RNA–Protein interactions for RNA: ENST00000621413.4

YTHDF3-212, Transcript of YTH N6-methyladenosine RNA binding protein 3, humanhuman

TSL 5 BASIC

Gene YTHDF3, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3-212ENST00000621413 NISCHQ9Y2I1 1504 aa33.8■■■■□ 3
YTHDF3-212ENST00000621413 CCDC180Q9P1Z9 1646 aa29.91■■■□□ 2.38
YTHDF3-212ENST00000621413 PELP1Q8IZL8 1130 aaKnown RBP29.49■■■□□ 2.31
YTHDF3-212ENST00000621413 ABCC9O60706 1549 aa29.34■■■□□ 2.29
YTHDF3-212ENST00000621413 MYT1Q01538 1121 aa28.86■■■□□ 2.21
YTHDF3-212ENST00000621413 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
YTHDF3-212ENST00000621413 HRCP23327 699 aa28.19■■■□□ 2.1
YTHDF3-212ENST00000621413 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
YTHDF3-212ENST00000621413 RB1CC1Q8TDY2 1594 aa28.15■■■□□ 2.1
YTHDF3-212ENST00000621413 NACADO15069 1562 aa28.13■■■□□ 2.09
YTHDF3-212ENST00000621413 MYO15BQ96JP2 1530 aa27.93■■■□□ 2.06
YTHDF3-212ENST00000621413 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
YTHDF3-212ENST00000621413 TTBK1Q5TCY1 1321 aaPredicted RBP27.62■■■□□ 2.01
YTHDF3-212ENST00000621413 UNC13AQ9UPW8 1703 aa27.54■■■□□ 2
YTHDF3-212ENST00000621413 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.99
YTHDF3-212ENST00000621413 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
YTHDF3-212ENST00000621413 SCAF1Q9H7N4 1312 aaKnown RBP27.37■■□□□ 1.97
YTHDF3-212ENST00000621413 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
YTHDF3-212ENST00000621413 PPARGC1BQ86YN6 1023 aaKnown RBP27.27■■□□□ 1.96
YTHDF3-212ENST00000621413 SHROOM4Q9ULL8 1493 aa26.98■■□□□ 1.91
YTHDF3-212ENST00000621413 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
YTHDF3-212ENST00000621413 PCGF6Q9BYE7 350 aa26.69■■□□□ 1.86
YTHDF3-212ENST00000621413 PRKCSHP14314 528 aaPredicted RBP26.63■■□□□ 1.85
YTHDF3-212ENST00000621413 EIF4G1Q04637 1599 aaKnown RBP26.6■■□□□ 1.85
YTHDF3-212ENST00000621413 BCL11AQ9H165 835 aa26.52■■□□□ 1.84
YTHDF3-212ENST00000621413 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
YTHDF3-212ENST00000621413 CECR2Q9BXF3 1484 aa26.4■■□□□ 1.82
YTHDF3-212ENST00000621413 ACIN1Q9UKV3 1341 aaKnown RBP26.32■■□□□ 1.8
YTHDF3-212ENST00000621413 FAM9AQ8IZU1 332 aaPredicted RBP26.24■■□□□ 1.79
YTHDF3-212ENST00000621413 SMARCA4P51532 1647 aa26.2■■□□□ 1.79
YTHDF3-212ENST00000621413 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
YTHDF3-212ENST00000621413 CENPBP07199 599 aaPredicted RBP26.16■■□□□ 1.78
YTHDF3-212ENST00000621413 ERICH6Q7L0X2 663 aa26.15■■□□□ 1.78
YTHDF3-212ENST00000621413 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
YTHDF3-212ENST00000621413 NEUROD1Q13562 356 aa26.09■■□□□ 1.77
YTHDF3-212ENST00000621413 GTF3C3Q9Y5Q9 886 aa26.07■■□□□ 1.76
YTHDF3-212ENST00000621413 ZEB1P37275 1124 aaPredicted RBP26.06■■□□□ 1.76
YTHDF3-212ENST00000621413 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
YTHDF3-212ENST00000621413 APLP2Q06481 763 aa26.04■■□□□ 1.76
YTHDF3-212ENST00000621413 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
YTHDF3-212ENST00000621413 NCAPD3P42695 1498 aa25.97■■□□□ 1.75
YTHDF3-212ENST00000621413 PEG3Q9GZU2 1588 aa25.88■■□□□ 1.73
YTHDF3-212ENST00000621413 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
YTHDF3-212ENST00000621413 WIZO95785 1651 aa25.84■■□□□ 1.73
YTHDF3-212ENST00000621413 RSF1Q96T23 1441 aaPredicted RBP25.84■■□□□ 1.73
YTHDF3-212ENST00000621413 HMGXB3Q12766 1538 aa25.83■■□□□ 1.73
YTHDF3-212ENST00000621413 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
YTHDF3-212ENST00000621413 ANP32EQ9BTT0 268 aa25.64■■□□□ 1.7
YTHDF3-212ENST00000621413 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
YTHDF3-212ENST00000621413 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
YTHDF3-212ENST00000621413 NESP48681 1621 aa25.43■■□□□ 1.66
YTHDF3-212ENST00000621413 CSRNP3Q8WYN3 585 aa25.31■■□□□ 1.64
YTHDF3-212ENST00000621413 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
YTHDF3-212ENST00000621413 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
YTHDF3-212ENST00000621413 CCDC88BA6NC98 1476 aa25.26■■□□□ 1.63
YTHDF3-212ENST00000621413 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
YTHDF3-212ENST00000621413 LAMC3Q9Y6N6 1575 aa25.25■■□□□ 1.63
YTHDF3-212ENST00000621413 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
YTHDF3-212ENST00000621413 CFTRP13569 1480 aa25.12■■□□□ 1.61
YTHDF3-212ENST00000621413 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
YTHDF3-212ENST00000621413 DIEXFQ68CQ4 756 aaKnown RBP25.03■■□□□ 1.6
YTHDF3-212ENST00000621413 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
YTHDF3-212ENST00000621413 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
YTHDF3-212ENST00000621413 THOC2Q8NI27 1593 aaKnown RBP24.91■■□□□ 1.58
YTHDF3-212ENST00000621413 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
YTHDF3-212ENST00000621413 SLC24A1O60721 1099 aa24.86■■□□□ 1.57
YTHDF3-212ENST00000621413 MRC2Q9UBG0 1479 aa24.86■■□□□ 1.57
YTHDF3-212ENST00000621413 CUX2O14529 1486 aa24.84■■□□□ 1.57
YTHDF3-212ENST00000621413 TSHZ2Q9NRE2 1034 aa24.84■■□□□ 1.57
YTHDF3-212ENST00000621413 WDR62O43379 1518 aa24.75■■□□□ 1.55
YTHDF3-212ENST00000621413 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
YTHDF3-212ENST00000621413 CLSPNQ9HAW4 1339 aa24.7■■□□□ 1.55
YTHDF3-212ENST00000621413 LOC105371045A0A1W2PR82 267 aa24.7■■□□□ 1.54
YTHDF3-212ENST00000621413 ANO8Q9HCE9 1232 aaPredicted RBP24.65■■□□□ 1.54
YTHDF3-212ENST00000621413 TOPBP1Q92547 1522 aa24.6■■□□□ 1.53
YTHDF3-212ENST00000621413 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
YTHDF3-212ENST00000621413 UBE2Q2Q8WVN8 375 aa24.58■■□□□ 1.53
YTHDF3-212ENST00000621413 DNMBPQ6XZF7 1577 aa24.55■■□□□ 1.52
YTHDF3-212ENST00000621413 YTHDC1Q96MU7 727 aaKnown RBP24.54■■□□□ 1.52
YTHDF3-212ENST00000621413 SUPT16HQ9Y5B9 1047 aaKnown RBP24.54■■□□□ 1.52
YTHDF3-212ENST00000621413 ABCC8Q09428 1581 aa24.52■■□□□ 1.52
YTHDF3-212ENST00000621413 CUX1P39880 1505 aa24.47■■□□□ 1.51
YTHDF3-212ENST00000621413 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
YTHDF3-212ENST00000621413 EIF5BO60841 1220 aaKnown RBP24.4■■□□□ 1.5
YTHDF3-212ENST00000621413 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
YTHDF3-212ENST00000621413 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
YTHDF3-212ENST00000621413 WRNQ14191 1432 aaPredicted RBP eCLIP24.36■■□□□ 1.49
YTHDF3-212ENST00000621413 RAD54L2Q9Y4B4 1467 aa24.35■■□□□ 1.49
YTHDF3-212ENST00000621413 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
YTHDF3-212ENST00000621413 DAXXQ9UER7 740 aaPredicted RBP24.32■■□□□ 1.48
YTHDF3-212ENST00000621413 SOGA1O94964 1423 aa24.32■■□□□ 1.48
YTHDF3-212ENST00000621413 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
YTHDF3-212ENST00000621413 TARBP1Q13395 1621 aaKnown RBP24.29■■□□□ 1.48
YTHDF3-212ENST00000621413 MYT1LQ9UL68 1186 aa24.27■■□□□ 1.48
YTHDF3-212ENST00000621413 ZNF316A6NFI3 1004 aaPredicted RBP24.26■■□□□ 1.47
YTHDF3-212ENST00000621413 CCER1Q8TC90 406 aaPredicted RBP24.25■■□□□ 1.47
YTHDF3-212ENST00000621413 TOP2BQ02880 1626 aa24.25■■□□□ 1.47
YTHDF3-212ENST00000621413 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.472e-8■■■■■ 95.2
YTHDF3-212ENST00000621413 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
YTHDF3-212ENST00000621413 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms