RNA–Protein interactions for RNA: ENST00000445279.5

LINC01939-201, Transcript of long intergenic non-protein coding RNA 1939, humanhuman

TSL 5 BASIC

Gene LINC01939, Length 694 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01939-201ENST00000445279 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
LINC01939-201ENST00000445279 ABCC9O60706 1549 aa33.75■■■□□ 2.99
LINC01939-201ENST00000445279 CCDC180Q9P1Z9 1646 aa33.64■■■□□ 2.98
LINC01939-201ENST00000445279 RB1CC1Q8TDY2 1594 aa32.11■■■□□ 2.73
LINC01939-201ENST00000445279 NACADO15069 1562 aa31.96■■■□□ 2.71
LINC01939-201ENST00000445279 DCAF8L2P0C7V8 631 aa31.96■■■□□ 2.71
LINC01939-201ENST00000445279 DNAJC5BQ9UF47 199 aa31.77■■■□□ 2.68
LINC01939-201ENST00000445279 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
LINC01939-201ENST00000445279 PABPN1Q86U42 306 aaKnown RBP eCLIP31.57■■■□□ 2.64
LINC01939-201ENST00000445279 ZCCHC6Q5VYS8 1495 aaKnown RBP31.29■■■□□ 2.6
LINC01939-201ENST00000445279 DCAF1Q9Y4B6 1507 aa31.22■■■□□ 2.59
LINC01939-201ENST00000445279 BICRAQ9NZM4 1560 aa31.17■■■□□ 2.58
LINC01939-201ENST00000445279 UNC13AQ9UPW8 1703 aa31.05■■■□□ 2.56
LINC01939-201ENST00000445279 SHROOM4Q9ULL8 1493 aa30.86■■■□□ 2.53
LINC01939-201ENST00000445279 SCRIBQ14160 1630 aa30.7■■■□□ 2.51
LINC01939-201ENST00000445279 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
LINC01939-201ENST00000445279 EIF4G1Q04637 1599 aaKnown RBP30.41■■■□□ 2.46
LINC01939-201ENST00000445279 CC2D2AQ9P2K1 1620 aa30.4■■■□□ 2.46
LINC01939-201ENST00000445279 NCAPD3P42695 1498 aa29.63■■■□□ 2.33
LINC01939-201ENST00000445279 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
LINC01939-201ENST00000445279 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
LINC01939-201ENST00000445279 SMARCA4P51532 1647 aa29.32■■■□□ 2.28
LINC01939-201ENST00000445279 BAZ1AQ9NRL2 1556 aaPredicted RBP29.27■■■□□ 2.28
LINC01939-201ENST00000445279 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
LINC01939-201ENST00000445279 BAZ1BQ9UIG0 1483 aaKnown RBP29.16■■■□□ 2.26
LINC01939-201ENST00000445279 DNAJC5Q9H3Z4 198 aa29.15■■■□□ 2.26
LINC01939-201ENST00000445279 ERCC6Q03468 1493 aa29.15■■■□□ 2.26
LINC01939-201ENST00000445279 PEG3Q9GZU2 1588 aa29.11■■■□□ 2.25
LINC01939-201ENST00000445279 CUX2O14529 1486 aa29.1■■■□□ 2.25
LINC01939-201ENST00000445279 MROH2BQ7Z745 1585 aa29.08■■■□□ 2.25
LINC01939-201ENST00000445279 NESP48681 1621 aa29.01■■■□□ 2.23
LINC01939-201ENST00000445279 LAMC3Q9Y6N6 1575 aa28.78■■■□□ 2.2
LINC01939-201ENST00000445279 PDS5BQ9NTI5 1447 aa28.77■■■□□ 2.2
LINC01939-201ENST00000445279 CADPSQ9ULU8 1353 aa28.75■■■□□ 2.19
LINC01939-201ENST00000445279 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
LINC01939-201ENST00000445279 WIZO95785 1651 aa28.59■■■□□ 2.17
LINC01939-201ENST00000445279 THOC2Q8NI27 1593 aaKnown RBP28.58■■■□□ 2.17
LINC01939-201ENST00000445279 MRC2Q9UBG0 1479 aa28.42■■■□□ 2.14
LINC01939-201ENST00000445279 CFTRP13569 1480 aa28.39■■■□□ 2.13
LINC01939-201ENST00000445279 KIF21AQ7Z4S6 1674 aa28.38■■■□□ 2.13
LINC01939-201ENST00000445279 TOP2AP11388 1531 aaKnown RBP28.33■■■□□ 2.13
LINC01939-201ENST00000445279 FANCD2Q9BXW9 1451 aa28.33■■■□□ 2.13
LINC01939-201ENST00000445279 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
LINC01939-201ENST00000445279 WDR62O43379 1518 aa28.31■■■□□ 2.12
LINC01939-201ENST00000445279 CCDC88BA6NC98 1476 aa28.11■■■□□ 2.09
LINC01939-201ENST00000445279 URB2Q14146 1524 aaKnown RBP28.06■■■□□ 2.08
LINC01939-201ENST00000445279 OSCARQ8IYS5 282 aa27.93■■■□□ 2.06
LINC01939-201ENST00000445279 TRIM41Q8WV44 630 aa27.8■■■□□ 2.04
LINC01939-201ENST00000445279 IFT140Q96RY7 1462 aa27.8■■■□□ 2.04
LINC01939-201ENST00000445279 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
LINC01939-201ENST00000445279 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
LINC01939-201ENST00000445279 ZNF608Q9ULD9 1512 aaPredicted RBP27.71■■■□□ 2.03
LINC01939-201ENST00000445279 PRDM2Q13029 1718 aa27.64■■■□□ 2.01
LINC01939-201ENST00000445279 DNMBPQ6XZF7 1577 aa27.6■■■□□ 2.01
LINC01939-201ENST00000445279 AQRO60306 1485 aaKnown RBP eCLIP27.52■■■□□ 2
LINC01939-201ENST00000445279 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
LINC01939-201ENST00000445279 SOGA1O94964 1423 aa27.46■■□□□ 1.99
LINC01939-201ENST00000445279 TARBP1Q13395 1621 aaKnown RBP27.43■■□□□ 1.98
LINC01939-201ENST00000445279 SUPT5HO00267 1087 aaKnown RBP27.42■■□□□ 1.98
LINC01939-201ENST00000445279 EIF4G3O43432 1585 aaKnown RBP27.41■■□□□ 1.98
LINC01939-201ENST00000445279 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
LINC01939-201ENST00000445279 TDRD9Q8NDG6 1382 aaKnown RBP27.41■■□□□ 1.98
LINC01939-201ENST00000445279 FBLN2P98095 1184 aa27.37■■□□□ 1.97
LINC01939-201ENST00000445279 FGD5Q6ZNL6 1462 aa27.32■■□□□ 1.96
LINC01939-201ENST00000445279 CUX1P39880 1505 aa27.3■■□□□ 1.96
LINC01939-201ENST00000445279 ARHGEF11O15085 1522 aa27.29■■□□□ 1.96
LINC01939-201ENST00000445279 RIMBP3CA6NJZ7 1639 aa27.25■■□□□ 1.95
LINC01939-201ENST00000445279 RIMBP3BA6NNM3 1639 aa27.25■■□□□ 1.95
LINC01939-201ENST00000445279 RIMBP3Q9UFD9 1639 aa27.25■■□□□ 1.95
LINC01939-201ENST00000445279 CYB5RLQ6IPT4 315 aa27.24■■□□□ 1.95
LINC01939-201ENST00000445279 CHMP7Q8WUX9 453 aaPredicted RBP27.22■■□□□ 1.95
LINC01939-201ENST00000445279 SNAPC4Q5SXM2 1469 aa27.18■■□□□ 1.94
LINC01939-201ENST00000445279 WDR97A6NE52 1622 aa27.17■■□□□ 1.94
LINC01939-201ENST00000445279 GRIN2BQ13224 1484 aa27.17■■□□□ 1.94
LINC01939-201ENST00000445279 MAGI1Q96QZ7 1491 aaPredicted RBP27.14■■□□□ 1.94
LINC01939-201ENST00000445279 GAPVD1Q14C86 1478 aa27.07■■□□□ 1.92
LINC01939-201ENST00000445279 SYNJ2O15056 1496 aa27.06■■□□□ 1.92
LINC01939-201ENST00000445279 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
LINC01939-201ENST00000445279 CHD1O14646 1710 aa27.05■■□□□ 1.92
LINC01939-201ENST00000445279 ARAP1Q96P48 1450 aa27.05■■□□□ 1.92
LINC01939-201ENST00000445279 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.92
LINC01939-201ENST00000445279 CLASP1Q7Z460 1538 aa26.97■■□□□ 1.91
LINC01939-201ENST00000445279 SYNJ1O43426 1573 aa26.94■■□□□ 1.9
LINC01939-201ENST00000445279 TRHP20396 242 aaPredicted RBP26.87■■□□□ 1.89
LINC01939-201ENST00000445279 ABCA5Q8WWZ7 1642 aa26.87■■□□□ 1.89
LINC01939-201ENST00000445279 TOP2BQ02880 1626 aa26.83■■□□□ 1.89
LINC01939-201ENST00000445279 GRIN2AQ12879 1464 aa26.79■■□□□ 1.88
LINC01939-201ENST00000445279 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
LINC01939-201ENST00000445279 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
LINC01939-201ENST00000445279 NUP160Q12769 1436 aa26.74■■□□□ 1.87
LINC01939-201ENST00000445279 PBRM1Q86U86 1689 aa26.74■■□□□ 1.87
LINC01939-201ENST00000445279 ERICH3Q5RHP9 1530 aa26.69■■□□□ 1.86
LINC01939-201ENST00000445279 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
LINC01939-201ENST00000445279 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
LINC01939-201ENST00000445279 JPH4Q96JJ6 628 aa26.58■■□□□ 1.85
LINC01939-201ENST00000445279 ERCC6L2Q5T890 1561 aa26.54■■□□□ 1.84
LINC01939-201ENST00000445279 IGF1RP08069 1367 aa26.53■■□□□ 1.84
LINC01939-201ENST00000445279 PRG4Q92954 1404 aaPredicted RBP26.48■■□□□ 1.83
LINC01939-201ENST00000445279 KIF27Q86VH2 1401 aa26.47■■□□□ 1.83
LINC01939-201ENST00000445279 SHROOM2Q13796 1616 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms