Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCA5O60264 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCA5O60264 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SMARCA5O60264 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCA5O60264 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCA5O60264 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCA5O60264 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCA5O60264 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCA5O60264 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCA5O60264 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCA5O60264 TSPY26P-202ENST00000565928 3884 ntBASIC19.41■□□□□ 0.7
SMARCA5O60264 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCA5O60264 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMARCA5O60264 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SMARCA5O60264 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCA5O60264 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCA5O60264 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCA5O60264 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCA5O60264 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.4■□□□□ 0.7
SMARCA5O60264 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCA5O60264 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMARCA5O60264 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCA5O60264 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SMARCA5O60264 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SMARCA5O60264 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.4■□□□□ 0.7
SMARCA5O60264 SDHAP3-202ENST00000515467 728 ntBASIC19.4■□□□□ 0.7
SMARCA5O60264 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.4■□□□□ 0.7
SMARCA5O60264 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCA5O60264 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCA5O60264 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.4■□□□□ 0.7
SMARCA5O60264 AC074044.1-201ENST00000609673 707 ntBASIC19.4■□□□□ 0.7
SMARCA5O60264 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCA5O60264 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCA5O60264 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCA5O60264 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCA5O60264 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCA5O60264 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
SMARCA5O60264 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCA5O60264 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCA5O60264 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCA5O60264 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCA5O60264 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCA5O60264 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SMARCA5O60264 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCA5O60264 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SMARCA5O60264 AL109954.1-202ENST00000564051 2148 ntBASIC19.39■□□□□ 0.69
SMARCA5O60264 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SMARCA5O60264 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCA5O60264 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.39■□□□□ 0.69
SMARCA5O60264 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.39■□□□□ 0.69
SMARCA5O60264 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 FAM8A3P-201ENST00000427218 844 ntBASIC19.39■□□□□ 0.69
SMARCA5O60264 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCA5O60264 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.39■□□□□ 0.69
SMARCA5O60264 SLED1-202ENST00000512051 380 ntBASIC19.39■□□□□ 0.69
SMARCA5O60264 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.39■□□□□ 0.69
SMARCA5O60264 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCA5O60264 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCA5O60264 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms