RNA–Protein interactions for RNA: ENST00000252595.11

SLC27A1-201, Transcript of solute carrier family 27 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC27A1, Length 3,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-201ENST00000252595 NISCHQ9Y2I1 1504 aa32.81■■■□□ 2.84
SLC27A1-201ENST00000252595 DCAF8L2P0C7V8 631 aa29.96■■■□□ 2.39
SLC27A1-201ENST00000252595 SHROOM4Q9ULL8 1493 aa29.83■■■□□ 2.37
SLC27A1-201ENST00000252595 SUPT5HO00267 1087 aaKnown RBP29.4■■■□□ 2.3
SLC27A1-201ENST00000252595 EHMT2Q96KQ7 1210 aa27.91■■■□□ 2.06
SLC27A1-201ENST00000252595 CHIC1Q5VXU3 224 aa27.52■■■□□ 2
SLC27A1-201ENST00000252595 FAM9AQ8IZU1 332 aaPredicted RBP27.49■■□□□ 1.99
SLC27A1-201ENST00000252595 ZCCHC6Q5VYS8 1495 aaKnown RBP27.48■■□□□ 1.99
SLC27A1-201ENST00000252595 LOC105371045A0A1W2PR82 267 aa27.36■■□□□ 1.97
SLC27A1-201ENST00000252595 PCGF6Q9BYE7 350 aa27.35■■□□□ 1.97
SLC27A1-201ENST00000252595 ABCC9O60706 1549 aa27.14■■□□□ 1.94
SLC27A1-201ENST00000252595 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
SLC27A1-201ENST00000252595 TRIM41Q8WV44 630 aa26.96■■□□□ 1.91
SLC27A1-201ENST00000252595 MYO15BQ96JP2 1530 aa26.91■■□□□ 1.9
SLC27A1-201ENST00000252595 PPARGC1BQ86YN6 1023 aaKnown RBP26.84■■□□□ 1.89
SLC27A1-201ENST00000252595 TTBK1Q5TCY1 1321 aaPredicted RBP26.83■■□□□ 1.89
SLC27A1-201ENST00000252595 SCRIBQ14160 1630 aa26.71■■□□□ 1.87
SLC27A1-201ENST00000252595 PABPN1Q86U42 306 aaKnown RBP eCLIP26.56■■□□□ 1.84
SLC27A1-201ENST00000252595 HRCP23327 699 aa26.44■■□□□ 1.82
SLC27A1-201ENST00000252595 RANGAP1P46060 587 aaPredicted RBP26.39■■□□□ 1.82
SLC27A1-201ENST00000252595 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
SLC27A1-201ENST00000252595 TRIM26Q12899 539 aaPredicted RBP26.15■■□□□ 1.78
SLC27A1-201ENST00000252595 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
SLC27A1-201ENST00000252595 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
SLC27A1-201ENST00000252595 UBTFP17480 764 aaKnown RBP26.05■■□□□ 1.76
SLC27A1-201ENST00000252595 RB1CC1Q8TDY2 1594 aa25.87■■□□□ 1.73
SLC27A1-201ENST00000252595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.8■■□□□ 1.72
SLC27A1-201ENST00000252595 CCER1Q8TC90 406 aaPredicted RBP25.79■■□□□ 1.72
SLC27A1-201ENST00000252595 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
SLC27A1-201ENST00000252595 NACADO15069 1562 aa25.61■■□□□ 1.69
SLC27A1-201ENST00000252595 WIZO95785 1651 aa25.54■■□□□ 1.68
SLC27A1-201ENST00000252595 APLP2Q06481 763 aa25.5■■□□□ 1.67
SLC27A1-201ENST00000252595 HNRNPUL2Q1KMD3 747 aaKnown RBP25.5■■□□□ 1.67
SLC27A1-201ENST00000252595 ZEB1P37275 1124 aaPredicted RBP25.39■■□□□ 1.65
SLC27A1-201ENST00000252595 CSRNP3Q8WYN3 585 aa25.38■■□□□ 1.65
SLC27A1-201ENST00000252595 ABCC8Q09428 1581 aa25.34■■□□□ 1.65
SLC27A1-201ENST00000252595 ATP1B4Q9UN42 357 aaPredicted RBP25.32■■□□□ 1.64
SLC27A1-201ENST00000252595 SOGA1O94964 1423 aa25.25■■□□□ 1.63
SLC27A1-201ENST00000252595 ITGAEP38570 1179 aa25.25■■□□□ 1.63
SLC27A1-201ENST00000252595 CCDC88BA6NC98 1476 aa25.22■■□□□ 1.63
SLC27A1-201ENST00000252595 BAZ1AQ9NRL2 1556 aaPredicted RBP25.2■■□□□ 1.62
SLC27A1-201ENST00000252595 YTHDC1Q96MU7 727 aaKnown RBP25.11■■□□□ 1.61
SLC27A1-201ENST00000252595 RUSC2Q8N2Y8 1516 aa25.06■■□□□ 1.6
SLC27A1-201ENST00000252595 CEP162Q5TB80 1403 aa24.98■■□□□ 1.59
SLC27A1-201ENST00000252595 P3H3Q8IVL6 736 aa24.93■■□□□ 1.58
SLC27A1-201ENST00000252595 WRNQ14191 1432 aaPredicted RBP eCLIP24.93■■□□□ 1.58
SLC27A1-201ENST00000252595 SMARCA4P51532 1647 aa24.88■■□□□ 1.57
SLC27A1-201ENST00000252595 DIEXFQ68CQ4 756 aaKnown RBP24.86■■□□□ 1.57
SLC27A1-201ENST00000252595 BAZ1BQ9UIG0 1483 aaKnown RBP24.83■■□□□ 1.57
SLC27A1-201ENST00000252595 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
SLC27A1-201ENST00000252595 SMARCA2P51531 1590 aa24.74■■□□□ 1.55
SLC27A1-201ENST00000252595 CLIP1P30622 1438 aa24.69■■□□□ 1.54
SLC27A1-201ENST00000252595 TNIKQ9UKE5 1360 aa24.69■■□□□ 1.54
SLC27A1-201ENST00000252595 ATAD2BQ9ULI0 1458 aa24.62■■□□□ 1.53
SLC27A1-201ENST00000252595 GOLGA3Q08378 1498 aa24.61■■□□□ 1.53
SLC27A1-201ENST00000252595 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
SLC27A1-201ENST00000252595 FAM50AQ14320 339 aaKnown RBP24.59■■□□□ 1.53
SLC27A1-201ENST00000252595 CENPBP07199 599 aaPredicted RBP24.51■■□□□ 1.51
SLC27A1-201ENST00000252595 BICRAQ9NZM4 1560 aa24.49■■□□□ 1.51
SLC27A1-201ENST00000252595 KANK4Q5T7N3 995 aaPredicted RBP24.48■■□□□ 1.51
SLC27A1-201ENST00000252595 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
SLC27A1-201ENST00000252595 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
SLC27A1-201ENST00000252595 UNC13AQ9UPW8 1703 aa24.46■■□□□ 1.51
SLC27A1-201ENST00000252595 ZNF316A6NFI3 1004 aaPredicted RBP24.46■■□□□ 1.51
SLC27A1-201ENST00000252595 NEUROD1Q13562 356 aa24.46■■□□□ 1.51
SLC27A1-201ENST00000252595 EEA1Q15075 1411 aa24.44■■□□□ 1.5
SLC27A1-201ENST00000252595 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
SLC27A1-201ENST00000252595 GTF3C3Q9Y5Q9 886 aa24.39■■□□□ 1.5
SLC27A1-201ENST00000252595 SYNJ1O43426 1573 aa24.34■■□□□ 1.49
SLC27A1-201ENST00000252595 MIER1Q8N108 512 aa24.3■■□□□ 1.48
SLC27A1-201ENST00000252595 ACIN1Q9UKV3 1341 aaKnown RBP24.26■■□□□ 1.47
SLC27A1-201ENST00000252595 HIRIP3Q9BW71 556 aaPredicted RBP24.24■■□□□ 1.47
SLC27A1-201ENST00000252595 KIF27Q86VH2 1401 aa24.2■■□□□ 1.47
SLC27A1-201ENST00000252595 VPS8Q8N3P4 1428 aa24.2■■□□□ 1.46
SLC27A1-201ENST00000252595 CUX2O14529 1486 aa24.19■■□□□ 1.46
SLC27A1-201ENST00000252595 CNGB1Q14028 1251 aaPredicted RBP24.19■■□□□ 1.46
SLC27A1-201ENST00000252595 DNAJC5BQ9UF47 199 aa24.17■■□□□ 1.46
SLC27A1-201ENST00000252595 EIF4G1Q04637 1599 aaKnown RBP24.16■■□□□ 1.46
SLC27A1-201ENST00000252595 FBLN2P98095 1184 aa24.12■■□□□ 1.45
SLC27A1-201ENST00000252595 CHIC2Q9UKJ5 165 aa24.05■■□□□ 1.44
SLC27A1-201ENST00000252595 CARMIL1Q5VZK9 1371 aa24.04■■□□□ 1.44
SLC27A1-201ENST00000252595 SIN3AQ96ST3 1273 aa24.04■■□□□ 1.44
SLC27A1-201ENST00000252595 TDRD9Q8NDG6 1382 aaKnown RBP23.99■■□□□ 1.43
SLC27A1-201ENST00000252595 TRIM52Q96A61 297 aa23.98■■□□□ 1.43
SLC27A1-201ENST00000252595 CADPSQ9ULU8 1353 aa23.97■■□□□ 1.43
SLC27A1-201ENST00000252595 KIF21BO75037 1637 aa23.93■■□□□ 1.42
SLC27A1-201ENST00000252595 DDX10Q13206 875 aaKnown RBP23.92■■□□□ 1.42
SLC27A1-201ENST00000252595 NCAPD3P42695 1498 aa23.92■■□□□ 1.42
SLC27A1-201ENST00000252595 CUX1P39880 1505 aa23.9■■□□□ 1.42
SLC27A1-201ENST00000252595 POLR3GLQ9BT43 218 aa23.9■■□□□ 1.42
SLC27A1-201ENST00000252595 IGF1RP08069 1367 aa23.89■■□□□ 1.41
SLC27A1-201ENST00000252595 ARAP1Q96P48 1450 aa23.88■■□□□ 1.41
SLC27A1-201ENST00000252595 RAD54L2Q9Y4B4 1467 aa23.88■■□□□ 1.41
SLC27A1-201ENST00000252595 NESP48681 1621 aa23.86■■□□□ 1.41
SLC27A1-201ENST00000252595 CCNB3Q8WWL7 1395 aa23.86■■□□□ 1.41
SLC27A1-201ENST00000252595 BCANQ96GW7 911 aa23.86■■□□□ 1.41
SLC27A1-201ENST00000252595 RRP7BPQ9NSQ0 103 aa23.85■■□□□ 1.41
SLC27A1-201ENST00000252595 FHOD3Q2V2M9 1422 aa23.82■■□□□ 1.4
SLC27A1-201ENST00000252595 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
SLC27A1-201ENST00000252595 ZNF777Q9ULD5 760 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms