RNA–Protein interactions for RNA: ENST00000371513.9

SCP2-202, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-202ENST00000371513 NISCHQ9Y2I1 1504 aa40.14■■■■■ 4.02
SCP2-202ENST00000371513 CCDC180Q9P1Z9 1646 aa35.04■■■■□ 3.2
SCP2-202ENST00000371513 ZCCHC6Q5VYS8 1495 aaKnown RBP33.67■■■□□ 2.98
SCP2-202ENST00000371513 ABCC9O60706 1549 aa33.42■■■□□ 2.94
SCP2-202ENST00000371513 DCAF8L2P0C7V8 631 aa33.36■■■□□ 2.93
SCP2-202ENST00000371513 DCAF1Q9Y4B6 1507 aa33.15■■■□□ 2.9
SCP2-202ENST00000371513 MYO15BQ96JP2 1530 aa32.83■■■□□ 2.85
SCP2-202ENST00000371513 NACADO15069 1562 aa32.72■■■□□ 2.83
SCP2-202ENST00000371513 SHROOM4Q9ULL8 1493 aa32.7■■■□□ 2.83
SCP2-202ENST00000371513 RB1CC1Q8TDY2 1594 aa32.5■■■□□ 2.79
SCP2-202ENST00000371513 SCRIBQ14160 1630 aa32.27■■■□□ 2.76
SCP2-202ENST00000371513 UNC13AQ9UPW8 1703 aa31.76■■■□□ 2.68
SCP2-202ENST00000371513 PABPN1Q86U42 306 aaKnown RBP eCLIP31.51■■■□□ 2.63
SCP2-202ENST00000371513 BICRAQ9NZM4 1560 aa31.49■■■□□ 2.63
SCP2-202ENST00000371513 SUPT5HO00267 1087 aaKnown RBP31.38■■■□□ 2.61
SCP2-202ENST00000371513 CECR2Q9BXF3 1484 aa31.23■■■□□ 2.59
SCP2-202ENST00000371513 RSF1Q96T23 1441 aaPredicted RBP31.08■■■□□ 2.57
SCP2-202ENST00000371513 MROH2BQ7Z745 1585 aa31.02■■■□□ 2.56
SCP2-202ENST00000371513 BAZ1AQ9NRL2 1556 aaPredicted RBP31.02■■■□□ 2.56
SCP2-202ENST00000371513 SMARCA4P51532 1647 aa30.89■■■□□ 2.53
SCP2-202ENST00000371513 WIZO95785 1651 aa30.74■■■□□ 2.51
SCP2-202ENST00000371513 EIF4G1Q04637 1599 aaKnown RBP30.59■■■□□ 2.49
SCP2-202ENST00000371513 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
SCP2-202ENST00000371513 ATAD2BQ9ULI0 1458 aa30.45■■■□□ 2.47
SCP2-202ENST00000371513 SMARCA2P51531 1590 aa30.42■■■□□ 2.46
SCP2-202ENST00000371513 TOP2AP11388 1531 aaKnown RBP30.42■■■□□ 2.46
SCP2-202ENST00000371513 BAZ1BQ9UIG0 1483 aaKnown RBP30.29■■■□□ 2.44
SCP2-202ENST00000371513 NCAPD3P42695 1498 aa30.21■■■□□ 2.43
SCP2-202ENST00000371513 CC2D2AQ9P2K1 1620 aa30.19■■■□□ 2.42
SCP2-202ENST00000371513 HMGXB3Q12766 1538 aa30.14■■■□□ 2.41
SCP2-202ENST00000371513 CCDC88BA6NC98 1476 aa30.12■■■□□ 2.41
SCP2-202ENST00000371513 CHIC1Q5VXU3 224 aa29.89■■■□□ 2.38
SCP2-202ENST00000371513 DNAJC5BQ9UF47 199 aa29.64■■■□□ 2.33
SCP2-202ENST00000371513 TRIM41Q8WV44 630 aa29.51■■■□□ 2.31
SCP2-202ENST00000371513 CFTRP13569 1480 aa29.49■■■□□ 2.31
SCP2-202ENST00000371513 CADPSQ9ULU8 1353 aa29.45■■■□□ 2.31
SCP2-202ENST00000371513 ABCC8Q09428 1581 aa29.44■■■□□ 2.3
SCP2-202ENST00000371513 WRNQ14191 1432 aaPredicted RBP eCLIP29.28■■■□□ 2.28
SCP2-202ENST00000371513 NESP48681 1621 aa29.26■■■□□ 2.27
SCP2-202ENST00000371513 PRDM2Q13029 1718 aa29.25■■■□□ 2.27
SCP2-202ENST00000371513 LAMC3Q9Y6N6 1575 aa29.21■■■□□ 2.27
SCP2-202ENST00000371513 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
SCP2-202ENST00000371513 FANCD2Q9BXW9 1451 aa29.13■■■□□ 2.25
SCP2-202ENST00000371513 PDS5BQ9NTI5 1447 aa29.04■■■□□ 2.24
SCP2-202ENST00000371513 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
SCP2-202ENST00000371513 CUX1P39880 1505 aa29.01■■■□□ 2.23
SCP2-202ENST00000371513 FAM9AQ8IZU1 332 aaPredicted RBP28.99■■■□□ 2.23
SCP2-202ENST00000371513 BIVM-ERCC5R4GMW8 1640 aa28.97■■■□□ 2.23
SCP2-202ENST00000371513 CEP164Q9UPV0 1460 aa28.97■■■□□ 2.23
SCP2-202ENST00000371513 SOGA1O94964 1423 aa28.86■■■□□ 2.21
SCP2-202ENST00000371513 KIF21AQ7Z4S6 1674 aa28.85■■■□□ 2.21
SCP2-202ENST00000371513 DNMBPQ6XZF7 1577 aa28.8■■■□□ 2.2
SCP2-202ENST00000371513 TOPBP1Q92547 1522 aa28.78■■■□□ 2.2
SCP2-202ENST00000371513 LOC105371045A0A1W2PR82 267 aa28.76■■■□□ 2.19
SCP2-202ENST00000371513 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
SCP2-202ENST00000371513 RUSC2Q8N2Y8 1516 aa28.75■■■□□ 2.19
SCP2-202ENST00000371513 EEA1Q15075 1411 aa28.74■■■□□ 2.19
SCP2-202ENST00000371513 FGD5Q6ZNL6 1462 aa28.74■■■□□ 2.19
SCP2-202ENST00000371513 ERCC6Q03468 1493 aa28.69■■■□□ 2.18
SCP2-202ENST00000371513 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
SCP2-202ENST00000371513 CSRNP3Q8WYN3 585 aa28.64■■■□□ 2.18
SCP2-202ENST00000371513 EHMT2Q96KQ7 1210 aa28.63■■■□□ 2.17
SCP2-202ENST00000371513 POLA1P09884 1462 aaPredicted RBP28.63■■■□□ 2.17
SCP2-202ENST00000371513 KIF27Q86VH2 1401 aa28.56■■■□□ 2.16
SCP2-202ENST00000371513 RAD54L2Q9Y4B4 1467 aa28.55■■■□□ 2.16
SCP2-202ENST00000371513 CUX2O14529 1486 aa28.54■■■□□ 2.16
SCP2-202ENST00000371513 WDR62O43379 1518 aa28.48■■■□□ 2.15
SCP2-202ENST00000371513 ABCA10Q8WWZ4 1543 aa28.46■■■□□ 2.15
SCP2-202ENST00000371513 THOC2Q8NI27 1593 aaKnown RBP28.43■■■□□ 2.14
SCP2-202ENST00000371513 GOLGA3Q08378 1498 aa28.35■■■□□ 2.13
SCP2-202ENST00000371513 KIF21BO75037 1637 aa28.35■■■□□ 2.13
SCP2-202ENST00000371513 WDR97A6NE52 1622 aa28.34■■■□□ 2.13
SCP2-202ENST00000371513 TARBP1Q13395 1621 aaKnown RBP28.33■■■□□ 2.13
SCP2-202ENST00000371513 IGF1RP08069 1367 aa28.32■■■□□ 2.12
SCP2-202ENST00000371513 TDRD9Q8NDG6 1382 aaKnown RBP28.32■■■□□ 2.12
SCP2-202ENST00000371513 UBTFP17480 764 aaKnown RBP28.3■■■□□ 2.12
SCP2-202ENST00000371513 PRXQ9BXM0 1461 aa28.29■■■□□ 2.12
SCP2-202ENST00000371513 IFT140Q96RY7 1462 aa28.28■■■□□ 2.12
SCP2-202ENST00000371513 RAPGEF2Q9Y4G8 1499 aa28.27■■■□□ 2.12
SCP2-202ENST00000371513 GAPVD1Q14C86 1478 aa28.23■■■□□ 2.11
SCP2-202ENST00000371513 ABCA5Q8WWZ7 1642 aa28.22■■■□□ 2.11
SCP2-202ENST00000371513 TNIKQ9UKE5 1360 aa28.22■■■□□ 2.11
SCP2-202ENST00000371513 ERICH3Q5RHP9 1530 aa28.2■■■□□ 2.1
SCP2-202ENST00000371513 CARMIL1Q5VZK9 1371 aa28.19■■■□□ 2.1
SCP2-202ENST00000371513 AQRO60306 1485 aaKnown RBP eCLIP28.15■■■□□ 2.1
SCP2-202ENST00000371513 ZNF608Q9ULD9 1512 aaPredicted RBP28.14■■■□□ 2.09
SCP2-202ENST00000371513 CUL7Q14999 1698 aa28.08■■■□□ 2.09
SCP2-202ENST00000371513 CEP162Q5TB80 1403 aa28.07■■■□□ 2.08
SCP2-202ENST00000371513 GRIN2BQ13224 1484 aa28.03■■■□□ 2.08
SCP2-202ENST00000371513 PBRM1Q86U86 1689 aa28.03■■■□□ 2.08
SCP2-202ENST00000371513 EIF4G3O43432 1585 aaKnown RBP28.01■■■□□ 2.07
SCP2-202ENST00000371513 RANGAP1P46060 587 aaPredicted RBP27.94■■■□□ 2.06
SCP2-202ENST00000371513 FHAD1B1AJZ9 1412 aa27.91■■■□□ 2.06
SCP2-202ENST00000371513 CLIP1P30622 1438 aa27.91■■■□□ 2.06
SCP2-202ENST00000371513 ADAMTS12P58397 1594 aa27.89■■■□□ 2.05
SCP2-202ENST00000371513 SNAPC4Q5SXM2 1469 aa27.88■■■□□ 2.05
SCP2-202ENST00000371513 MAGI1Q96QZ7 1491 aaPredicted RBP27.81■■■□□ 2.04
SCP2-202ENST00000371513 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
SCP2-202ENST00000371513 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
SCP2-202ENST00000371513 SYNJ2O15056 1496 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms