RNA–Protein interactions for RNA: ENST00000323446.9

CPT1C-202, Transcript of carnitine palmitoyltransferase 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPT1C, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1C-202ENST00000323446 NISCHQ9Y2I1 1504 aa26.41■■□□□ 1.82
CPT1C-202ENST00000323446 HRCP23327 699 aa23.14■■□□□ 1.29
CPT1C-202ENST00000323446 SHROOM4Q9ULL8 1493 aa23.04■■□□□ 1.28
CPT1C-202ENST00000323446 PELP1Q8IZL8 1130 aaKnown RBP22.72■■□□□ 1.23
CPT1C-202ENST00000323446 PPARGC1BQ86YN6 1023 aaKnown RBP22.63■■□□□ 1.21
CPT1C-202ENST00000323446 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
CPT1C-202ENST00000323446 PCGF6Q9BYE7 350 aa22.52■■□□□ 1.2
CPT1C-202ENST00000323446 DCAF8L2P0C7V8 631 aa22.47■■□□□ 1.19
CPT1C-202ENST00000323446 MYO15BQ96JP2 1530 aa22.33■■□□□ 1.17
CPT1C-202ENST00000323446 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
CPT1C-202ENST00000323446 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
CPT1C-202ENST00000323446 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
CPT1C-202ENST00000323446 SCAF1Q9H7N4 1312 aaKnown RBP22.02■■□□□ 1.12
CPT1C-202ENST00000323446 DCAF1Q9Y4B6 1507 aa21.94■■□□□ 1.1
CPT1C-202ENST00000323446 MYT1Q01538 1121 aa21.91■■□□□ 1.1
CPT1C-202ENST00000323446 TRIM26Q12899 539 aaPredicted RBP21.74■■□□□ 1.07
CPT1C-202ENST00000323446 ZEB1P37275 1124 aaPredicted RBP21.66■■□□□ 1.06
CPT1C-202ENST00000323446 LOC105371045A0A1W2PR82 267 aa21.57■■□□□ 1.04
CPT1C-202ENST00000323446 ABCC9O60706 1549 aa21.43■■□□□ 1.02
CPT1C-202ENST00000323446 ACIN1Q9UKV3 1341 aaKnown RBP21.41■■□□□ 1.02
CPT1C-202ENST00000323446 NEUROD1Q13562 356 aa21.33■■□□□ 1
CPT1C-202ENST00000323446 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
CPT1C-202ENST00000323446 GTF3C3Q9Y5Q9 886 aa21.24■□□□□ 0.99
CPT1C-202ENST00000323446 CENPBP07199 599 aaPredicted RBP21.11■□□□□ 0.97
CPT1C-202ENST00000323446 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
CPT1C-202ENST00000323446 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
CPT1C-202ENST00000323446 FAM9AQ8IZU1 332 aaPredicted RBP20.93■□□□□ 0.94
CPT1C-202ENST00000323446 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
CPT1C-202ENST00000323446 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
CPT1C-202ENST00000323446 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
CPT1C-202ENST00000323446 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
CPT1C-202ENST00000323446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.78■□□□□ 0.92
CPT1C-202ENST00000323446 CCER1Q8TC90 406 aaPredicted RBP20.76■□□□□ 0.91
CPT1C-202ENST00000323446 NACADO15069 1562 aa20.71■□□□□ 0.91
CPT1C-202ENST00000323446 MROH2BQ7Z745 1585 aa20.67■□□□□ 0.9
CPT1C-202ENST00000323446 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
CPT1C-202ENST00000323446 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
CPT1C-202ENST00000323446 WIZO95785 1651 aa20.58■□□□□ 0.89
CPT1C-202ENST00000323446 BCL11AQ9H165 835 aa20.46■□□□□ 0.87
CPT1C-202ENST00000323446 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
CPT1C-202ENST00000323446 UNC13AQ9UPW8 1703 aa20.35■□□□□ 0.85
CPT1C-202ENST00000323446 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
CPT1C-202ENST00000323446 MIER1Q8N108 512 aa20.33■□□□□ 0.85
CPT1C-202ENST00000323446 ANP32EQ9BTT0 268 aa20.33■□□□□ 0.84
CPT1C-202ENST00000323446 BAZ1AQ9NRL2 1556 aaPredicted RBP20.25■□□□□ 0.83
CPT1C-202ENST00000323446 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
CPT1C-202ENST00000323446 SUPT16HQ9Y5B9 1047 aaKnown RBP20.17■□□□□ 0.82
CPT1C-202ENST00000323446 TSHZ2Q9NRE2 1034 aa20.15■□□□□ 0.82
CPT1C-202ENST00000323446 CLSPNQ9HAW4 1339 aa20.14■□□□□ 0.82
CPT1C-202ENST00000323446 CCDC88BA6NC98 1476 aa20.13■□□□□ 0.81
CPT1C-202ENST00000323446 SMARCA4P51532 1647 aa20.12■□□□□ 0.81
CPT1C-202ENST00000323446 CSRNP3Q8WYN3 585 aa20.11■□□□□ 0.81
CPT1C-202ENST00000323446 EIF4G1Q04637 1599 aaKnown RBP20.1■□□□□ 0.81
CPT1C-202ENST00000323446 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.81
CPT1C-202ENST00000323446 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
CPT1C-202ENST00000323446 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
CPT1C-202ENST00000323446 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.8
CPT1C-202ENST00000323446 SOGA1O94964 1423 aa20.01■□□□□ 0.79
CPT1C-202ENST00000323446 RUSC2Q8N2Y8 1516 aa19.96■□□□□ 0.79
CPT1C-202ENST00000323446 UBTFP17480 764 aaKnown RBP19.9■□□□□ 0.78
CPT1C-202ENST00000323446 CEP162Q5TB80 1403 aa19.86■□□□□ 0.77
CPT1C-202ENST00000323446 RANGAP1P46060 587 aaPredicted RBP19.82■□□□□ 0.76
CPT1C-202ENST00000323446 PRKCSHP14314 528 aaPredicted RBP19.78■□□□□ 0.76
CPT1C-202ENST00000323446 HNRNPUL2Q1KMD3 747 aaKnown RBP19.76■□□□□ 0.75
CPT1C-202ENST00000323446 BCANQ96GW7 911 aa19.7■□□□□ 0.74
CPT1C-202ENST00000323446 TNIKQ9UKE5 1360 aa19.68■□□□□ 0.74
CPT1C-202ENST00000323446 SYNJ1O43426 1573 aa19.65■□□□□ 0.74
CPT1C-202ENST00000323446 ATAD2BQ9ULI0 1458 aa19.65■□□□□ 0.74
CPT1C-202ENST00000323446 RBM19Q9Y4C8 960 aaKnown RBP19.64■□□□□ 0.73
CPT1C-202ENST00000323446 BAZ1BQ9UIG0 1483 aaKnown RBP19.62■□□□□ 0.73
CPT1C-202ENST00000323446 FKBP8Q14318 412 aa19.57■□□□□ 0.72
CPT1C-202ENST00000323446 GOLGA3Q08378 1498 aa19.57■□□□□ 0.72
CPT1C-202ENST00000323446 PEG3Q9GZU2 1588 aa19.55■□□□□ 0.72
CPT1C-202ENST00000323446 EEA1Q15075 1411 aa19.53■□□□□ 0.72
CPT1C-202ENST00000323446 MSH5O43196 834 aa19.49■□□□□ 0.71
CPT1C-202ENST00000323446 KCNH8Q96L42 1107 aa19.48■□□□□ 0.71
CPT1C-202ENST00000323446 RAPGEF2Q9Y4G8 1499 aa19.47■□□□□ 0.71
CPT1C-202ENST00000323446 CLIP1P30622 1438 aa19.45■□□□□ 0.7
CPT1C-202ENST00000323446 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
CPT1C-202ENST00000323446 NEFLP07196 543 aa19.42■□□□□ 0.7
CPT1C-202ENST00000323446 DHX57Q6P158 1386 aaKnown RBP19.41■□□□□ 0.7
CPT1C-202ENST00000323446 ITGAEP38570 1179 aa19.39■□□□□ 0.7
CPT1C-202ENST00000323446 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
CPT1C-202ENST00000323446 APLP2Q06481 763 aa19.34■□□□□ 0.69
CPT1C-202ENST00000323446 KIF21BO75037 1637 aa19.33■□□□□ 0.69
CPT1C-202ENST00000323446 FANCIQ9NVI1 1328 aa19.32■□□□□ 0.68
CPT1C-202ENST00000323446 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
CPT1C-202ENST00000323446 VPS8Q8N3P4 1428 aa19.28■□□□□ 0.68
CPT1C-202ENST00000323446 MYT1LQ9UL68 1186 aa19.27■□□□□ 0.67
CPT1C-202ENST00000323446 TOP2BQ02880 1626 aa19.27■□□□□ 0.67
CPT1C-202ENST00000323446 DEKP35659 375 aaKnown RBP19.24■□□□□ 0.67
CPT1C-202ENST00000323446 CUX1P39880 1505 aa19.21■□□□□ 0.67
CPT1C-202ENST00000323446 KANK4Q5T7N3 995 aaPredicted RBP19.21■□□□□ 0.67
CPT1C-202ENST00000323446 TRIM52Q96A61 297 aa19.17■□□□□ 0.66
CPT1C-202ENST00000323446 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
CPT1C-202ENST00000323446 ANO8Q9HCE9 1232 aaPredicted RBP19.15■□□□□ 0.66
CPT1C-202ENST00000323446 CDK11AQ9UQ88 783 aaPredicted RBP19.15■□□□□ 0.66
CPT1C-202ENST00000323446 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.65
CPT1C-202ENST00000323446 DDX10Q13206 875 aaKnown RBP19.14■□□□□ 0.65
CPT1C-202ENST00000323446 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms