RNA–Protein interactions for RNA: ENST00000410022.6

NFU1-203, Transcript of NFU1 iron-sulfur cluster scaffold, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFU1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFU1-203ENST00000410022 NISCHQ9Y2I1 1504 aa56.58■■■■■ 6.65
NFU1-203ENST00000410022 CCDC180Q9P1Z9 1646 aa50.26■■■■■ 5.64
NFU1-203ENST00000410022 ABCC9O60706 1549 aa48.59■■■■■ 5.37
NFU1-203ENST00000410022 ZCCHC6Q5VYS8 1495 aaKnown RBP47.24■■■■■ 5.15
NFU1-203ENST00000410022 NACADO15069 1562 aa47.11■■■■■ 5.13
NFU1-203ENST00000410022 RB1CC1Q8TDY2 1594 aa47.06■■■■■ 5.12
NFU1-203ENST00000410022 MYO15BQ96JP2 1530 aa47■■■■■ 5.11
NFU1-203ENST00000410022 DCAF8L2P0C7V8 631 aa46.96■■■■■ 5.11
NFU1-203ENST00000410022 DCAF1Q9Y4B6 1507 aa46.92■■■■■ 5.1
NFU1-203ENST00000410022 UNC13AQ9UPW8 1703 aa46.01■■■■■ 4.96
NFU1-203ENST00000410022 SCRIBQ14160 1630 aa45.75■■■■■ 4.91
NFU1-203ENST00000410022 BICRAQ9NZM4 1560 aa45.54■■■■■ 4.88
NFU1-203ENST00000410022 PABPN1Q86U42 306 aaKnown RBP eCLIP45.4■■■■■ 4.86
NFU1-203ENST00000410022 SHROOM4Q9ULL8 1493 aa45.26■■■■■ 4.84
NFU1-203ENST00000410022 EIF4G1Q04637 1599 aaKnown RBP44.34■■■■■ 4.69
NFU1-203ENST00000410022 DNAJC5BQ9UF47 199 aa44.12■■■■■ 4.65
NFU1-203ENST00000410022 CC2D2AQ9P2K1 1620 aa44.05■■■■■ 4.64
NFU1-203ENST00000410022 CECR2Q9BXF3 1484 aa43.94■■■■■ 4.62
NFU1-203ENST00000410022 BAZ1AQ9NRL2 1556 aaPredicted RBP43.88■■■■■ 4.62
NFU1-203ENST00000410022 SMARCA4P51532 1647 aa43.85■■■■■ 4.61
NFU1-203ENST00000410022 MROH2BQ7Z745 1585 aa43.56■■■■■ 4.56
NFU1-203ENST00000410022 SMARCA2P51531 1590 aa43.52■■■■■ 4.56
NFU1-203ENST00000410022 ATAD2BQ9ULI0 1458 aa43.46■■■■■ 4.55
NFU1-203ENST00000410022 PEG3Q9GZU2 1588 aa43.46■■■■■ 4.55
NFU1-203ENST00000410022 NCAPD3P42695 1498 aa43.4■■■■■ 4.54
NFU1-203ENST00000410022 HMGXB3Q12766 1538 aa43.29■■■■■ 4.52
NFU1-203ENST00000410022 RSF1Q96T23 1441 aaPredicted RBP43.21■■■■■ 4.51
NFU1-203ENST00000410022 BAZ1BQ9UIG0 1483 aaKnown RBP43.16■■■■■ 4.5
NFU1-203ENST00000410022 WIZO95785 1651 aa43.14■■■■■ 4.5
NFU1-203ENST00000410022 TOP2AP11388 1531 aaKnown RBP42.76■■■■■ 4.44
NFU1-203ENST00000410022 SUPT5HO00267 1087 aaKnown RBP42.32■■■■■ 4.37
NFU1-203ENST00000410022 LAMC3Q9Y6N6 1575 aa42.27■■■■■ 4.36
NFU1-203ENST00000410022 CCDC88BA6NC98 1476 aa42.18■■■■■ 4.34
NFU1-203ENST00000410022 NESP48681 1621 aa42.15■■■■■ 4.34
NFU1-203ENST00000410022 CADPSQ9ULU8 1353 aa42.14■■■■■ 4.34
NFU1-203ENST00000410022 CFTRP13569 1480 aa41.99■■■■■ 4.31
NFU1-203ENST00000410022 PDS5BQ9NTI5 1447 aa41.93■■■■■ 4.3
NFU1-203ENST00000410022 ERCC6Q03468 1493 aa41.93■■■■■ 4.3
NFU1-203ENST00000410022 PRDM2Q13029 1718 aa41.87■■■■■ 4.29
NFU1-203ENST00000410022 KIF21AQ7Z4S6 1674 aa41.78■■■■■ 4.28
NFU1-203ENST00000410022 FANCD2Q9BXW9 1451 aa41.66■■■■■ 4.26
NFU1-203ENST00000410022 CEP164Q9UPV0 1460 aa41.61■■■■■ 4.25
NFU1-203ENST00000410022 THOC2Q8NI27 1593 aaKnown RBP41.54■■■■■ 4.24
NFU1-203ENST00000410022 MRC2Q9UBG0 1479 aa41.45■■■■■ 4.23
NFU1-203ENST00000410022 CUX2O14529 1486 aa41.39■■■■■ 4.22
NFU1-203ENST00000410022 WDR62O43379 1518 aa41.32■■■■■ 4.21
NFU1-203ENST00000410022 URB2Q14146 1524 aaKnown RBP41.19■■■■■ 4.19
NFU1-203ENST00000410022 ABCC8Q09428 1581 aa41.15■■■■■ 4.18
NFU1-203ENST00000410022 DNMBPQ6XZF7 1577 aa41.08■■■■■ 4.17
NFU1-203ENST00000410022 TOPBP1Q92547 1522 aa41.04■■■■■ 4.16
NFU1-203ENST00000410022 CUX1P39880 1505 aa40.87■■■■■ 4.13
NFU1-203ENST00000410022 WRNQ14191 1432 aaPredicted RBP eCLIP40.77■■■■■ 4.12
NFU1-203ENST00000410022 POLA1P09884 1462 aaPredicted RBP40.71■■■■■ 4.11
NFU1-203ENST00000410022 IFT140Q96RY7 1462 aa40.71■■■■■ 4.11
NFU1-203ENST00000410022 BIVM-ERCC5R4GMW8 1640 aa40.7■■■■■ 4.11
NFU1-203ENST00000410022 TOP2BQ02880 1626 aa40.69■■■■■ 4.1
NFU1-203ENST00000410022 FGD5Q6ZNL6 1462 aa40.67■■■■■ 4.1
NFU1-203ENST00000410022 SYNJ1O43426 1573 aa40.63■■■■■ 4.1
NFU1-203ENST00000410022 TARBP1Q13395 1621 aaKnown RBP40.59■■■■■ 4.09
NFU1-203ENST00000410022 SOGA1O94964 1423 aa40.53■■■■■ 4.08
NFU1-203ENST00000410022 RAD54L2Q9Y4B4 1467 aa40.47■■■■■ 4.07
NFU1-203ENST00000410022 WDR97A6NE52 1622 aa40.42■■■■■ 4.06
NFU1-203ENST00000410022 ZNF608Q9ULD9 1512 aaPredicted RBP40.41■■■■■ 4.06
NFU1-203ENST00000410022 EIF4G3O43432 1585 aaKnown RBP40.37■■■■■ 4.05
NFU1-203ENST00000410022 ABCA10Q8WWZ4 1543 aa40.33■■■■■ 4.05
NFU1-203ENST00000410022 AQRO60306 1485 aaKnown RBP eCLIP40.23■■■■■ 4.03
NFU1-203ENST00000410022 TDRD9Q8NDG6 1382 aaKnown RBP40.21■■■■■ 4.03
NFU1-203ENST00000410022 ABCA5Q8WWZ7 1642 aa40.16■■■■■ 4.02
NFU1-203ENST00000410022 GAPVD1Q14C86 1478 aa40.11■■■■■ 4.01
NFU1-203ENST00000410022 PBRM1Q86U86 1689 aa40.07■■■■■ 4.01
NFU1-203ENST00000410022 GRIN2BQ13224 1484 aa40.06■■■■■ 4
NFU1-203ENST00000410022 TRIM41Q8WV44 630 aa40.03■■■■■ 4
NFU1-203ENST00000410022 MAGI1Q96QZ7 1491 aaPredicted RBP39.95■■■■□ 3.99
NFU1-203ENST00000410022 SNAPC4Q5SXM2 1469 aa39.92■■■■□ 3.98
NFU1-203ENST00000410022 KIF27Q86VH2 1401 aa39.91■■■■□ 3.98
NFU1-203ENST00000410022 ERICH3Q5RHP9 1530 aa39.89■■■■□ 3.98
NFU1-203ENST00000410022 CHD1O14646 1710 aa39.8■■■■□ 3.96
NFU1-203ENST00000410022 SYNJ2O15056 1496 aa39.77■■■■□ 3.96
NFU1-203ENST00000410022 ADAMTS12P58397 1594 aa39.75■■■■□ 3.95
NFU1-203ENST00000410022 CHIC1Q5VXU3 224 aa39.75■■■■□ 3.95
NFU1-203ENST00000410022 FHAD1B1AJZ9 1412 aa39.67■■■■□ 3.94
NFU1-203ENST00000410022 OSCARQ8IYS5 282 aa39.66■■■■□ 3.94
NFU1-203ENST00000410022 FBLN2P98095 1184 aa39.65■■■■□ 3.94
NFU1-203ENST00000410022 CHMP7Q8WUX9 453 aaPredicted RBP39.65■■■■□ 3.94
NFU1-203ENST00000410022 CUL7Q14999 1698 aa39.65■■■■□ 3.94
NFU1-203ENST00000410022 IGF1RP08069 1367 aa39.62■■■■□ 3.93
NFU1-203ENST00000410022 GRIN2AQ12879 1464 aa39.54■■■■□ 3.92
NFU1-203ENST00000410022 RUSC2Q8N2Y8 1516 aa39.54■■■■□ 3.92
NFU1-203ENST00000410022 DNAJC5Q9H3Z4 198 aa39.54■■■■□ 3.92
NFU1-203ENST00000410022 EEA1Q15075 1411 aa39.46■■■■□ 3.91
NFU1-203ENST00000410022 CARMIL1Q5VZK9 1371 aa39.43■■■■□ 3.9
NFU1-203ENST00000410022 CLASP1Q7Z460 1538 aa39.35■■■■□ 3.89
NFU1-203ENST00000410022 NUP160Q12769 1436 aa39.34■■■■□ 3.89
NFU1-203ENST00000410022 CEP170Q5SW79 1584 aa39.31■■■■□ 3.88
NFU1-203ENST00000410022 RAPGEF2Q9Y4G8 1499 aa39.27■■■■□ 3.88
NFU1-203ENST00000410022 CSRNP3Q8WYN3 585 aa39.23■■■■□ 3.87
NFU1-203ENST00000410022 PRXQ9BXM0 1461 aa39.21■■■■□ 3.87
NFU1-203ENST00000410022 FAM9AQ8IZU1 332 aaPredicted RBP39.08■■■■□ 3.85
NFU1-203ENST00000410022 KIAA0586Q9BVV6 1533 aa39.08■■■■□ 3.85
NFU1-203ENST00000410022 SHROOM2Q13796 1616 aa39.05■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms