RNA–Protein interactions for RNA: ENST00000319466.8

MCFD2-201, Transcript of multiple coagulation factor deficiency 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCFD2, Length 4,182 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-201ENST00000319466 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
MCFD2-201ENST00000319466 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
MCFD2-201ENST00000319466 DCAF8L2P0C7V8 631 aa27.4■■□□□ 1.98
MCFD2-201ENST00000319466 SUPT5HO00267 1087 aaKnown RBP27.28■■□□□ 1.96
MCFD2-201ENST00000319466 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
MCFD2-201ENST00000319466 CCDC180Q9P1Z9 1646 aa26.4■■□□□ 1.82
MCFD2-201ENST00000319466 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
MCFD2-201ENST00000319466 MYO15BQ96JP2 1530 aa25.67■■□□□ 1.7
MCFD2-201ENST00000319466 PCGF6Q9BYE7 350 aa25.59■■□□□ 1.69
MCFD2-201ENST00000319466 LOC105371045A0A1W2PR82 267 aa25.56■■□□□ 1.68
MCFD2-201ENST00000319466 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
MCFD2-201ENST00000319466 EHMT2Q96KQ7 1210 aa25.41■■□□□ 1.66
MCFD2-201ENST00000319466 ABCC9O60706 1549 aa25.36■■□□□ 1.65
MCFD2-201ENST00000319466 FAM9AQ8IZU1 332 aaPredicted RBP25.35■■□□□ 1.65
MCFD2-201ENST00000319466 SCRIBQ14160 1630 aa25.33■■□□□ 1.65
MCFD2-201ENST00000319466 TRIM41Q8WV44 630 aa25.25■■□□□ 1.63
MCFD2-201ENST00000319466 HRCP23327 699 aa25.2■■□□□ 1.62
MCFD2-201ENST00000319466 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
MCFD2-201ENST00000319466 PPARGC1BQ86YN6 1023 aaKnown RBP24.97■■□□□ 1.59
MCFD2-201ENST00000319466 TRIM26Q12899 539 aaPredicted RBP24.82■■□□□ 1.56
MCFD2-201ENST00000319466 CECR2Q9BXF3 1484 aa24.8■■□□□ 1.56
MCFD2-201ENST00000319466 RB1CC1Q8TDY2 1594 aa24.73■■□□□ 1.55
MCFD2-201ENST00000319466 NACADO15069 1562 aa24.68■■□□□ 1.54
MCFD2-201ENST00000319466 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
MCFD2-201ENST00000319466 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
MCFD2-201ENST00000319466 TTBK1Q5TCY1 1321 aaPredicted RBP24.53■■□□□ 1.52
MCFD2-201ENST00000319466 WIZO95785 1651 aa24.41■■□□□ 1.5
MCFD2-201ENST00000319466 ZEB1P37275 1124 aaPredicted RBP24.24■■□□□ 1.47
MCFD2-201ENST00000319466 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
MCFD2-201ENST00000319466 BAZ1AQ9NRL2 1556 aaPredicted RBP24.21■■□□□ 1.47
MCFD2-201ENST00000319466 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
MCFD2-201ENST00000319466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.1■■□□□ 1.45
MCFD2-201ENST00000319466 RANGAP1P46060 587 aaPredicted RBP24.09■■□□□ 1.45
MCFD2-201ENST00000319466 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
MCFD2-201ENST00000319466 CCDC88BA6NC98 1476 aa24.04■■□□□ 1.44
MCFD2-201ENST00000319466 CSRNP3Q8WYN3 585 aa23.95■■□□□ 1.42
MCFD2-201ENST00000319466 SMARCA4P51532 1647 aa23.93■■□□□ 1.42
MCFD2-201ENST00000319466 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
MCFD2-201ENST00000319466 SOGA1O94964 1423 aa23.91■■□□□ 1.42
MCFD2-201ENST00000319466 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
MCFD2-201ENST00000319466 CEP162Q5TB80 1403 aa23.77■■□□□ 1.4
MCFD2-201ENST00000319466 APLP2Q06481 763 aa23.75■■□□□ 1.39
MCFD2-201ENST00000319466 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
MCFD2-201ENST00000319466 WRNQ14191 1432 aaPredicted RBP eCLIP23.69■■□□□ 1.38
MCFD2-201ENST00000319466 HNRNPUL2Q1KMD3 747 aaKnown RBP23.69■■□□□ 1.38
MCFD2-201ENST00000319466 UNC13AQ9UPW8 1703 aa23.68■■□□□ 1.38
MCFD2-201ENST00000319466 TNIKQ9UKE5 1360 aa23.63■■□□□ 1.37
MCFD2-201ENST00000319466 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
MCFD2-201ENST00000319466 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.36
MCFD2-201ENST00000319466 BICRAQ9NZM4 1560 aa23.56■■□□□ 1.36
MCFD2-201ENST00000319466 EEA1Q15075 1411 aa23.55■■□□□ 1.36
MCFD2-201ENST00000319466 GOLGA3Q08378 1498 aa23.52■■□□□ 1.36
MCFD2-201ENST00000319466 ATAD2BQ9ULI0 1458 aa23.49■■□□□ 1.35
MCFD2-201ENST00000319466 DIEXFQ68CQ4 756 aaKnown RBP23.44■■□□□ 1.34
MCFD2-201ENST00000319466 CLIP1P30622 1438 aa23.41■■□□□ 1.34
MCFD2-201ENST00000319466 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
MCFD2-201ENST00000319466 SYNJ1O43426 1573 aa23.32■■□□□ 1.32
MCFD2-201ENST00000319466 RAPGEF2Q9Y4G8 1499 aa23.26■■□□□ 1.31
MCFD2-201ENST00000319466 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
MCFD2-201ENST00000319466 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
MCFD2-201ENST00000319466 ITGAEP38570 1179 aa23.25■■□□□ 1.31
MCFD2-201ENST00000319466 ATP1B4Q9UN42 357 aaPredicted RBP23.19■■□□□ 1.3
MCFD2-201ENST00000319466 PEG3Q9GZU2 1588 aa23.19■■□□□ 1.3
MCFD2-201ENST00000319466 CENPBP07199 599 aaPredicted RBP23.18■■□□□ 1.3
MCFD2-201ENST00000319466 ZNF316A6NFI3 1004 aaPredicted RBP23.17■■□□□ 1.3
MCFD2-201ENST00000319466 VPS8Q8N3P4 1428 aa23.14■■□□□ 1.29
MCFD2-201ENST00000319466 NEUROD1Q13562 356 aa23.11■■□□□ 1.29
MCFD2-201ENST00000319466 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
MCFD2-201ENST00000319466 KANK4Q5T7N3 995 aaPredicted RBP23.03■■□□□ 1.28
MCFD2-201ENST00000319466 P3H3Q8IVL6 736 aa23.01■■□□□ 1.27
MCFD2-201ENST00000319466 KIF21BO75037 1637 aa23.01■■□□□ 1.27
MCFD2-201ENST00000319466 KIF27Q86VH2 1401 aa23■■□□□ 1.27
MCFD2-201ENST00000319466 GTF3C3Q9Y5Q9 886 aa22.99■■□□□ 1.27
MCFD2-201ENST00000319466 NCAPD3P42695 1498 aa22.95■■□□□ 1.26
MCFD2-201ENST00000319466 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
MCFD2-201ENST00000319466 MIER1Q8N108 512 aa22.9■■□□□ 1.26
MCFD2-201ENST00000319466 CUX1P39880 1505 aa22.85■■□□□ 1.25
MCFD2-201ENST00000319466 CUX2O14529 1486 aa22.85■■□□□ 1.25
MCFD2-201ENST00000319466 FAM50AQ14320 339 aaKnown RBP22.84■■□□□ 1.25
MCFD2-201ENST00000319466 PRXQ9BXM0 1461 aa22.81■■□□□ 1.24
MCFD2-201ENST00000319466 CFTRP13569 1480 aa22.78■■□□□ 1.24
MCFD2-201ENST00000319466 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
MCFD2-201ENST00000319466 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
MCFD2-201ENST00000319466 CADPSQ9ULU8 1353 aa22.75■■□□□ 1.23
MCFD2-201ENST00000319466 CARMIL1Q5VZK9 1371 aa22.73■■□□□ 1.23
MCFD2-201ENST00000319466 IGF1RP08069 1367 aa22.69■■□□□ 1.22
MCFD2-201ENST00000319466 ERICH3Q5RHP9 1530 aa22.69■■□□□ 1.22
MCFD2-201ENST00000319466 BIVM-ERCC5R4GMW8 1640 aa22.69■■□□□ 1.22
MCFD2-201ENST00000319466 CCNB3Q8WWL7 1395 aa22.67■■□□□ 1.22
MCFD2-201ENST00000319466 PELP1Q8IZL8 1130 aaKnown RBP22.65■■□□□ 1.22
MCFD2-201ENST00000319466 DHX57Q6P158 1386 aaKnown RBP22.64■■□□□ 1.21
MCFD2-201ENST00000319466 ARHGAP35Q9NRY4 1499 aa22.62■■□□□ 1.21
MCFD2-201ENST00000319466 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
MCFD2-201ENST00000319466 CLSPNQ9HAW4 1339 aa22.52■■□□□ 1.2
MCFD2-201ENST00000319466 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
MCFD2-201ENST00000319466 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
MCFD2-201ENST00000319466 SIN3AQ96ST3 1273 aa22.49■■□□□ 1.19
MCFD2-201ENST00000319466 RAB3GAP2Q9H2M9 1393 aa22.48■■□□□ 1.19
MCFD2-201ENST00000319466 ARID3CA6NKF2 412 aa22.47■■□□□ 1.19
MCFD2-201ENST00000319466 FHOD3Q2V2M9 1422 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms