 1.58
CNN1-210ENST00000592923 TRIM26Q12899 539 aaPredicted RBP24.92■■□□□ 1.58
CNN1-210ENST00000592923 CEP164Q9UPV0 1460 aa24.9■■□□□ 1.58
CNN1-210ENST00000592923 CADPSQ9ULU8 1353 aa24.88■■□□□ 1.57
CNN1-210ENST00000592923 CEP162Q5TB80 1403 aa24.87■■□□□ 1.57
CNN1-210ENST00000592923 HRCP23327 699 aa24.77■■□□□ 1.56
CNN1-210ENST00000592923 UBTFP17480 764 aaKnown RBP24.7■■□□□ 1.54
CNN1-210ENST00000592923 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
CNN1-210ENST00000592923 RAPGEF2Q9Y4G8 1499 aa24.67■■□□□ 1.54
CNN1-210ENST00000592923 KIF27Q86VH2 1401 aa24.65■■□□□ 1.54
CNN1-210ENST00000592923 PRXQ9BXM0 1461 aa24.64■■□□□ 1.53
CNN1-210ENST00000592923 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.53
CNN1-210ENST00000592923 LAMC3Q9Y6N6 1575 aa24.6■■□□□ 1.53
CNN1-210ENST00000592923 FGD5Q6ZNL6 1462 aa24.55■■□□□ 1.52
CNN1-210ENST00000592923 DNMBPQ6XZF7 1577 aa24.55■■□□□ 1.52
CNN1-210ENST00000592923 CLIP1P30622 1438 aa24.54■■□□□ 1.52
CNN1-210ENST00000592923 NESP48681 1621 aa24.52■■□□□ 1.52
CNN1-210ENST00000592923 CUX2O14529 1486 aa24.48■■□□□ 1.51
CNN1-210ENST00000592923 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
CNN1-210ENST00000592923 VPS8Q8N3P4 1428 aa24.42■■□□□ 1.5
CNN1-210ENST00000592923 PPARGC1BQ86YN6 1023 aaKnown RBP24.38■■□□□ 1.49
CNN1-210ENST00000592923 POLA1P09884 1462 aaPredicted RBP24.37■■□□□ 1.49
CNN1-210ENST00000592923 ABCA10Q8WWZ4 1543 aa24.36■■□□□ 1.49
CNN1-210ENST00000592923 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
CNN1-210ENST00000592923 IGF1RP08069 1367 aa24.35■■□□□ 1.49
CNN1-210ENST00000592923 URB2Q14146 1524 aaKnown RBP24.32■■□□□ 1.48
CNN1-210ENST00000592923 WDR97A6NE52 1622 aa24.3■■□□□ 1.48
CNN1-210ENST00000592923 KIF21AQ7Z4S6 1674 aa24.28■■□□□ 1.48
CNN1-210ENST00000592923 ARAP1Q96P48 1450 aa24.28■■□□□ 1.48
CNN1-210ENST00000592923 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
CNN1-210ENST00000592923 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
CNN1-210ENST00000592923 CARMIL1Q5VZK9 1371 aa24.24■■□□□ 1.47
CNN1-210ENST00000592923 CUL7Q14999 1698 aa24.21■■□□□ 1.47
CNN1-210ENST00000592923 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
CNN1-210ENST00000592923 ABCA5Q8WWZ7 1642 aa24.16■■□□□ 1.46
CNN1-210ENST00000592923 ARHGAP35Q9NRY4 1499 aa24.16■■□□□ 1.46
CNN1-210ENST00000592923 RANGAP1P46060 587 aaPredicted RBP24.12■■□□□ 1.45
CNN1-210ENST00000592923 TTBK1Q5TCY1 1321 aaPredicted RBP24.11■■□□□ 1.45
CNN1-210ENST00000592923 APLP2Q06481 763 aa24.08■■□□□ 1.45
CNN1-210ENST00000592923 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
CNN1-210ENST00000592923 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
CNN1-210ENST00000592923 CTTNBP2Q8WZ74 1663 aa24.03■■□□□ 1.44
CNN1-210ENST00000592923 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
CNN1-210ENST00000592923 EFCAB5A4FU69 1503 aa23.97■■□□□ 1.43
CNN1-210ENST00000592923 TDRD9Q8NDG6 1382 aaKnown RBP23.94■■□□□ 1.42
CNN1-210ENST00000592923 WDR62O43379 1518 aa23.93■■□□□ 1.42
CNN1-210ENST00000592923 MAP3K1Q13233 1512 aa23.92■■□□□ 1.42
CNN1-210ENST00000592923 PBRM1Q86U86 1689 aa23.91■■□□□ 1.42
CNN1-210ENST00000592923 FHAD1B1AJZ9 1412 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms