RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 NISCHQ9Y2I1 1504 aa25.31■■□□□ 1.64
PPARGC1B-203ENST00000394320 DCAF8L2P0C7V8 631 aa25.28■■□□□ 1.64
PPARGC1B-203ENST00000394320 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
PPARGC1B-203ENST00000394320 SHROOM4Q9ULL8 1493 aa23.6■■□□□ 1.37
PPARGC1B-203ENST00000394320 APLP2Q06481 763 aa22.8■■□□□ 1.24
PPARGC1B-203ENST00000394320 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
PPARGC1B-203ENST00000394320 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
PPARGC1B-203ENST00000394320 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
PPARGC1B-203ENST00000394320 PELP1Q8IZL8 1130 aaKnown RBP22.18■■□□□ 1.14
PPARGC1B-203ENST00000394320 UBTFP17480 764 aaKnown RBP22.01■■□□□ 1.11
PPARGC1B-203ENST00000394320 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
PPARGC1B-203ENST00000394320 PCGF6Q9BYE7 350 aa21.98■■□□□ 1.11
PPARGC1B-203ENST00000394320 TTBK1Q5TCY1 1321 aaPredicted RBP21.9■■□□□ 1.1
PPARGC1B-203ENST00000394320 RANGAP1P46060 587 aaPredicted RBP21.9■■□□□ 1.1
PPARGC1B-203ENST00000394320 ATP1B4Q9UN42 357 aaPredicted RBP21.85■■□□□ 1.09
PPARGC1B-203ENST00000394320 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
PPARGC1B-203ENST00000394320 ABCC9O60706 1549 aa21.61■■□□□ 1.05
PPARGC1B-203ENST00000394320 CENPBP07199 599 aaPredicted RBP21.54■■□□□ 1.04
PPARGC1B-203ENST00000394320 CHIC1Q5VXU3 224 aa21.47■■□□□ 1.03
PPARGC1B-203ENST00000394320 TRIM26Q12899 539 aaPredicted RBP21.43■■□□□ 1.02
PPARGC1B-203ENST00000394320 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
PPARGC1B-203ENST00000394320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.25■□□□□ 0.99
PPARGC1B-203ENST00000394320 HNRNPUL2Q1KMD3 747 aaKnown RBP21.25■□□□□ 0.99
PPARGC1B-203ENST00000394320 PPARGC1BQ86YN6 1023 aaKnown RBP21.17■□□□□ 0.98
PPARGC1B-203ENST00000394320 LOC105371045A0A1W2PR82 267 aa21.14■□□□□ 0.97
PPARGC1B-203ENST00000394320 NEFLP07196 543 aa21.11■□□□□ 0.97
PPARGC1B-203ENST00000394320 MYT1LQ9UL68 1186 aa21.08■□□□□ 0.96
PPARGC1B-203ENST00000394320 ITGAEP38570 1179 aa21.04■□□□□ 0.96
PPARGC1B-203ENST00000394320 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
PPARGC1B-203ENST00000394320 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
PPARGC1B-203ENST00000394320 ERICH6Q7L0X2 663 aa20.96■□□□□ 0.95
PPARGC1B-203ENST00000394320 HRCP23327 699 aa20.93■□□□□ 0.94
PPARGC1B-203ENST00000394320 YTHDC1Q96MU7 727 aaKnown RBP20.8■□□□□ 0.92
PPARGC1B-203ENST00000394320 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
PPARGC1B-203ENST00000394320 FAM50AQ14320 339 aaKnown RBP20.73■□□□□ 0.91
PPARGC1B-203ENST00000394320 CSRNP3Q8WYN3 585 aa20.69■□□□□ 0.9
PPARGC1B-203ENST00000394320 POLR3GLQ9BT43 218 aa20.69■□□□□ 0.9
PPARGC1B-203ENST00000394320 TRIM52Q96A61 297 aa20.58■□□□□ 0.89
PPARGC1B-203ENST00000394320 FBLN2P98095 1184 aa20.58■□□□□ 0.88
PPARGC1B-203ENST00000394320 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
PPARGC1B-203ENST00000394320 CDK11AQ9UQ88 783 aaPredicted RBP20.47■□□□□ 0.87
PPARGC1B-203ENST00000394320 NACADO15069 1562 aa20.43■□□□□ 0.86
PPARGC1B-203ENST00000394320 DIEXFQ68CQ4 756 aaKnown RBP20.4■□□□□ 0.86
PPARGC1B-203ENST00000394320 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
PPARGC1B-203ENST00000394320 DAXXQ9UER7 740 aaPredicted RBP20.34■□□□□ 0.85
PPARGC1B-203ENST00000394320 NEUROD1Q13562 356 aa20.34■□□□□ 0.85
PPARGC1B-203ENST00000394320 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
PPARGC1B-203ENST00000394320 MYT1Q01538 1121 aa20.28■□□□□ 0.84
PPARGC1B-203ENST00000394320 CNGB1Q14028 1251 aaPredicted RBP20.27■□□□□ 0.84
PPARGC1B-203ENST00000394320 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
PPARGC1B-203ENST00000394320 ANP32CO43423 234 aa20.2■□□□□ 0.82
PPARGC1B-203ENST00000394320 ZNF326Q5BKZ1 582 aaKnown RBP20.17■□□□□ 0.82
PPARGC1B-203ENST00000394320 EEA1Q15075 1411 aa20.17■□□□□ 0.82
PPARGC1B-203ENST00000394320 RSF1Q96T23 1441 aaPredicted RBP20.14■□□□□ 0.82
PPARGC1B-203ENST00000394320 ZNF316A6NFI3 1004 aaPredicted RBP20.13■□□□□ 0.81
PPARGC1B-203ENST00000394320 ZNF777Q9ULD5 760 aaPredicted RBP20.13■□□□□ 0.81
PPARGC1B-203ENST00000394320 NPM1P06748 294 aaKnown RBP eCLIP20.12■□□□□ 0.81
PPARGC1B-203ENST00000394320 ARID3CA6NKF2 412 aa20.11■□□□□ 0.81
PPARGC1B-203ENST00000394320 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
PPARGC1B-203ENST00000394320 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
PPARGC1B-203ENST00000394320 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
PPARGC1B-203ENST00000394320 ESF1Q9H501 851 aaKnown RBP19.99■□□□□ 0.79
PPARGC1B-203ENST00000394320 CHMP7Q8WUX9 453 aaPredicted RBP19.98■□□□□ 0.79
PPARGC1B-203ENST00000394320 TONSLQ96HA7 1378 aa19.97■□□□□ 0.79
PPARGC1B-203ENST00000394320 NEFMP07197 916 aa19.96■□□□□ 0.79
PPARGC1B-203ENST00000394320 CLIP1P30622 1438 aa19.96■□□□□ 0.79
PPARGC1B-203ENST00000394320 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.783e-7■■■■□ 25.1
PPARGC1B-203ENST00000394320 MTUS2Q5JR59 1369 aa19.94■□□□□ 0.78
PPARGC1B-203ENST00000394320 ACIN1Q9UKV3 1341 aaKnown RBP19.94■□□□□ 0.78
PPARGC1B-203ENST00000394320 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
PPARGC1B-203ENST00000394320 BCANQ96GW7 911 aa19.92■□□□□ 0.78
PPARGC1B-203ENST00000394320 TSPY4P0CV99 314 aa19.9■□□□□ 0.78
PPARGC1B-203ENST00000394320 TSPY10P0CW01 314 aa19.9■□□□□ 0.78
PPARGC1B-203ENST00000394320 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
PPARGC1B-203ENST00000394320 ZBTB47Q9UFB7 747 aaPredicted RBP19.86■□□□□ 0.77
PPARGC1B-203ENST00000394320 STAG3Q9UJ98 1225 aa19.8■□□□□ 0.76
PPARGC1B-203ENST00000394320 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
PPARGC1B-203ENST00000394320 RTL5Q5HYW3 569 aaPredicted RBP19.77■□□□□ 0.76
PPARGC1B-203ENST00000394320 TNIKQ9UKE5 1360 aa19.74■□□□□ 0.75
PPARGC1B-203ENST00000394320 CEP162Q5TB80 1403 aa19.74■□□□□ 0.75
PPARGC1B-203ENST00000394320 CANXP27824 592 aaKnown RBP19.74■□□□□ 0.75
PPARGC1B-203ENST00000394320 CHGAP10645 457 aaKnown RBP19.74■□□□□ 0.75
PPARGC1B-203ENST00000394320 PLEKHD1A6NEE1 506 aa19.73■□□□□ 0.75
PPARGC1B-203ENST00000394320 CHIC2Q9UKJ5 165 aa19.72■□□□□ 0.75
PPARGC1B-203ENST00000394320 MYO15BQ96JP2 1530 aa19.7■□□□□ 0.74
PPARGC1B-203ENST00000394320 GTF3C3Q9Y5Q9 886 aa19.66■□□□□ 0.74
PPARGC1B-203ENST00000394320 CECR2Q9BXF3 1484 aa19.66■□□□□ 0.74
PPARGC1B-203ENST00000394320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.74
PPARGC1B-203ENST00000394320 ERCC6Q03468 1493 aa19.63■□□□□ 0.73
PPARGC1B-203ENST00000394320 SMARCA2P51531 1590 aa19.61■□□□□ 0.73
PPARGC1B-203ENST00000394320 SLC24A1O60721 1099 aa19.58■□□□□ 0.73
PPARGC1B-203ENST00000394320 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
PPARGC1B-203ENST00000394320 DDX10Q13206 875 aaKnown RBP19.53■□□□□ 0.72
PPARGC1B-203ENST00000394320 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
PPARGC1B-203ENST00000394320 KCNH8Q96L42 1107 aa19.5■□□□□ 0.71
PPARGC1B-203ENST00000394320 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.712e-6■■■■□ 20
PPARGC1B-203ENST00000394320 RRP7BPQ9NSQ0 103 aa19.49■□□□□ 0.71
PPARGC1B-203ENST00000394320 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
PPARGC1B-203ENST00000394320 TMC1Q8TDI8 760 aa19.48■□□□□ 0.71
PPARGC1B-203ENST00000394320 CUX2O14529 1486 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms