RNA–Protein interactions for RNA: ENST00000488906.1

AC002558.1-201, humanhuman

BASIC

Gene AC002558.1, Length 803 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002558.1-201ENST00000488906 NISCHQ9Y2I1 1504 aa40.98■■■■■ 4.15
AC002558.1-201ENST00000488906 CCDC180Q9P1Z9 1646 aa36.05■■■■□ 3.36
AC002558.1-201ENST00000488906 ZCCHC6Q5VYS8 1495 aaKnown RBP34.36■■■■□ 3.09
AC002558.1-201ENST00000488906 ABCC9O60706 1549 aa34.26■■■■□ 3.08
AC002558.1-201ENST00000488906 DCAF1Q9Y4B6 1507 aa34.04■■■■□ 3.04
AC002558.1-201ENST00000488906 MYO15BQ96JP2 1530 aa33.85■■■■□ 3.01
AC002558.1-201ENST00000488906 DCAF8L2P0C7V8 631 aa33.7■■■□□ 2.99
AC002558.1-201ENST00000488906 NACADO15069 1562 aa33.68■■■□□ 2.98
AC002558.1-201ENST00000488906 RB1CC1Q8TDY2 1594 aa33.47■■■□□ 2.95
AC002558.1-201ENST00000488906 SCRIBQ14160 1630 aa32.88■■■□□ 2.85
AC002558.1-201ENST00000488906 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
AC002558.1-201ENST00000488906 UNC13AQ9UPW8 1703 aa32.58■■■□□ 2.81
AC002558.1-201ENST00000488906 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
AC002558.1-201ENST00000488906 PABPN1Q86U42 306 aaKnown RBP eCLIP32.13■■■□□ 2.73
AC002558.1-201ENST00000488906 CECR2Q9BXF3 1484 aa31.74■■■□□ 2.67
AC002558.1-201ENST00000488906 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
AC002558.1-201ENST00000488906 SMARCA4P51532 1647 aa31.58■■■□□ 2.65
AC002558.1-201ENST00000488906 RSF1Q96T23 1441 aaPredicted RBP31.55■■■□□ 2.64
AC002558.1-201ENST00000488906 MROH2BQ7Z745 1585 aa31.55■■■□□ 2.64
AC002558.1-201ENST00000488906 EIF4G1Q04637 1599 aaKnown RBP31.46■■■□□ 2.63
AC002558.1-201ENST00000488906 SUPT5HO00267 1087 aaKnown RBP31.36■■■□□ 2.61
AC002558.1-201ENST00000488906 PEG3Q9GZU2 1588 aa31.32■■■□□ 2.6
AC002558.1-201ENST00000488906 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
AC002558.1-201ENST00000488906 WIZO95785 1651 aa31.22■■■□□ 2.59
AC002558.1-201ENST00000488906 ATAD2BQ9ULI0 1458 aa31.18■■■□□ 2.58
AC002558.1-201ENST00000488906 CC2D2AQ9P2K1 1620 aa31.06■■■□□ 2.56
AC002558.1-201ENST00000488906 TOP2AP11388 1531 aaKnown RBP31.05■■■□□ 2.56
AC002558.1-201ENST00000488906 NCAPD3P42695 1498 aa31.05■■■□□ 2.56
AC002558.1-201ENST00000488906 HMGXB3Q12766 1538 aa31.02■■■□□ 2.56
AC002558.1-201ENST00000488906 BAZ1BQ9UIG0 1483 aaKnown RBP30.99■■■□□ 2.55
AC002558.1-201ENST00000488906 CCDC88BA6NC98 1476 aa30.62■■■□□ 2.49
AC002558.1-201ENST00000488906 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.47
AC002558.1-201ENST00000488906 CFTRP13569 1480 aa30.21■■■□□ 2.43
AC002558.1-201ENST00000488906 CADPSQ9ULU8 1353 aa30.18■■■□□ 2.42
AC002558.1-201ENST00000488906 LAMC3Q9Y6N6 1575 aa30.09■■■□□ 2.41
AC002558.1-201ENST00000488906 PRDM2Q13029 1718 aa30.02■■■□□ 2.4
AC002558.1-201ENST00000488906 NESP48681 1621 aa29.9■■■□□ 2.38
AC002558.1-201ENST00000488906 CHIC1Q5VXU3 224 aa29.86■■■□□ 2.37
AC002558.1-201ENST00000488906 PDS5BQ9NTI5 1447 aa29.86■■■□□ 2.37
AC002558.1-201ENST00000488906 FANCD2Q9BXW9 1451 aa29.82■■■□□ 2.36
AC002558.1-201ENST00000488906 ABCC8Q09428 1581 aa29.74■■■□□ 2.35
AC002558.1-201ENST00000488906 WRNQ14191 1432 aaPredicted RBP eCLIP29.74■■■□□ 2.35
AC002558.1-201ENST00000488906 CEP164Q9UPV0 1460 aa29.72■■■□□ 2.35
AC002558.1-201ENST00000488906 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
AC002558.1-201ENST00000488906 TOP2BQ02880 1626 aa29.59■■■□□ 2.33
AC002558.1-201ENST00000488906 KIF21AQ7Z4S6 1674 aa29.59■■■□□ 2.33
AC002558.1-201ENST00000488906 SYNJ1O43426 1573 aa29.58■■■□□ 2.33
AC002558.1-201ENST00000488906 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
AC002558.1-201ENST00000488906 CUX1P39880 1505 aa29.55■■■□□ 2.32
AC002558.1-201ENST00000488906 DNMBPQ6XZF7 1577 aa29.52■■■□□ 2.32
AC002558.1-201ENST00000488906 ERCC6Q03468 1493 aa29.51■■■□□ 2.31
AC002558.1-201ENST00000488906 MRC2Q9UBG0 1479 aa29.48■■■□□ 2.31
AC002558.1-201ENST00000488906 TOPBP1Q92547 1522 aa29.45■■■□□ 2.3
AC002558.1-201ENST00000488906 URB2Q14146 1524 aaKnown RBP29.44■■■□□ 2.3
AC002558.1-201ENST00000488906 WDR62O43379 1518 aa29.35■■■□□ 2.29
AC002558.1-201ENST00000488906 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
AC002558.1-201ENST00000488906 FGD5Q6ZNL6 1462 aa29.32■■■□□ 2.28
AC002558.1-201ENST00000488906 POLA1P09884 1462 aaPredicted RBP29.26■■■□□ 2.27
AC002558.1-201ENST00000488906 EEA1Q15075 1411 aa29.21■■■□□ 2.27
AC002558.1-201ENST00000488906 SOGA1O94964 1423 aa29.14■■■□□ 2.26
AC002558.1-201ENST00000488906 ABCA10Q8WWZ4 1543 aa29.13■■■□□ 2.25
AC002558.1-201ENST00000488906 CUX2O14529 1486 aa29.07■■■□□ 2.24
AC002558.1-201ENST00000488906 KIF27Q86VH2 1401 aa29.07■■■□□ 2.24
AC002558.1-201ENST00000488906 IFT140Q96RY7 1462 aa29.07■■■□□ 2.24
AC002558.1-201ENST00000488906 RAD54L2Q9Y4B4 1467 aa29.06■■■□□ 2.24
AC002558.1-201ENST00000488906 TARBP1Q13395 1621 aaKnown RBP29.04■■■□□ 2.24
AC002558.1-201ENST00000488906 WDR97A6NE52 1622 aa29.03■■■□□ 2.24
AC002558.1-201ENST00000488906 RUSC2Q8N2Y8 1516 aa28.96■■■□□ 2.23
AC002558.1-201ENST00000488906 FAM9AQ8IZU1 332 aaPredicted RBP28.91■■■□□ 2.22
AC002558.1-201ENST00000488906 CSRNP3Q8WYN3 585 aa28.91■■■□□ 2.22
AC002558.1-201ENST00000488906 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
AC002558.1-201ENST00000488906 GAPVD1Q14C86 1478 aa28.84■■■□□ 2.21
AC002558.1-201ENST00000488906 TDRD9Q8NDG6 1382 aaKnown RBP28.82■■■□□ 2.2
AC002558.1-201ENST00000488906 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
AC002558.1-201ENST00000488906 IGF1RP08069 1367 aa28.78■■■□□ 2.2
AC002558.1-201ENST00000488906 KIF21BO75037 1637 aa28.77■■■□□ 2.2
AC002558.1-201ENST00000488906 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.19
AC002558.1-201ENST00000488906 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
AC002558.1-201ENST00000488906 GRIN2BQ13224 1484 aa28.74■■■□□ 2.19
AC002558.1-201ENST00000488906 PRXQ9BXM0 1461 aa28.74■■■□□ 2.19
AC002558.1-201ENST00000488906 AQRO60306 1485 aaKnown RBP eCLIP28.72■■■□□ 2.19
AC002558.1-201ENST00000488906 CUL7Q14999 1698 aa28.72■■■□□ 2.19
AC002558.1-201ENST00000488906 PBRM1Q86U86 1689 aa28.68■■■□□ 2.18
AC002558.1-201ENST00000488906 GOLGA3Q08378 1498 aa28.68■■■□□ 2.18
AC002558.1-201ENST00000488906 CARMIL1Q5VZK9 1371 aa28.65■■■□□ 2.18
AC002558.1-201ENST00000488906 RAPGEF2Q9Y4G8 1499 aa28.61■■■□□ 2.17
AC002558.1-201ENST00000488906 MAGI1Q96QZ7 1491 aaPredicted RBP28.59■■■□□ 2.17
AC002558.1-201ENST00000488906 FHAD1B1AJZ9 1412 aa28.58■■■□□ 2.17
AC002558.1-201ENST00000488906 ADAMTS12P58397 1594 aa28.57■■■□□ 2.16
AC002558.1-201ENST00000488906 LOC105371045A0A1W2PR82 267 aa28.55■■■□□ 2.16
AC002558.1-201ENST00000488906 SNAPC4Q5SXM2 1469 aa28.53■■■□□ 2.16
AC002558.1-201ENST00000488906 TNIKQ9UKE5 1360 aa28.5■■■□□ 2.15
AC002558.1-201ENST00000488906 SYNJ2O15056 1496 aa28.44■■■□□ 2.14
AC002558.1-201ENST00000488906 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
AC002558.1-201ENST00000488906 EHMT2Q96KQ7 1210 aa28.38■■■□□ 2.13
AC002558.1-201ENST00000488906 GRIN2AQ12879 1464 aa28.35■■■□□ 2.13
AC002558.1-201ENST00000488906 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
AC002558.1-201ENST00000488906 CTTNBP2Q8WZ74 1663 aa28.25■■■□□ 2.11
AC002558.1-201ENST00000488906 CEP162Q5TB80 1403 aa28.25■■■□□ 2.11
AC002558.1-201ENST00000488906 NUP160Q12769 1436 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms