Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
EXD3Q8N9H8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22■■□□□ 1.11
EXD3Q8N9H8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22■■□□□ 1.11
EXD3Q8N9H8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22■■□□□ 1.11
EXD3Q8N9H8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22■■□□□ 1.11
EXD3Q8N9H8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22■■□□□ 1.11
EXD3Q8N9H8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
EXD3Q8N9H8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
EXD3Q8N9H8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.99■■□□□ 1.11
EXD3Q8N9H8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.99■■□□□ 1.11
EXD3Q8N9H8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.99■■□□□ 1.11
EXD3Q8N9H8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
EXD3Q8N9H8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
EXD3Q8N9H8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
EXD3Q8N9H8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
EXD3Q8N9H8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
EXD3Q8N9H8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.98■■□□□ 1.11
EXD3Q8N9H8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
EXD3Q8N9H8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.98■■□□□ 1.11
EXD3Q8N9H8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
EXD3Q8N9H8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.98■■□□□ 1.11
EXD3Q8N9H8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
EXD3Q8N9H8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
EXD3Q8N9H8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
EXD3Q8N9H8 SUDS3P1-201ENST00000505831 966 ntBASIC21.97■■□□□ 1.11
EXD3Q8N9H8 AL031432.3-201ENST00000607698 485 ntBASIC21.97■■□□□ 1.11
EXD3Q8N9H8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
EXD3Q8N9H8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
EXD3Q8N9H8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
EXD3Q8N9H8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
EXD3Q8N9H8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.97■■□□□ 1.11
EXD3Q8N9H8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
EXD3Q8N9H8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
EXD3Q8N9H8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
EXD3Q8N9H8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
EXD3Q8N9H8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.96■■□□□ 1.11
EXD3Q8N9H8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.96■■□□□ 1.11
EXD3Q8N9H8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.96■■□□□ 1.11
EXD3Q8N9H8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.96■■□□□ 1.11
EXD3Q8N9H8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
EXD3Q8N9H8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
EXD3Q8N9H8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.95■■□□□ 1.1
EXD3Q8N9H8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EXD3Q8N9H8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.95■■□□□ 1.1
EXD3Q8N9H8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.95■■□□□ 1.1
EXD3Q8N9H8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EXD3Q8N9H8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EXD3Q8N9H8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EXD3Q8N9H8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EXD3Q8N9H8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EXD3Q8N9H8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EXD3Q8N9H8 UNC93B3-201ENST00000308076 687 ntBASIC21.93■■□□□ 1.1
EXD3Q8N9H8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EXD3Q8N9H8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.93■■□□□ 1.1
EXD3Q8N9H8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.93■■□□□ 1.1
EXD3Q8N9H8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EXD3Q8N9H8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EXD3Q8N9H8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EXD3Q8N9H8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.93■■□□□ 1.1
EXD3Q8N9H8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EXD3Q8N9H8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.93■■□□□ 1.1
EXD3Q8N9H8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.93■■□□□ 1.1
EXD3Q8N9H8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
EXD3Q8N9H8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
EXD3Q8N9H8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
EXD3Q8N9H8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EXD3Q8N9H8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.92■■□□□ 1.1
EXD3Q8N9H8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.92■■□□□ 1.1
EXD3Q8N9H8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EXD3Q8N9H8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.91■■□□□ 1.1
EXD3Q8N9H8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.91■■□□□ 1.1
EXD3Q8N9H8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.91■■□□□ 1.1
EXD3Q8N9H8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
EXD3Q8N9H8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
EXD3Q8N9H8 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.91■■□□□ 1.1
EXD3Q8N9H8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.91■■□□□ 1.1
EXD3Q8N9H8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EXD3Q8N9H8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
EXD3Q8N9H8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
EXD3Q8N9H8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EXD3Q8N9H8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms