RNA–Protein interactions for RNA: ENST00000621413.4

YTHDF3-212, Transcript of YTH N6-methyladenosine RNA binding protein 3, humanhuman

TSL 5 BASIC

Gene YTHDF3, Length 2,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3-212ENST00000621413 NISCHQ9Y2I1 1504 aa33.8■■■■□ 3
YTHDF3-212ENST00000621413 CCDC180Q9P1Z9 1646 aa29.91■■■□□ 2.38
YTHDF3-212ENST00000621413 PELP1Q8IZL8 1130 aaKnown RBP29.49■■■□□ 2.31
YTHDF3-212ENST00000621413 ABCC9O60706 1549 aa29.34■■■□□ 2.29
YTHDF3-212ENST00000621413 MYT1Q01538 1121 aa28.86■■■□□ 2.21
YTHDF3-212ENST00000621413 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
YTHDF3-212ENST00000621413 HRCP23327 699 aa28.19■■■□□ 2.1
YTHDF3-212ENST00000621413 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
YTHDF3-212ENST00000621413 RB1CC1Q8TDY2 1594 aa28.15■■■□□ 2.1
YTHDF3-212ENST00000621413 NACADO15069 1562 aa28.13■■■□□ 2.09
YTHDF3-212ENST00000621413 MYO15BQ96JP2 1530 aa27.93■■■□□ 2.06
YTHDF3-212ENST00000621413 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
YTHDF3-212ENST00000621413 TTBK1Q5TCY1 1321 aaPredicted RBP27.62■■■□□ 2.01
YTHDF3-212ENST00000621413 UNC13AQ9UPW8 1703 aa27.54■■■□□ 2
YTHDF3-212ENST00000621413 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.99
YTHDF3-212ENST00000621413 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
YTHDF3-212ENST00000621413 SCAF1Q9H7N4 1312 aaKnown RBP27.37■■□□□ 1.97
YTHDF3-212ENST00000621413 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
YTHDF3-212ENST00000621413 PPARGC1BQ86YN6 1023 aaKnown RBP27.27■■□□□ 1.96
YTHDF3-212ENST00000621413 SHROOM4Q9ULL8 1493 aa26.98■■□□□ 1.91
YTHDF3-212ENST00000621413 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
YTHDF3-212ENST00000621413 PCGF6Q9BYE7 350 aa26.69■■□□□ 1.86
YTHDF3-212ENST00000621413 PRKCSHP14314 528 aaPredicted RBP26.63■■□□□ 1.85
YTHDF3-212ENST00000621413 EIF4G1Q04637 1599 aaKnown RBP26.6■■□□□ 1.85
YTHDF3-212ENST00000621413 BCL11AQ9H165 835 aa26.52■■□□□ 1.84
YTHDF3-212ENST00000621413 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
YTHDF3-212ENST00000621413 CECR2Q9BXF3 1484 aa26.4■■□□□ 1.82
YTHDF3-212ENST00000621413 ACIN1Q9UKV3 1341 aaKnown RBP26.32■■□□□ 1.8
YTHDF3-212ENST00000621413 FAM9AQ8IZU1 332 aaPredicted RBP26.24■■□□□ 1.79
YTHDF3-212ENST00000621413 SMARCA4P51532 1647 aa26.2■■□□□ 1.79
YTHDF3-212ENST00000621413 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
YTHDF3-212ENST00000621413 CENPBP07199 599 aaPredicted RBP26.16■■□□□ 1.78
YTHDF3-212ENST00000621413 ERICH6Q7L0X2 663 aa26.15■■□□□ 1.78
YTHDF3-212ENST00000621413 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
YTHDF3-212ENST00000621413 NEUROD1Q13562 356 aa26.09■■□□□ 1.77
YTHDF3-212ENST00000621413 GTF3C3Q9Y5Q9 886 aa26.07■■□□□ 1.76
YTHDF3-212ENST00000621413 ZEB1P37275 1124 aaPredicted RBP26.06■■□□□ 1.76
YTHDF3-212ENST00000621413 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
YTHDF3-212ENST00000621413 APLP2Q06481 763 aa26.04■■□□□ 1.76
YTHDF3-212ENST00000621413 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
YTHDF3-212ENST00000621413 NCAPD3P42695 1498 aa25.97■■□□□ 1.75
YTHDF3-212ENST00000621413 PEG3Q9GZU2 1588 aa25.88■■□□□ 1.73
YTHDF3-212ENST00000621413 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
YTHDF3-212ENST00000621413 WIZO95785 1651 aa25.84■■□□□ 1.73
YTHDF3-212ENST00000621413 RSF1Q96T23 1441 aaPredicted RBP25.84■■□□□ 1.73
YTHDF3-212ENST00000621413 HMGXB3Q12766 1538 aa25.83■■□□□ 1.73
YTHDF3-212ENST00000621413 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
YTHDF3-212ENST00000621413 ANP32EQ9BTT0 268 aa25.64■■□□□ 1.7
YTHDF3-212ENST00000621413 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
YTHDF3-212ENST00000621413 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
YTHDF3-212ENST00000621413 NESP48681 1621 aa25.43■■□□□ 1.66
YTHDF3-212ENST00000621413 CSRNP3Q8WYN3 585 aa25.31■■□□□ 1.64
YTHDF3-212ENST00000621413 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
YTHDF3-212ENST00000621413 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
YTHDF3-212ENST00000621413 CCDC88BA6NC98 1476 aa25.26■■□□□ 1.63
YTHDF3-212ENST00000621413 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
YTHDF3-212ENST00000621413 LAMC3Q9Y6N6 1575 aa25.25■■□□□ 1.63
YTHDF3-212ENST00000621413 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
YTHDF3-212ENST00000621413 CFTRP13569 1480 aa25.12■■□□□ 1.61
YTHDF3-212ENST00000621413 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
YTHDF3-212ENST00000621413 DIEXFQ68CQ4 756 aaKnown RBP25.03■■□□□ 1.6
YTHDF3-212ENST00000621413 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
YTHDF3-212ENST00000621413 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
YTHDF3-212ENST00000621413 THOC2Q8NI27 1593 aaKnown RBP24.91■■□□□ 1.58
YTHDF3-212ENST00000621413 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
YTHDF3-212ENST00000621413 SLC24A1O60721 1099 aa24.86■■□□□ 1.57
YTHDF3-212ENST00000621413 MRC2Q9UBG0 1479 aa24.86■■□□□ 1.57
YTHDF3-212ENST00000621413 CUX2O14529 1486 aa24.84■■□□□ 1.57
YTHDF3-212ENST00000621413 TSHZ2Q9NRE2 1034 aa24.84■■□□□ 1.57
YTHDF3-212ENST00000621413 WDR62O43379 1518 aa24.75■■□□□ 1.55
YTHDF3-212ENST00000621413 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
YTHDF3-212ENST00000621413 CLSPNQ9HAW4 1339 aa24.7■■□□□ 1.55
YTHDF3-212ENST00000621413 LOC105371045A0A1W2PR82 267 aa24.7■■□□□ 1.54
YTHDF3-212ENST00000621413 ANO8Q9HCE9 1232 aaPredicted RBP24.65■■□□□ 1.54
YTHDF3-212ENST00000621413 TOPBP1Q92547 1522 aa24.6■■□□□ 1.53
YTHDF3-212ENST00000621413 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
YTHDF3-212ENST00000621413 UBE2Q2Q8WVN8 375 aa24.58■■□□□ 1.53
YTHDF3-212ENST00000621413 DNMBPQ6XZF7 1577 aa24.55■■□□□ 1.52
YTHDF3-212ENST00000621413 YTHDC1Q96MU7 727 aaKnown RBP24.54■■□□□ 1.52
YTHDF3-212ENST00000621413 SUPT16HQ9Y5B9 1047 aaKnown RBP24.54■■□□□ 1.52
YTHDF3-212ENST00000621413 ABCC8Q09428 1581 aa24.52■■□□□ 1.52
YTHDF3-212ENST00000621413 CUX1P39880 1505 aa24.47■■□□□ 1.51
YTHDF3-212ENST00000621413 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
YTHDF3-212ENST00000621413 EIF5BO60841 1220 aaKnown RBP24.4■■□□□ 1.5
YTHDF3-212ENST00000621413 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
YTHDF3-212ENST00000621413 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
YTHDF3-212ENST00000621413 WRNQ14191 1432 aaPredicted RBP eCLIP24.36■■□□□ 1.49
YTHDF3-212ENST00000621413 RAD54L2Q9Y4B4 1467 aa24.35■■□□□ 1.49
YTHDF3-212ENST00000621413 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
YTHDF3-212ENST00000621413 DAXXQ9UER7 740 aaPredicted RBP24.32■■□□□ 1.48
YTHDF3-212ENST00000621413 SOGA1O94964 1423 aa24.32■■□□□ 1.48
YTHDF3-212ENST00000621413 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
YTHDF3-212ENST00000621413 TARBP1Q13395 1621 aaKnown RBP24.29■■□□□ 1.48
YTHDF3-212ENST00000621413 MYT1LQ9UL68 1186 aa24.27■■□□□ 1.48
YTHDF3-212ENST00000621413 ZNF316A6NFI3 1004 aaPredicted RBP24.26■■□□□ 1.47
YTHDF3-212ENST00000621413 CCER1Q8TC90 406 aaPredicted RBP24.25■■□□□ 1.47
YTHDF3-212ENST00000621413 TOP2BQ02880 1626 aa24.25■■□□□ 1.47
YTHDF3-212ENST00000621413 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.472e-8■■■■■ 95.2
YTHDF3-212ENST00000621413 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
YTHDF3-212ENST00000621413 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms