RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 NISCHQ9Y2I1 1504 aa27.34■■□□□ 1.97
ATP2A3-205ENST00000397041 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
ATP2A3-205ENST00000397041 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
ATP2A3-205ENST00000397041 SHROOM4Q9ULL8 1493 aa26.36■■□□□ 1.81
ATP2A3-205ENST00000397041 EHMT2Q96KQ7 1210 aa25.59■■□□□ 1.69
ATP2A3-205ENST00000397041 PCGF6Q9BYE7 350 aa25.53■■□□□ 1.68
ATP2A3-205ENST00000397041 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
ATP2A3-205ENST00000397041 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
ATP2A3-205ENST00000397041 HRCP23327 699 aa24.7■■□□□ 1.54
ATP2A3-205ENST00000397041 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
ATP2A3-205ENST00000397041 ZEB1P37275 1124 aaPredicted RBP24.5■■□□□ 1.51
ATP2A3-205ENST00000397041 PPARGC1BQ86YN6 1023 aaKnown RBP24.49■■□□□ 1.51
ATP2A3-205ENST00000397041 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
ATP2A3-205ENST00000397041 LOC105371045A0A1W2PR82 267 aa24.43■■□□□ 1.5
ATP2A3-205ENST00000397041 CCER1Q8TC90 406 aaPredicted RBP24.43■■□□□ 1.5
ATP2A3-205ENST00000397041 TRIM26Q12899 539 aaPredicted RBP24.31■■□□□ 1.48
ATP2A3-205ENST00000397041 APLP2Q06481 763 aa24.3■■□□□ 1.48
ATP2A3-205ENST00000397041 CENPBP07199 599 aaPredicted RBP24.3■■□□□ 1.48
ATP2A3-205ENST00000397041 PELP1Q8IZL8 1130 aaKnown RBP24.27■■□□□ 1.48
ATP2A3-205ENST00000397041 RANGAP1P46060 587 aaPredicted RBP24.15■■□□□ 1.46
ATP2A3-205ENST00000397041 YTHDC1Q96MU7 727 aaKnown RBP24.1■■□□□ 1.45
ATP2A3-205ENST00000397041 UBTFP17480 764 aaKnown RBP23.95■■□□□ 1.43
ATP2A3-205ENST00000397041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.71■■□□□ 1.39
ATP2A3-205ENST00000397041 MYT1Q01538 1121 aa23.5■■□□□ 1.35
ATP2A3-205ENST00000397041 HNRNPUL2Q1KMD3 747 aaKnown RBP23.5■■□□□ 1.35
ATP2A3-205ENST00000397041 ATP1B4Q9UN42 357 aaPredicted RBP23.5■■□□□ 1.35
ATP2A3-205ENST00000397041 DIEXFQ68CQ4 756 aaKnown RBP23.49■■□□□ 1.35
ATP2A3-205ENST00000397041 ERICH6Q7L0X2 663 aa23.41■■□□□ 1.34
ATP2A3-205ENST00000397041 NEFLP07196 543 aa23.32■■□□□ 1.32
ATP2A3-205ENST00000397041 GTF3C3Q9Y5Q9 886 aa23.32■■□□□ 1.32
ATP2A3-205ENST00000397041 ITGAEP38570 1179 aa23.31■■□□□ 1.32
ATP2A3-205ENST00000397041 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
ATP2A3-205ENST00000397041 MYO15BQ96JP2 1530 aa23.07■■□□□ 1.28
ATP2A3-205ENST00000397041 DCAF1Q9Y4B6 1507 aa22.96■■□□□ 1.27
ATP2A3-205ENST00000397041 ZNF316A6NFI3 1004 aaPredicted RBP22.91■■□□□ 1.26
ATP2A3-205ENST00000397041 SCAF1Q9H7N4 1312 aaKnown RBP22.9■■□□□ 1.26
ATP2A3-205ENST00000397041 BCANQ96GW7 911 aa22.83■■□□□ 1.25
ATP2A3-205ENST00000397041 NEUROD1Q13562 356 aa22.83■■□□□ 1.25
ATP2A3-205ENST00000397041 ZCCHC6Q5VYS8 1495 aaKnown RBP22.8■■□□□ 1.24
ATP2A3-205ENST00000397041 CNGB1Q14028 1251 aaPredicted RBP22.8■■□□□ 1.24
ATP2A3-205ENST00000397041 POLR3GLQ9BT43 218 aa22.72■■□□□ 1.23
ATP2A3-205ENST00000397041 ABCC9O60706 1549 aa22.66■■□□□ 1.22
ATP2A3-205ENST00000397041 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
ATP2A3-205ENST00000397041 FAM50AQ14320 339 aaKnown RBP22.61■■□□□ 1.21
ATP2A3-205ENST00000397041 CSRNP3Q8WYN3 585 aa22.61■■□□□ 1.21
ATP2A3-205ENST00000397041 MIER1Q8N108 512 aa22.42■■□□□ 1.18
ATP2A3-205ENST00000397041 ANP32CO43423 234 aa22.37■■□□□ 1.17
ATP2A3-205ENST00000397041 SCRIBQ14160 1630 aa22.36■■□□□ 1.17
ATP2A3-205ENST00000397041 TRIM52Q96A61 297 aa22.28■■□□□ 1.16
ATP2A3-205ENST00000397041 DAXXQ9UER7 740 aaPredicted RBP22.27■■□□□ 1.15
ATP2A3-205ENST00000397041 FKBP8Q14318 412 aa22.26■■□□□ 1.15
ATP2A3-205ENST00000397041 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
ATP2A3-205ENST00000397041 CDK11AQ9UQ88 783 aaPredicted RBP22.22■■□□□ 1.15
ATP2A3-205ENST00000397041 CCDC180Q9P1Z9 1646 aa22.22■■□□□ 1.15
ATP2A3-205ENST00000397041 RTL5Q5HYW3 569 aaPredicted RBP22.2■■□□□ 1.14
ATP2A3-205ENST00000397041 DDX10Q13206 875 aaKnown RBP22.19■■□□□ 1.14
ATP2A3-205ENST00000397041 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
ATP2A3-205ENST00000397041 ZNF326Q5BKZ1 582 aaKnown RBP22.1■■□□□ 1.13
ATP2A3-205ENST00000397041 HIRIP3Q9BW71 556 aaPredicted RBP22.02■■□□□ 1.12
ATP2A3-205ENST00000397041 CLSPNQ9HAW4 1339 aa22.02■■□□□ 1.12
ATP2A3-205ENST00000397041 CEP162Q5TB80 1403 aa22■■□□□ 1.11
ATP2A3-205ENST00000397041 HNRNPUQ00839 825 aaKnown RBP eCLIP21.98■■□□□ 1.11
ATP2A3-205ENST00000397041 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
ATP2A3-205ENST00000397041 MYT1LQ9UL68 1186 aa21.93■■□□□ 1.1
ATP2A3-205ENST00000397041 CLIP1P30622 1438 aa21.91■■□□□ 1.1
ATP2A3-205ENST00000397041 IRX6P78412 446 aaPredicted RBP21.88■■□□□ 1.09
ATP2A3-205ENST00000397041 TONSLQ96HA7 1378 aa21.85■■□□□ 1.09
ATP2A3-205ENST00000397041 FAM9BQ8IZU0 186 aa21.85■■□□□ 1.09
ATP2A3-205ENST00000397041 SLC4A1APQ9BWU0 796 aaKnown RBP21.8■■□□□ 1.08
ATP2A3-205ENST00000397041 NPM2Q86SE8 214 aaKnown RBP21.79■■□□□ 1.08
ATP2A3-205ENST00000397041 ANP32AP39687 249 aaKnown RBP21.75■■□□□ 1.07
ATP2A3-205ENST00000397041 TNIKQ9UKE5 1360 aa21.75■■□□□ 1.07
ATP2A3-205ENST00000397041 SUPT16HQ9Y5B9 1047 aaKnown RBP21.73■■□□□ 1.07
ATP2A3-205ENST00000397041 GOLGA3Q08378 1498 aa21.71■■□□□ 1.07
ATP2A3-205ENST00000397041 CHIC2Q9UKJ5 165 aa21.7■■□□□ 1.06
ATP2A3-205ENST00000397041 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
ATP2A3-205ENST00000397041 NBR1Q14596 966 aa21.68■■□□□ 1.06
ATP2A3-205ENST00000397041 ANP32EQ9BTT0 268 aa21.66■■□□□ 1.06
ATP2A3-205ENST00000397041 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
ATP2A3-205ENST00000397041 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.05
ATP2A3-205ENST00000397041 SOGA1O94964 1423 aa21.63■■□□□ 1.05
ATP2A3-205ENST00000397041 EEA1Q15075 1411 aa21.63■■□□□ 1.05
ATP2A3-205ENST00000397041 ZNF777Q9ULD5 760 aaPredicted RBP21.62■■□□□ 1.05
ATP2A3-205ENST00000397041 MRS2Q9HD23 443 aa21.61■■□□□ 1.05
ATP2A3-205ENST00000397041 SIN3AQ96ST3 1273 aa21.59■■□□□ 1.05
ATP2A3-205ENST00000397041 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.05
ATP2A3-205ENST00000397041 SENP3-EIF4A1A0A087X0R7 540 aa21.57■■□□□ 1.04
ATP2A3-205ENST00000397041 FBLN2P98095 1184 aa21.57■■□□□ 1.04
ATP2A3-205ENST00000397041 CCDC136Q96JN2 1154 aa21.57■■□□□ 1.04
ATP2A3-205ENST00000397041 RRP7BPQ9NSQ0 103 aa21.47■■□□□ 1.03
ATP2A3-205ENST00000397041 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
ATP2A3-205ENST00000397041 TMC1Q8TDI8 760 aa21.46■■□□□ 1.03
ATP2A3-205ENST00000397041 ZBTB47Q9UFB7 747 aaPredicted RBP21.46■■□□□ 1.03
ATP2A3-205ENST00000397041 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
ATP2A3-205ENST00000397041 MTUS2Q5JR59 1369 aa21.43■■□□□ 1.02
ATP2A3-205ENST00000397041 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.021e-9■■■■■ 47.3
ATP2A3-205ENST00000397041 CCDC88BA6NC98 1476 aa21.42■■□□□ 1.02
ATP2A3-205ENST00000397041 BCL11AQ9H165 835 aa21.42■■□□□ 1.02
ATP2A3-205ENST00000397041 EIF5BO60841 1220 aaKnown RBP21.4■■□□□ 1.02
ATP2A3-205ENST00000397041 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms