Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 MIR6775-201ENST00000617557 69 ntBASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 SOCS2P1-201ENST00000417727 557 ntBASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 SLED1-202ENST00000512051 380 ntBASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 AC018665.1-201ENST00000622927 1362 ntBASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSX2IPQ9Y2D8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 CYP2T1P-202ENST00000641596 2535 ntBASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 TDH-203ENST00000531764 1110 ntBASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 PTP4A1P2-201ENST00000546033 454 ntBASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms