RNA–Protein interactions for RNA: ENST00000564051.2

AL109954.1-202, humanhuman

BASIC

Gene AL109954.1, Length 2,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109954.1-202ENST00000564051 NISCHQ9Y2I1 1504 aa33.37■■■□□ 2.93
AL109954.1-202ENST00000564051 CCDC180Q9P1Z9 1646 aa28.67■■■□□ 2.18
AL109954.1-202ENST00000564051 ZCCHC6Q5VYS8 1495 aaKnown RBP28.22■■■□□ 2.11
AL109954.1-202ENST00000564051 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
AL109954.1-202ENST00000564051 DCAF1Q9Y4B6 1507 aa27.56■■■□□ 2
AL109954.1-202ENST00000564051 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
AL109954.1-202ENST00000564051 SUPT5HO00267 1087 aaKnown RBP27.29■■□□□ 1.96
AL109954.1-202ENST00000564051 MYO15BQ96JP2 1530 aa26.89■■□□□ 1.89
AL109954.1-202ENST00000564051 ABCC9O60706 1549 aa26.6■■□□□ 1.85
AL109954.1-202ENST00000564051 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
AL109954.1-202ENST00000564051 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
AL109954.1-202ENST00000564051 NACADO15069 1562 aa26.49■■□□□ 1.83
AL109954.1-202ENST00000564051 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
AL109954.1-202ENST00000564051 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
AL109954.1-202ENST00000564051 CECR2Q9BXF3 1484 aa25.91■■□□□ 1.74
AL109954.1-202ENST00000564051 MROH2BQ7Z745 1585 aa25.85■■□□□ 1.73
AL109954.1-202ENST00000564051 WIZO95785 1651 aa25.71■■□□□ 1.71
AL109954.1-202ENST00000564051 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
AL109954.1-202ENST00000564051 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
AL109954.1-202ENST00000564051 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
AL109954.1-202ENST00000564051 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
AL109954.1-202ENST00000564051 SMARCA4P51532 1647 aa25.49■■□□□ 1.67
AL109954.1-202ENST00000564051 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
AL109954.1-202ENST00000564051 EIF4G1Q04637 1599 aaKnown RBP25.38■■□□□ 1.65
AL109954.1-202ENST00000564051 PCGF6Q9BYE7 350 aa25.37■■□□□ 1.65
AL109954.1-202ENST00000564051 HRCP23327 699 aa25.34■■□□□ 1.65
AL109954.1-202ENST00000564051 BICRAQ9NZM4 1560 aa25.31■■□□□ 1.64
AL109954.1-202ENST00000564051 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
AL109954.1-202ENST00000564051 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
AL109954.1-202ENST00000564051 FAM9AQ8IZU1 332 aaPredicted RBP25.16■■□□□ 1.62
AL109954.1-202ENST00000564051 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
AL109954.1-202ENST00000564051 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
AL109954.1-202ENST00000564051 PABPN1Q86U42 306 aaKnown RBP eCLIP25.09■■□□□ 1.61
AL109954.1-202ENST00000564051 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
AL109954.1-202ENST00000564051 ATAD2BQ9ULI0 1458 aa24.84■■□□□ 1.57
AL109954.1-202ENST00000564051 EHMT2Q96KQ7 1210 aa24.82■■□□□ 1.56
AL109954.1-202ENST00000564051 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
AL109954.1-202ENST00000564051 EEA1Q15075 1411 aa24.75■■□□□ 1.55
AL109954.1-202ENST00000564051 SOGA1O94964 1423 aa24.68■■□□□ 1.54
AL109954.1-202ENST00000564051 WRNQ14191 1432 aaPredicted RBP eCLIP24.67■■□□□ 1.54
AL109954.1-202ENST00000564051 PPARGC1BQ86YN6 1023 aaKnown RBP24.64■■□□□ 1.54
AL109954.1-202ENST00000564051 TNIKQ9UKE5 1360 aa24.56■■□□□ 1.52
AL109954.1-202ENST00000564051 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
AL109954.1-202ENST00000564051 CSRNP3Q8WYN3 585 aa24.56■■□□□ 1.52
AL109954.1-202ENST00000564051 RUSC2Q8N2Y8 1516 aa24.55■■□□□ 1.52
AL109954.1-202ENST00000564051 ZEB1P37275 1124 aaPredicted RBP24.54■■□□□ 1.52
AL109954.1-202ENST00000564051 CEP162Q5TB80 1403 aa24.52■■□□□ 1.52
AL109954.1-202ENST00000564051 HMGXB3Q12766 1538 aa24.5■■□□□ 1.51
AL109954.1-202ENST00000564051 GOLGA3Q08378 1498 aa24.48■■□□□ 1.51
AL109954.1-202ENST00000564051 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
AL109954.1-202ENST00000564051 KIF21BO75037 1637 aa24.41■■□□□ 1.5
AL109954.1-202ENST00000564051 CEP164Q9UPV0 1460 aa24.39■■□□□ 1.49
AL109954.1-202ENST00000564051 TOP2BQ02880 1626 aa24.37■■□□□ 1.49
AL109954.1-202ENST00000564051 UBTFP17480 764 aaKnown RBP24.35■■□□□ 1.49
AL109954.1-202ENST00000564051 BIVM-ERCC5R4GMW8 1640 aa24.33■■□□□ 1.49
AL109954.1-202ENST00000564051 CFTRP13569 1480 aa24.17■■□□□ 1.46
AL109954.1-202ENST00000564051 RAPGEF2Q9Y4G8 1499 aa24.13■■□□□ 1.45
AL109954.1-202ENST00000564051 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
AL109954.1-202ENST00000564051 CLIP1P30622 1438 aa24.13■■□□□ 1.45
AL109954.1-202ENST00000564051 CUX1P39880 1505 aa24.11■■□□□ 1.45
AL109954.1-202ENST00000564051 ERICH3Q5RHP9 1530 aa24.08■■□□□ 1.45
AL109954.1-202ENST00000564051 VPS8Q8N3P4 1428 aa24.04■■□□□ 1.44
AL109954.1-202ENST00000564051 PRXQ9BXM0 1461 aa24.02■■□□□ 1.44
AL109954.1-202ENST00000564051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
AL109954.1-202ENST00000564051 TTBK1Q5TCY1 1321 aaPredicted RBP24■■□□□ 1.43
AL109954.1-202ENST00000564051 CCER1Q8TC90 406 aaPredicted RBP23.99■■□□□ 1.43
AL109954.1-202ENST00000564051 KIF27Q86VH2 1401 aa23.96■■□□□ 1.43
AL109954.1-202ENST00000564051 CADPSQ9ULU8 1353 aa23.9■■□□□ 1.42
AL109954.1-202ENST00000564051 CC2D2AQ9P2K1 1620 aa23.9■■□□□ 1.42
AL109954.1-202ENST00000564051 APLP2Q06481 763 aa23.82■■□□□ 1.4
AL109954.1-202ENST00000564051 ARAP1Q96P48 1450 aa23.79■■□□□ 1.4
AL109954.1-202ENST00000564051 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
AL109954.1-202ENST00000564051 CUX2O14529 1486 aa23.72■■□□□ 1.39
AL109954.1-202ENST00000564051 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
AL109954.1-202ENST00000564051 IGF1RP08069 1367 aa23.67■■□□□ 1.38
AL109954.1-202ENST00000564051 FANCD2Q9BXW9 1451 aa23.67■■□□□ 1.38
AL109954.1-202ENST00000564051 ARHGAP35Q9NRY4 1499 aa23.62■■□□□ 1.37
AL109954.1-202ENST00000564051 HNRNPUL2Q1KMD3 747 aaKnown RBP23.6■■□□□ 1.37
AL109954.1-202ENST00000564051 DNMBPQ6XZF7 1577 aa23.6■■□□□ 1.37
AL109954.1-202ENST00000564051 CARMIL1Q5VZK9 1371 aa23.57■■□□□ 1.36
AL109954.1-202ENST00000564051 TOPBP1Q92547 1522 aa23.51■■□□□ 1.35
AL109954.1-202ENST00000564051 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
AL109954.1-202ENST00000564051 LAMC3Q9Y6N6 1575 aa23.49■■□□□ 1.35
AL109954.1-202ENST00000564051 KANK4Q5T7N3 995 aaPredicted RBP23.48■■□□□ 1.35
AL109954.1-202ENST00000564051 NESP48681 1621 aa23.47■■□□□ 1.35
AL109954.1-202ENST00000564051 RRBP1Q9P2E9 1410 aaKnown RBP23.47■■□□□ 1.35
AL109954.1-202ENST00000564051 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
AL109954.1-202ENST00000564051 MAP3K1Q13233 1512 aa23.44■■□□□ 1.34
AL109954.1-202ENST00000564051 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
AL109954.1-202ENST00000564051 CUL7Q14999 1698 aa23.41■■□□□ 1.34
AL109954.1-202ENST00000564051 DIEXFQ68CQ4 756 aaKnown RBP23.4■■□□□ 1.34
AL109954.1-202ENST00000564051 TIAM1Q13009 1591 aa23.38■■□□□ 1.33
AL109954.1-202ENST00000564051 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
AL109954.1-202ENST00000564051 ZNF316A6NFI3 1004 aaPredicted RBP23.35■■□□□ 1.33
AL109954.1-202ENST00000564051 CLSPNQ9HAW4 1339 aa23.34■■□□□ 1.33
AL109954.1-202ENST00000564051 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
AL109954.1-202ENST00000564051 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.33
AL109954.1-202ENST00000564051 CCNB3Q8WWL7 1395 aa23.32■■□□□ 1.32
AL109954.1-202ENST00000564051 CTTNBP2Q8WZ74 1663 aa23.3■■□□□ 1.32
AL109954.1-202ENST00000564051 EFCAB5A4FU69 1503 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms