RNA–Protein interactions for RNA: ENST00000515467.2

SDHAP3-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

BASIC

Gene SDHAP3, Length 728 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-202ENST00000515467 NISCHQ9Y2I1 1504 aa38.3■■■■□ 3.72
SDHAP3-202ENST00000515467 CCDC180Q9P1Z9 1646 aa33.94■■■■□ 3.02
SDHAP3-202ENST00000515467 ABCC9O60706 1549 aa33.23■■■□□ 2.91
SDHAP3-202ENST00000515467 DCAF8L2P0C7V8 631 aa32.1■■■□□ 2.73
SDHAP3-202ENST00000515467 RB1CC1Q8TDY2 1594 aa32■■■□□ 2.71
SDHAP3-202ENST00000515467 NACADO15069 1562 aa31.99■■■□□ 2.71
SDHAP3-202ENST00000515467 ZCCHC6Q5VYS8 1495 aaKnown RBP31.88■■■□□ 2.69
SDHAP3-202ENST00000515467 MYO15BQ96JP2 1530 aa31.85■■■□□ 2.69
SDHAP3-202ENST00000515467 DCAF1Q9Y4B6 1507 aa31.72■■■□□ 2.67
SDHAP3-202ENST00000515467 PABPN1Q86U42 306 aaKnown RBP eCLIP31.13■■■□□ 2.57
SDHAP3-202ENST00000515467 UNC13AQ9UPW8 1703 aa31.07■■■□□ 2.56
SDHAP3-202ENST00000515467 DNAJC5BQ9UF47 199 aa30.98■■■□□ 2.55
SDHAP3-202ENST00000515467 SCRIBQ14160 1630 aa30.97■■■□□ 2.55
SDHAP3-202ENST00000515467 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
SDHAP3-202ENST00000515467 SHROOM4Q9ULL8 1493 aa30.76■■■□□ 2.51
SDHAP3-202ENST00000515467 EIF4G1Q04637 1599 aaKnown RBP30.16■■■□□ 2.42
SDHAP3-202ENST00000515467 CC2D2AQ9P2K1 1620 aa30.01■■■□□ 2.39
SDHAP3-202ENST00000515467 CECR2Q9BXF3 1484 aa29.88■■■□□ 2.37
SDHAP3-202ENST00000515467 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
SDHAP3-202ENST00000515467 SMARCA4P51532 1647 aa29.64■■■□□ 2.34
SDHAP3-202ENST00000515467 NCAPD3P42695 1498 aa29.56■■■□□ 2.32
SDHAP3-202ENST00000515467 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
SDHAP3-202ENST00000515467 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
SDHAP3-202ENST00000515467 MROH2BQ7Z745 1585 aa29.48■■■□□ 2.31
SDHAP3-202ENST00000515467 PEG3Q9GZU2 1588 aa29.39■■■□□ 2.29
SDHAP3-202ENST00000515467 HMGXB3Q12766 1538 aa29.35■■■□□ 2.29
SDHAP3-202ENST00000515467 BAZ1BQ9UIG0 1483 aaKnown RBP29.3■■■□□ 2.28
SDHAP3-202ENST00000515467 RSF1Q96T23 1441 aaPredicted RBP29.23■■■□□ 2.27
SDHAP3-202ENST00000515467 WIZO95785 1651 aa29.11■■■□□ 2.25
SDHAP3-202ENST00000515467 TOP2AP11388 1531 aaKnown RBP28.87■■■□□ 2.21
SDHAP3-202ENST00000515467 NESP48681 1621 aa28.73■■■□□ 2.19
SDHAP3-202ENST00000515467 CADPSQ9ULU8 1353 aa28.73■■■□□ 2.19
SDHAP3-202ENST00000515467 LAMC3Q9Y6N6 1575 aa28.71■■■□□ 2.19
SDHAP3-202ENST00000515467 ERCC6Q03468 1493 aa28.69■■■□□ 2.18
SDHAP3-202ENST00000515467 PDS5BQ9NTI5 1447 aa28.61■■■□□ 2.17
SDHAP3-202ENST00000515467 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
SDHAP3-202ENST00000515467 CCDC88BA6NC98 1476 aa28.58■■■□□ 2.17
SDHAP3-202ENST00000515467 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
SDHAP3-202ENST00000515467 CFTRP13569 1480 aa28.53■■■□□ 2.16
SDHAP3-202ENST00000515467 CUX2O14529 1486 aa28.36■■■□□ 2.13
SDHAP3-202ENST00000515467 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
SDHAP3-202ENST00000515467 KIF21AQ7Z4S6 1674 aa28.3■■■□□ 2.12
SDHAP3-202ENST00000515467 CEP164Q9UPV0 1460 aa28.3■■■□□ 2.12
SDHAP3-202ENST00000515467 MRC2Q9UBG0 1479 aa28.24■■■□□ 2.11
SDHAP3-202ENST00000515467 THOC2Q8NI27 1593 aaKnown RBP28.23■■■□□ 2.11
SDHAP3-202ENST00000515467 PRDM2Q13029 1718 aa28.12■■■□□ 2.09
SDHAP3-202ENST00000515467 WDR62O43379 1518 aa28.1■■■□□ 2.09
SDHAP3-202ENST00000515467 URB2Q14146 1524 aaKnown RBP28.02■■■□□ 2.08
SDHAP3-202ENST00000515467 ABCC8Q09428 1581 aa27.96■■■□□ 2.07
SDHAP3-202ENST00000515467 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
SDHAP3-202ENST00000515467 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
SDHAP3-202ENST00000515467 IFT140Q96RY7 1462 aa27.74■■■□□ 2.03
SDHAP3-202ENST00000515467 CUX1P39880 1505 aa27.66■■■□□ 2.02
SDHAP3-202ENST00000515467 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.01
SDHAP3-202ENST00000515467 SOGA1O94964 1423 aa27.6■■■□□ 2.01
SDHAP3-202ENST00000515467 WRNQ14191 1432 aaPredicted RBP eCLIP27.57■■■□□ 2
SDHAP3-202ENST00000515467 FGD5Q6ZNL6 1462 aa27.57■■■□□ 2
SDHAP3-202ENST00000515467 ZNF608Q9ULD9 1512 aaPredicted RBP27.53■■■□□ 2
SDHAP3-202ENST00000515467 RAD54L2Q9Y4B4 1467 aa27.51■■■□□ 2
SDHAP3-202ENST00000515467 TARBP1Q13395 1621 aaKnown RBP27.51■■□□□ 1.99
SDHAP3-202ENST00000515467 TRIM41Q8WV44 630 aa27.44■■□□□ 1.98
SDHAP3-202ENST00000515467 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.98
SDHAP3-202ENST00000515467 TOP2BQ02880 1626 aa27.43■■□□□ 1.98
SDHAP3-202ENST00000515467 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
SDHAP3-202ENST00000515467 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
SDHAP3-202ENST00000515467 SYNJ1O43426 1573 aa27.38■■□□□ 1.97
SDHAP3-202ENST00000515467 EIF4G3O43432 1585 aaKnown RBP27.36■■□□□ 1.97
SDHAP3-202ENST00000515467 WDR97A6NE52 1622 aa27.35■■□□□ 1.97
SDHAP3-202ENST00000515467 ABCA10Q8WWZ4 1543 aa27.34■■□□□ 1.97
SDHAP3-202ENST00000515467 OSCARQ8IYS5 282 aa27.31■■□□□ 1.96
SDHAP3-202ENST00000515467 GRIN2BQ13224 1484 aa27.25■■□□□ 1.95
SDHAP3-202ENST00000515467 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
SDHAP3-202ENST00000515467 FBLN2P98095 1184 aa27.18■■□□□ 1.94
SDHAP3-202ENST00000515467 MAGI1Q96QZ7 1491 aaPredicted RBP27.16■■□□□ 1.94
SDHAP3-202ENST00000515467 SNAPC4Q5SXM2 1469 aa27.15■■□□□ 1.94
SDHAP3-202ENST00000515467 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
SDHAP3-202ENST00000515467 ABCA5Q8WWZ7 1642 aa27.13■■□□□ 1.93
SDHAP3-202ENST00000515467 SYNJ2O15056 1496 aa27.05■■□□□ 1.92
SDHAP3-202ENST00000515467 KIF27Q86VH2 1401 aa27.03■■□□□ 1.92
SDHAP3-202ENST00000515467 PBRM1Q86U86 1689 aa27.02■■□□□ 1.92
SDHAP3-202ENST00000515467 ERICH3Q5RHP9 1530 aa27.01■■□□□ 1.91
SDHAP3-202ENST00000515467 FHAD1B1AJZ9 1412 aa26.97■■□□□ 1.91
SDHAP3-202ENST00000515467 CHD1O14646 1710 aa26.96■■□□□ 1.91
SDHAP3-202ENST00000515467 IGF1RP08069 1367 aa26.92■■□□□ 1.9
SDHAP3-202ENST00000515467 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
SDHAP3-202ENST00000515467 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
SDHAP3-202ENST00000515467 RIMBP3CA6NJZ7 1639 aa26.77■■□□□ 1.88
SDHAP3-202ENST00000515467 RIMBP3BA6NNM3 1639 aa26.77■■□□□ 1.88
SDHAP3-202ENST00000515467 RIMBP3Q9UFD9 1639 aa26.77■■□□□ 1.88
SDHAP3-202ENST00000515467 CARMIL1Q5VZK9 1371 aa26.77■■□□□ 1.88
SDHAP3-202ENST00000515467 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
SDHAP3-202ENST00000515467 NUP160Q12769 1436 aa26.75■■□□□ 1.87
SDHAP3-202ENST00000515467 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
SDHAP3-202ENST00000515467 CUL7Q14999 1698 aa26.72■■□□□ 1.87
SDHAP3-202ENST00000515467 ARHGEF11O15085 1522 aa26.7■■□□□ 1.87
SDHAP3-202ENST00000515467 RUSC2Q8N2Y8 1516 aa26.69■■□□□ 1.86
SDHAP3-202ENST00000515467 CEP170Q5SW79 1584 aa26.66■■□□□ 1.86
SDHAP3-202ENST00000515467 JPH4Q96JJ6 628 aa26.59■■□□□ 1.85
SDHAP3-202ENST00000515467 RAPGEF2Q9Y4G8 1499 aa26.58■■□□□ 1.85
SDHAP3-202ENST00000515467 CYB5RLQ6IPT4 315 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms