RNA–Protein interactions for RNA: ENST00000393187.5

MEST-204, mesoderm specific transcript, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MEST, Length 2,380 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-204ENST00000393187 NISCHQ9Y2I1 1504 aa29.24■■■□□ 2.27
MEST-204ENST00000393187 CCDC180Q9P1Z9 1646 aa25.42■■□□□ 1.66
MEST-204ENST00000393187 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
MEST-204ENST00000393187 DCAF1Q9Y4B6 1507 aa24.28■■□□□ 1.48
MEST-204ENST00000393187 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
MEST-204ENST00000393187 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.41
MEST-204ENST00000393187 DCAF8L2P0C7V8 631 aa23.85■■□□□ 1.41
MEST-204ENST00000393187 NACADO15069 1562 aa23.57■■□□□ 1.36
MEST-204ENST00000393187 ABCC9O60706 1549 aa23.54■■□□□ 1.36
MEST-204ENST00000393187 SCRIBQ14160 1630 aa23.28■■□□□ 1.32
MEST-204ENST00000393187 RB1CC1Q8TDY2 1594 aa23.26■■□□□ 1.31
MEST-204ENST00000393187 PELP1Q8IZL8 1130 aaKnown RBP23.23■■□□□ 1.31
MEST-204ENST00000393187 SUPT5HO00267 1087 aaKnown RBP23.2■■□□□ 1.3
MEST-204ENST00000393187 HRCP23327 699 aa22.91■■□□□ 1.26
MEST-204ENST00000393187 RSF1Q96T23 1441 aaPredicted RBP22.78■■□□□ 1.24
MEST-204ENST00000393187 UNC13AQ9UPW8 1703 aa22.78■■□□□ 1.24
MEST-204ENST00000393187 MYT1Q01538 1121 aa22.62■■□□□ 1.21
MEST-204ENST00000393187 CECR2Q9BXF3 1484 aa22.61■■□□□ 1.21
MEST-204ENST00000393187 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.21
MEST-204ENST00000393187 MROH2BQ7Z745 1585 aa22.55■■□□□ 1.2
MEST-204ENST00000393187 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
MEST-204ENST00000393187 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
MEST-204ENST00000393187 SMARCA4P51532 1647 aa22.41■■□□□ 1.18
MEST-204ENST00000393187 WIZO95785 1651 aa22.39■■□□□ 1.17
MEST-204ENST00000393187 TOP2AP11388 1531 aaKnown RBP22.23■■□□□ 1.15
MEST-204ENST00000393187 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
MEST-204ENST00000393187 PEG3Q9GZU2 1588 aa22.18■■□□□ 1.14
MEST-204ENST00000393187 PPARGC1BQ86YN6 1023 aaKnown RBP22.04■■□□□ 1.12
MEST-204ENST00000393187 SMARCA2P51531 1590 aa22.01■■□□□ 1.11
MEST-204ENST00000393187 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
MEST-204ENST00000393187 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
MEST-204ENST00000393187 ATAD2BQ9ULI0 1458 aa21.93■■□□□ 1.1
MEST-204ENST00000393187 PCGF6Q9BYE7 350 aa21.9■■□□□ 1.1
MEST-204ENST00000393187 TRIM41Q8WV44 630 aa21.87■■□□□ 1.09
MEST-204ENST00000393187 SCAF1Q9H7N4 1312 aaKnown RBP21.84■■□□□ 1.09
MEST-204ENST00000393187 BAZ1BQ9UIG0 1483 aaKnown RBP21.83■■□□□ 1.08
MEST-204ENST00000393187 HMGXB3Q12766 1538 aa21.76■■□□□ 1.07
MEST-204ENST00000393187 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
MEST-204ENST00000393187 ABCC8Q09428 1581 aa21.56■■□□□ 1.04
MEST-204ENST00000393187 LOC105371045A0A1W2PR82 267 aa21.53■■□□□ 1.04
MEST-204ENST00000393187 ZEB1P37275 1124 aaPredicted RBP21.52■■□□□ 1.04
MEST-204ENST00000393187 TTBK1Q5TCY1 1321 aaPredicted RBP21.47■■□□□ 1.03
MEST-204ENST00000393187 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
MEST-204ENST00000393187 EEA1Q15075 1411 aa21.42■■□□□ 1.02
MEST-204ENST00000393187 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
MEST-204ENST00000393187 FAM9AQ8IZU1 332 aaPredicted RBP21.36■■□□□ 1.01
MEST-204ENST00000393187 CFTRP13569 1480 aa21.33■■□□□ 1
MEST-204ENST00000393187 SYNJ1O43426 1573 aa21.32■■□□□ 1
MEST-204ENST00000393187 TRIM26Q12899 539 aaPredicted RBP21.32■■□□□ 1
MEST-204ENST00000393187 PRDM2Q13029 1718 aa21.32■■□□□ 1
MEST-204ENST00000393187 TOP2BQ02880 1626 aa21.27■■□□□ 1
MEST-204ENST00000393187 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
MEST-204ENST00000393187 ACIN1Q9UKV3 1341 aaKnown RBP21.26■□□□□ 0.99
MEST-204ENST00000393187 SOGA1O94964 1423 aa21.23■□□□□ 0.99
MEST-204ENST00000393187 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
MEST-204ENST00000393187 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
MEST-204ENST00000393187 RUSC2Q8N2Y8 1516 aa21.1■□□□□ 0.97
MEST-204ENST00000393187 KIF21BO75037 1637 aa21.09■□□□□ 0.97
MEST-204ENST00000393187 TNIKQ9UKE5 1360 aa21.08■□□□□ 0.96
MEST-204ENST00000393187 CUX1P39880 1505 aa21.07■□□□□ 0.96
MEST-204ENST00000393187 GOLGA3Q08378 1498 aa21.07■□□□□ 0.96
MEST-204ENST00000393187 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
MEST-204ENST00000393187 NEUROD1Q13562 356 aa21.02■□□□□ 0.96
MEST-204ENST00000393187 CENPBP07199 599 aaPredicted RBP20.99■□□□□ 0.95
MEST-204ENST00000393187 GTF3C3Q9Y5Q9 886 aa20.97■□□□□ 0.95
MEST-204ENST00000393187 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
MEST-204ENST00000393187 LAMC3Q9Y6N6 1575 aa20.95■□□□□ 0.94
MEST-204ENST00000393187 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
MEST-204ENST00000393187 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
MEST-204ENST00000393187 KIF27Q86VH2 1401 aa20.9■□□□□ 0.94
MEST-204ENST00000393187 ERICH3Q5RHP9 1530 aa20.9■□□□□ 0.94
MEST-204ENST00000393187 UBTFP17480 764 aaKnown RBP20.87■□□□□ 0.93
MEST-204ENST00000393187 PRXQ9BXM0 1461 aa20.85■□□□□ 0.93
MEST-204ENST00000393187 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.93
MEST-204ENST00000393187 RAPGEF2Q9Y4G8 1499 aa20.8■□□□□ 0.92
MEST-204ENST00000393187 FGD5Q6ZNL6 1462 aa20.79■□□□□ 0.92
MEST-204ENST00000393187 NESP48681 1621 aa20.77■□□□□ 0.92
MEST-204ENST00000393187 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
MEST-204ENST00000393187 TOPBP1Q92547 1522 aa20.74■□□□□ 0.91
MEST-204ENST00000393187 CUX2O14529 1486 aa20.72■□□□□ 0.91
MEST-204ENST00000393187 CLIP1P30622 1438 aa20.71■□□□□ 0.91
MEST-204ENST00000393187 ABCA10Q8WWZ4 1543 aa20.67■□□□□ 0.9
MEST-204ENST00000393187 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
MEST-204ENST00000393187 BCL11AQ9H165 835 aa20.64■□□□□ 0.89
MEST-204ENST00000393187 IGF1RP08069 1367 aa20.64■□□□□ 0.89
MEST-204ENST00000393187 URB2Q14146 1524 aaKnown RBP20.62■□□□□ 0.89
MEST-204ENST00000393187 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
MEST-204ENST00000393187 KIF21AQ7Z4S6 1674 aa20.59■□□□□ 0.89
MEST-204ENST00000393187 WDR97A6NE52 1622 aa20.58■□□□□ 0.89
MEST-204ENST00000393187 DNAJC5BQ9UF47 199 aa20.56■□□□□ 0.88
MEST-204ENST00000393187 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
MEST-204ENST00000393187 CUL7Q14999 1698 aa20.53■□□□□ 0.88
MEST-204ENST00000393187 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.88
MEST-204ENST00000393187 DIEXFQ68CQ4 756 aaKnown RBP20.52■□□□□ 0.88
MEST-204ENST00000393187 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
MEST-204ENST00000393187 ARAP1Q96P48 1450 aa20.45■□□□□ 0.86
MEST-204ENST00000393187 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
MEST-204ENST00000393187 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
MEST-204ENST00000393187 ARHGAP35Q9NRY4 1499 aa20.4■□□□□ 0.86
MEST-204ENST00000393187 ANP32EQ9BTT0 268 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms