RNA–Protein interactions for RNA: ENST00000445752.5

CCDC144B-202, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2 BASIC

Gene CCDC144B, Length 2,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-202ENST00000445752 NISCHQ9Y2I1 1504 aa34.74■■■■□ 3.15
CCDC144B-202ENST00000445752 CCDC180Q9P1Z9 1646 aa29.93■■■□□ 2.38
CCDC144B-202ENST00000445752 ZCCHC6Q5VYS8 1495 aaKnown RBP29.28■■■□□ 2.28
CCDC144B-202ENST00000445752 SHROOM4Q9ULL8 1493 aa29.02■■■□□ 2.24
CCDC144B-202ENST00000445752 DCAF8L2P0C7V8 631 aa28.82■■■□□ 2.2
CCDC144B-202ENST00000445752 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
CCDC144B-202ENST00000445752 SUPT5HO00267 1087 aaKnown RBP28.18■■■□□ 2.1
CCDC144B-202ENST00000445752 ABCC9O60706 1549 aa28.07■■■□□ 2.08
CCDC144B-202ENST00000445752 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
CCDC144B-202ENST00000445752 SCRIBQ14160 1630 aa27.82■■■□□ 2.04
CCDC144B-202ENST00000445752 NACADO15069 1562 aa27.78■■■□□ 2.04
CCDC144B-202ENST00000445752 RB1CC1Q8TDY2 1594 aa27.45■■□□□ 1.98
CCDC144B-202ENST00000445752 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
CCDC144B-202ENST00000445752 CHIC1Q5VXU3 224 aa27.14■■□□□ 1.94
CCDC144B-202ENST00000445752 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
CCDC144B-202ENST00000445752 UNC13AQ9UPW8 1703 aa27■■□□□ 1.91
CCDC144B-202ENST00000445752 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
CCDC144B-202ENST00000445752 WIZO95785 1651 aa26.77■■□□□ 1.88
CCDC144B-202ENST00000445752 BAZ1AQ9NRL2 1556 aaPredicted RBP26.76■■□□□ 1.88
CCDC144B-202ENST00000445752 BICRAQ9NZM4 1560 aa26.66■■□□□ 1.86
CCDC144B-202ENST00000445752 PABPN1Q86U42 306 aaKnown RBP eCLIP26.65■■□□□ 1.86
CCDC144B-202ENST00000445752 SMARCA4P51532 1647 aa26.6■■□□□ 1.85
CCDC144B-202ENST00000445752 TOP2AP11388 1531 aaKnown RBP26.4■■□□□ 1.82
CCDC144B-202ENST00000445752 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
CCDC144B-202ENST00000445752 LOC105371045A0A1W2PR82 267 aa26.25■■□□□ 1.79
CCDC144B-202ENST00000445752 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
CCDC144B-202ENST00000445752 SMARCA2P51531 1590 aa26.21■■□□□ 1.79
CCDC144B-202ENST00000445752 EIF4G1Q04637 1599 aaKnown RBP26.18■■□□□ 1.78
CCDC144B-202ENST00000445752 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
CCDC144B-202ENST00000445752 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
CCDC144B-202ENST00000445752 FAM9AQ8IZU1 332 aaPredicted RBP26.03■■□□□ 1.76
CCDC144B-202ENST00000445752 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.74
CCDC144B-202ENST00000445752 ABCC8Q09428 1581 aa25.92■■□□□ 1.74
CCDC144B-202ENST00000445752 EHMT2Q96KQ7 1210 aa25.78■■□□□ 1.72
CCDC144B-202ENST00000445752 NCAPD3P42695 1498 aa25.66■■□□□ 1.7
CCDC144B-202ENST00000445752 HMGXB3Q12766 1538 aa25.65■■□□□ 1.7
CCDC144B-202ENST00000445752 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.7
CCDC144B-202ENST00000445752 WRNQ14191 1432 aaPredicted RBP eCLIP25.61■■□□□ 1.69
CCDC144B-202ENST00000445752 SOGA1O94964 1423 aa25.54■■□□□ 1.68
CCDC144B-202ENST00000445752 SYNJ1O43426 1573 aa25.5■■□□□ 1.67
CCDC144B-202ENST00000445752 RUSC2Q8N2Y8 1516 aa25.43■■□□□ 1.66
CCDC144B-202ENST00000445752 EEA1Q15075 1411 aa25.42■■□□□ 1.66
CCDC144B-202ENST00000445752 TRIM26Q12899 539 aaPredicted RBP25.37■■□□□ 1.65
CCDC144B-202ENST00000445752 CSRNP3Q8WYN3 585 aa25.37■■□□□ 1.65
CCDC144B-202ENST00000445752 CC2D2AQ9P2K1 1620 aa25.33■■□□□ 1.65
CCDC144B-202ENST00000445752 TOP2BQ02880 1626 aa25.28■■□□□ 1.64
CCDC144B-202ENST00000445752 CFTRP13569 1480 aa25.28■■□□□ 1.64
CCDC144B-202ENST00000445752 HRCP23327 699 aa25.25■■□□□ 1.63
CCDC144B-202ENST00000445752 BIVM-ERCC5R4GMW8 1640 aa25.22■■□□□ 1.63
CCDC144B-202ENST00000445752 TNIKQ9UKE5 1360 aa25.2■■□□□ 1.62
CCDC144B-202ENST00000445752 GOLGA3Q08378 1498 aa25.19■■□□□ 1.62
CCDC144B-202ENST00000445752 UBTFP17480 764 aaKnown RBP25.18■■□□□ 1.62
CCDC144B-202ENST00000445752 CEP162Q5TB80 1403 aa25.18■■□□□ 1.62
CCDC144B-202ENST00000445752 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
CCDC144B-202ENST00000445752 CUX1P39880 1505 aa25.13■■□□□ 1.61
CCDC144B-202ENST00000445752 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
CCDC144B-202ENST00000445752 KIF21BO75037 1637 aa25.1■■□□□ 1.61
CCDC144B-202ENST00000445752 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
CCDC144B-202ENST00000445752 PPARGC1BQ86YN6 1023 aaKnown RBP25.07■■□□□ 1.6
CCDC144B-202ENST00000445752 RAPGEF2Q9Y4G8 1499 aa24.97■■□□□ 1.59
CCDC144B-202ENST00000445752 KIF27Q86VH2 1401 aa24.89■■□□□ 1.57
CCDC144B-202ENST00000445752 FANCD2Q9BXW9 1451 aa24.86■■□□□ 1.57
CCDC144B-202ENST00000445752 CLIP1P30622 1438 aa24.85■■□□□ 1.57
CCDC144B-202ENST00000445752 PRXQ9BXM0 1461 aa24.83■■□□□ 1.57
CCDC144B-202ENST00000445752 NESP48681 1621 aa24.82■■□□□ 1.56
CCDC144B-202ENST00000445752 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
CCDC144B-202ENST00000445752 TTBK1Q5TCY1 1321 aaPredicted RBP24.8■■□□□ 1.56
CCDC144B-202ENST00000445752 FGD5Q6ZNL6 1462 aa24.78■■□□□ 1.56
CCDC144B-202ENST00000445752 RANGAP1P46060 587 aaPredicted RBP24.77■■□□□ 1.56
CCDC144B-202ENST00000445752 CUX2O14529 1486 aa24.75■■□□□ 1.55
CCDC144B-202ENST00000445752 LAMC3Q9Y6N6 1575 aa24.7■■□□□ 1.54
CCDC144B-202ENST00000445752 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
CCDC144B-202ENST00000445752 DNMBPQ6XZF7 1577 aa24.68■■□□□ 1.54
CCDC144B-202ENST00000445752 VPS8Q8N3P4 1428 aa24.67■■□□□ 1.54
CCDC144B-202ENST00000445752 TOPBP1Q92547 1522 aa24.64■■□□□ 1.53
CCDC144B-202ENST00000445752 IGF1RP08069 1367 aa24.63■■□□□ 1.53
CCDC144B-202ENST00000445752 POLA1P09884 1462 aaPredicted RBP24.57■■□□□ 1.52
CCDC144B-202ENST00000445752 ZEB1P37275 1124 aaPredicted RBP24.57■■□□□ 1.52
CCDC144B-202ENST00000445752 RAD54L2Q9Y4B4 1467 aa24.57■■□□□ 1.52
CCDC144B-202ENST00000445752 PDS5BQ9NTI5 1447 aa24.53■■□□□ 1.52
CCDC144B-202ENST00000445752 APLP2Q06481 763 aa24.53■■□□□ 1.52
CCDC144B-202ENST00000445752 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
CCDC144B-202ENST00000445752 URB2Q14146 1524 aaKnown RBP24.52■■□□□ 1.52
CCDC144B-202ENST00000445752 ARAP1Q96P48 1450 aa24.52■■□□□ 1.52
CCDC144B-202ENST00000445752 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
CCDC144B-202ENST00000445752 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
CCDC144B-202ENST00000445752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.42■■□□□ 1.5
CCDC144B-202ENST00000445752 ARHGAP35Q9NRY4 1499 aa24.41■■□□□ 1.5
CCDC144B-202ENST00000445752 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
CCDC144B-202ENST00000445752 CCER1Q8TC90 406 aaPredicted RBP24.36■■□□□ 1.49
CCDC144B-202ENST00000445752 CUL7Q14999 1698 aa24.32■■□□□ 1.48
CCDC144B-202ENST00000445752 TDRD9Q8NDG6 1382 aaKnown RBP24.3■■□□□ 1.48
CCDC144B-202ENST00000445752 ABCA5Q8WWZ7 1642 aa24.27■■□□□ 1.48
CCDC144B-202ENST00000445752 GAPVD1Q14C86 1478 aa24.24■■□□□ 1.47
CCDC144B-202ENST00000445752 KANK4Q5T7N3 995 aaPredicted RBP24.23■■□□□ 1.47
CCDC144B-202ENST00000445752 HNRNPUL2Q1KMD3 747 aaKnown RBP24.23■■□□□ 1.47
CCDC144B-202ENST00000445752 TARBP1Q13395 1621 aaKnown RBP24.2■■□□□ 1.46
CCDC144B-202ENST00000445752 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
CCDC144B-202ENST00000445752 CTTNBP2Q8WZ74 1663 aa24.17■■□□□ 1.46
CCDC144B-202ENST00000445752 P3H3Q8IVL6 736 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms