RNA–Protein interactions for RNA: ENST00000549518.5

SENP1-204, Transcript of SUMO specific peptidase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SENP1, Length 2,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP1-204ENST00000549518 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
SENP1-204ENST00000549518 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
SENP1-204ENST00000549518 ZCCHC6Q5VYS8 1495 aaKnown RBP30.66■■■□□ 2.5
SENP1-204ENST00000549518 SHROOM4Q9ULL8 1493 aa30.45■■■□□ 2.47
SENP1-204ENST00000549518 DCAF8L2P0C7V8 631 aa30.06■■■□□ 2.4
SENP1-204ENST00000549518 DCAF1Q9Y4B6 1507 aa29.89■■■□□ 2.37
SENP1-204ENST00000549518 SUPT5HO00267 1087 aaKnown RBP29.61■■■□□ 2.33
SENP1-204ENST00000549518 MYO15BQ96JP2 1530 aa29.22■■■□□ 2.27
SENP1-204ENST00000549518 ABCC9O60706 1549 aa29.19■■■□□ 2.26
SENP1-204ENST00000549518 SCRIBQ14160 1630 aa29.08■■■□□ 2.25
SENP1-204ENST00000549518 NACADO15069 1562 aa28.95■■■□□ 2.22
SENP1-204ENST00000549518 CHIC1Q5VXU3 224 aa28.6■■■□□ 2.17
SENP1-204ENST00000549518 RB1CC1Q8TDY2 1594 aa28.57■■■□□ 2.16
SENP1-204ENST00000549518 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
SENP1-204ENST00000549518 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.13
SENP1-204ENST00000549518 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
SENP1-204ENST00000549518 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.11
SENP1-204ENST00000549518 WIZO95785 1651 aa28.05■■■□□ 2.08
SENP1-204ENST00000549518 BAZ1AQ9NRL2 1556 aaPredicted RBP27.97■■■□□ 2.07
SENP1-204ENST00000549518 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
SENP1-204ENST00000549518 BICRAQ9NZM4 1560 aa27.81■■■□□ 2.04
SENP1-204ENST00000549518 PABPN1Q86U42 306 aaKnown RBP eCLIP27.74■■■□□ 2.03
SENP1-204ENST00000549518 LOC105371045A0A1W2PR82 267 aa27.68■■■□□ 2.02
SENP1-204ENST00000549518 TRIM41Q8WV44 630 aa27.66■■■□□ 2.02
SENP1-204ENST00000549518 TOP2AP11388 1531 aaKnown RBP27.63■■■□□ 2.01
SENP1-204ENST00000549518 EIF4G1Q04637 1599 aaKnown RBP27.51■■□□□ 1.99
SENP1-204ENST00000549518 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
SENP1-204ENST00000549518 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
SENP1-204ENST00000549518 FAM9AQ8IZU1 332 aaPredicted RBP27.36■■□□□ 1.97
SENP1-204ENST00000549518 PEG3Q9GZU2 1588 aa27.33■■□□□ 1.97
SENP1-204ENST00000549518 ABCC8Q09428 1581 aa27.2■■□□□ 1.95
SENP1-204ENST00000549518 ATAD2BQ9ULI0 1458 aa27.17■■□□□ 1.94
SENP1-204ENST00000549518 PCGF6Q9BYE7 350 aa27.14■■□□□ 1.94
SENP1-204ENST00000549518 EHMT2Q96KQ7 1210 aa27.09■■□□□ 1.93
SENP1-204ENST00000549518 BAZ1BQ9UIG0 1483 aaKnown RBP27.07■■□□□ 1.92
SENP1-204ENST00000549518 HRCP23327 699 aa26.84■■□□□ 1.89
SENP1-204ENST00000549518 SOGA1O94964 1423 aa26.81■■□□□ 1.88
SENP1-204ENST00000549518 WRNQ14191 1432 aaPredicted RBP eCLIP26.81■■□□□ 1.88
SENP1-204ENST00000549518 TRIM26Q12899 539 aaPredicted RBP26.8■■□□□ 1.88
SENP1-204ENST00000549518 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
SENP1-204ENST00000549518 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
SENP1-204ENST00000549518 SYNJ1O43426 1573 aa26.74■■□□□ 1.87
SENP1-204ENST00000549518 RUSC2Q8N2Y8 1516 aa26.71■■□□□ 1.87
SENP1-204ENST00000549518 EEA1Q15075 1411 aa26.66■■□□□ 1.86
SENP1-204ENST00000549518 CSRNP3Q8WYN3 585 aa26.6■■□□□ 1.85
SENP1-204ENST00000549518 TNIKQ9UKE5 1360 aa26.48■■□□□ 1.83
SENP1-204ENST00000549518 TOP2BQ02880 1626 aa26.48■■□□□ 1.83
SENP1-204ENST00000549518 CEP162Q5TB80 1403 aa26.47■■□□□ 1.83
SENP1-204ENST00000549518 GOLGA3Q08378 1498 aa26.43■■□□□ 1.82
SENP1-204ENST00000549518 PPARGC1BQ86YN6 1023 aaKnown RBP26.43■■□□□ 1.82
SENP1-204ENST00000549518 BIVM-ERCC5R4GMW8 1640 aa26.43■■□□□ 1.82
SENP1-204ENST00000549518 UBTFP17480 764 aaKnown RBP26.41■■□□□ 1.82
SENP1-204ENST00000549518 CFTRP13569 1480 aa26.38■■□□□ 1.81
SENP1-204ENST00000549518 KIF21BO75037 1637 aa26.36■■□□□ 1.81
SENP1-204ENST00000549518 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
SENP1-204ENST00000549518 CEP164Q9UPV0 1460 aa26.34■■□□□ 1.81
SENP1-204ENST00000549518 CUX1P39880 1505 aa26.3■■□□□ 1.8
SENP1-204ENST00000549518 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
SENP1-204ENST00000549518 RAPGEF2Q9Y4G8 1499 aa26.2■■□□□ 1.79
SENP1-204ENST00000549518 CADPSQ9ULU8 1353 aa26.16■■□□□ 1.78
SENP1-204ENST00000549518 TTBK1Q5TCY1 1321 aaPredicted RBP26.1■■□□□ 1.77
SENP1-204ENST00000549518 CLIP1P30622 1438 aa26.09■■□□□ 1.77
SENP1-204ENST00000549518 PRXQ9BXM0 1461 aa26.03■■□□□ 1.76
SENP1-204ENST00000549518 KIF27Q86VH2 1401 aa26.03■■□□□ 1.76
SENP1-204ENST00000549518 ERICH3Q5RHP9 1530 aa26.02■■□□□ 1.76
SENP1-204ENST00000549518 ZEB1P37275 1124 aaPredicted RBP25.99■■□□□ 1.75
SENP1-204ENST00000549518 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
SENP1-204ENST00000549518 VPS8Q8N3P4 1428 aa25.92■■□□□ 1.74
SENP1-204ENST00000549518 FANCD2Q9BXW9 1451 aa25.92■■□□□ 1.74
SENP1-204ENST00000549518 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
SENP1-204ENST00000549518 CUX2O14529 1486 aa25.87■■□□□ 1.73
SENP1-204ENST00000549518 NESP48681 1621 aa25.87■■□□□ 1.73
SENP1-204ENST00000549518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.8■■□□□ 1.72
SENP1-204ENST00000549518 IGF1RP08069 1367 aa25.77■■□□□ 1.72
SENP1-204ENST00000549518 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
SENP1-204ENST00000549518 ARAP1Q96P48 1450 aa25.76■■□□□ 1.71
SENP1-204ENST00000549518 LAMC3Q9Y6N6 1575 aa25.72■■□□□ 1.71
SENP1-204ENST00000549518 TOPBP1Q92547 1522 aa25.71■■□□□ 1.71
SENP1-204ENST00000549518 APLP2Q06481 763 aa25.71■■□□□ 1.71
SENP1-204ENST00000549518 CCER1Q8TC90 406 aaPredicted RBP25.7■■□□□ 1.7
SENP1-204ENST00000549518 DNAJC5BQ9UF47 199 aa25.7■■□□□ 1.7
SENP1-204ENST00000549518 RAD54L2Q9Y4B4 1467 aa25.67■■□□□ 1.7
SENP1-204ENST00000549518 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
SENP1-204ENST00000549518 CARMIL1Q5VZK9 1371 aa25.65■■□□□ 1.7
SENP1-204ENST00000549518 ARHGAP35Q9NRY4 1499 aa25.62■■□□□ 1.69
SENP1-204ENST00000549518 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
SENP1-204ENST00000549518 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
SENP1-204ENST00000549518 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
SENP1-204ENST00000549518 PDS5BQ9NTI5 1447 aa25.5■■□□□ 1.67
SENP1-204ENST00000549518 HNRNPUL2Q1KMD3 747 aaKnown RBP25.5■■□□□ 1.67
SENP1-204ENST00000549518 WDR97A6NE52 1622 aa25.5■■□□□ 1.67
SENP1-204ENST00000549518 KANK4Q5T7N3 995 aaPredicted RBP25.48■■□□□ 1.67
SENP1-204ENST00000549518 CUL7Q14999 1698 aa25.43■■□□□ 1.66
SENP1-204ENST00000549518 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
SENP1-204ENST00000549518 TDRD9Q8NDG6 1382 aaKnown RBP25.36■■□□□ 1.65
SENP1-204ENST00000549518 CTTNBP2Q8WZ74 1663 aa25.33■■□□□ 1.65
SENP1-204ENST00000549518 GAPVD1Q14C86 1478 aa25.29■■□□□ 1.64
SENP1-204ENST00000549518 P3H3Q8IVL6 736 aa25.28■■□□□ 1.64
SENP1-204ENST00000549518 TIAM1Q13009 1591 aa25.28■■□□□ 1.64
SENP1-204ENST00000549518 TARBP1Q13395 1621 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms