Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 HNRNPM-206ENST00000596984 664 ntTSL 517.49■□□□□ 0.393e-10■■■■□ 22.2
SRSF1Q07955 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.383e-6■■■■□ 22.2
SRSF1Q07955 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.04■□□□□ 0.323e-6■■■■□ 22.2
SRSF1Q07955 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.91■□□□□ 0.33e-6■■■■□ 22.2
SRSF1Q07955 NBEAL2-206ENST00000461036 785 ntTSL 316.53■□□□□ 0.243e-6■■■■□ 22.2
SRSF1Q07955 PTPN23-204ENST00000477276 882 ntTSL 516.21■□□□□ 0.193e-6■■■■□ 22.2
SRSF1Q07955 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.13e-6■■■■□ 22.2
SRSF1Q07955 ZNF692-210ENST00000476503 1006 ntAPPRIS ALT2 TSL 315.62■□□□□ 0.093e-6■■■■□ 22.2
SRSF1Q07955 AC020915.1-203ENST00000610038 669 ntAPPRIS P5 TSL 515.55■□□□□ 0.083e-6■■■■□ 22.2
SRSF1Q07955 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.073e-6■■■■□ 22.2
SRSF1Q07955 NBEAL2-210ENST00000477412 827 ntTSL 215.31■□□□□ 0.043e-6■■■■□ 22.2
SRSF1Q07955 NBEAL2-209ENST00000476095 959 ntTSL 515.31■□□□□ 0.043e-6■■■■□ 22.2
SRSF1Q07955 ATG2A-204ENST00000461701 2031 ntTSL 215.11■□□□□ 0.013e-6■■■■□ 22.2
SRSF1Q07955 IDUA-212ENST00000514698 2185 ntTSL 515.08■□□□□ 03e-6■■■■□ 22.2
SRSF1Q07955 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.073e-6■■■■□ 22.2
SRSF1Q07955 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.093e-6■■■■□ 22.2
SRSF1Q07955 AC020915.1-206ENST00000609864 536 ntAPPRIS ALT2 TSL 514.11□□□□□ -0.153e-6■■■■□ 22.2
SRSF1Q07955 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.02□□□□□ -0.173e-6■■■■□ 22.2
SRSF1Q07955 AC020915.1-205ENST00000608070 564 ntAPPRIS ALT2 TSL 513.99□□□□□ -0.173e-6■■■■□ 22.2
SRSF1Q07955 RNF4-210ENST00000508235 603 ntTSL 313.59□□□□□ -0.233e-6■■■■□ 22.2
SRSF1Q07955 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.323e-6■■■■□ 22.2
SRSF1Q07955 DDX42-219ENST00000584951 591 ntTSL 212.9□□□□□ -0.343e-6■■■■□ 22.2
SRSF1Q07955 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.67□□□□□ -0.383e-6■■■■□ 22.2
SRSF1Q07955 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.393e-6■■■■□ 22.2
SRSF1Q07955 FHOD1-209ENST00000569085 735 ntTSL 212.29□□□□□ -0.443e-6■■■■□ 22.2
SRSF1Q07955 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.25□□□□□ -0.453e-6■■■■□ 22.2
SRSF1Q07955 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.98□□□□□ -0.491e-9■■■■□ 22.2
SRSF1Q07955 AGO3-207ENST00000634486 3599 ntTSL 511.66□□□□□ -0.543e-6■■■■□ 22.2
SRSF1Q07955 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.543e-6■■■■□ 22.2
SRSF1Q07955 UBR1-212ENST00000627960 189 ntTSL 5 BASIC11.58□□□□□ -0.563e-6■■■■□ 22.2
SRSF1Q07955 NBEAL2-202ENST00000423436 765 ntTSL 311.58□□□□□ -0.563e-6■■■■□ 22.2
SRSF1Q07955 HNRNPM-215ENST00000601645 832 ntTSL 311.5□□□□□ -0.573e-10■■■■□ 22.2
SRSF1Q07955 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.593e-6■■■■□ 22.2
SRSF1Q07955 MAF1-202ENST00000527058 868 ntTSL 311.38□□□□□ -0.593e-6■■■■□ 22.2
SRSF1Q07955 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.61e-9■■■■□ 22.2
SRSF1Q07955 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.19□□□□□ -0.623e-6■■■■□ 22.2
SRSF1Q07955 HNRNPM-210ENST00000598367 298 ntTSL 511.18□□□□□ -0.623e-6■■■■□ 22.2
SRSF1Q07955 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.98□□□□□ -0.653e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-216ENST00000579535 567 ntTSL 510.84□□□□□ -0.673e-6■■■■□ 22.2
SRSF1Q07955 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.683e-6■■■■□ 22.2
SRSF1Q07955 AGO3-206ENST00000491443 548 ntTSL 210.67□□□□□ -0.73e-6■■■■□ 22.2
SRSF1Q07955 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.793e-6■■■■□ 22.2
SRSF1Q07955 NUDCD3-210ENST00000493613 613 ntTSL 310.07□□□□□ -0.83e-6■■■■□ 22.2
SRSF1Q07955 PTPN23-206ENST00000602307 5119 ntTSL 29.86□□□□□ -0.833e-6■■■■□ 22.2
SRSF1Q07955 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.853e-6■■■■□ 22.2
SRSF1Q07955 NUDCD3-205ENST00000472246 570 ntTSL 49.61□□□□□ -0.873e-6■■■■□ 22.2
SRSF1Q07955 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.883e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-217ENST00000579630 550 ntTSL 49.44□□□□□ -0.93e-6■■■■□ 22.2
SRSF1Q07955 AC020915.1-207ENST00000608004 501 ntAPPRIS ALT2 TSL 59.4□□□□□ -0.93e-6■■■■□ 22.2
SRSF1Q07955 AP000873.2-208ENST00000500634 876 ntTSL 1 (best) BASIC9.25□□□□□ -0.933e-6■■■■□ 22.2
SRSF1Q07955 HDAC1-202ENST00000428704 664 ntTSL 29.09□□□□□ -0.953e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-225ENST00000584142 565 ntTSL 48.79□□□□□ -13e-6■■■■□ 22.2
SRSF1Q07955 ZNF692-209ENST00000474351 867 ntTSL 28.77□□□□□ -1.013e-6■■■■□ 22.2
SRSF1Q07955 UBR1-210ENST00000569337 549 ntTSL 58.73□□□□□ -1.013e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-221ENST00000581200 486 ntTSL 48.64□□□□□ -1.033e-6■■■■□ 22.2
SRSF1Q07955 LSG1-203ENST00000437613 854 ntTSL 58.58□□□□□ -1.043e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-224ENST00000582708 521 ntTSL 58.56□□□□□ -1.043e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-206ENST00000473659 559 ntTSL 38.45□□□□□ -1.063e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-222ENST00000581224 815 ntTSL 38.24□□□□□ -1.093e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-218ENST00000579843 459 ntTSL 48.17□□□□□ -1.13e-6■■■■□ 22.2
SRSF1Q07955 NUDCD3-204ENST00000464812 811 ntTSL 58.12□□□□□ -1.113e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-205ENST00000473540 760 ntTSL 58.07□□□□□ -1.123e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-215ENST00000579272 568 ntTSL 47.89□□□□□ -1.153e-6■■■■□ 22.2
SRSF1Q07955 UBR1-204ENST00000563239 545 ntTSL 37.88□□□□□ -1.153e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-220ENST00000580388 516 ntTSL 57.87□□□□□ -1.153e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-203ENST00000460728 793 ntTSL 57.87□□□□□ -1.153e-6■■■■□ 22.2
SRSF1Q07955 DYRK1A-204ENST00000398960 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.153e-6■■■■□ 22.2
SRSF1Q07955 LSG1-201ENST00000265245 3572 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.163e-6■■■■□ 22.2
SRSF1Q07955 NUDCD3-203ENST00000460110 3641 ntTSL 1 (best)7.37□□□□□ -1.233e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC6.98□□□□□ -1.293e-6■■■■□ 22.2
SRSF1Q07955 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.97□□□□□ -1.293e-6■■■■□ 22.2
SRSF1Q07955 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.9□□□□□ -1.33e-6■■■■□ 22.2
SRSF1Q07955 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.66□□□□□ -1.343e-6■■■■□ 22.2
SRSF1Q07955 DDX42-207ENST00000578593 2919 ntTSL 26.49□□□□□ -1.373e-6■■■■□ 22.2
SRSF1Q07955 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.25□□□□□ -1.413e-6■■■■□ 22.2
SRSF1Q07955 LSG1-205ENST00000461343 428 ntTSL 26.05□□□□□ -1.443e-6■■■■□ 22.2
SRSF1Q07955 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.443e-6■■■■□ 22.2
SRSF1Q07955 DDX42-217ENST00000584010 3929 ntTSL 25.97□□□□□ -1.453e-6■■■■□ 22.2
SRSF1Q07955 AC020915.1-208ENST00000590505 3889 ntTSL 25.91□□□□□ -1.463e-6■■■■□ 22.2
SRSF1Q07955 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.12□□□□□ -1.593e-6■■■■□ 22.2
SRSF1Q07955 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.43□□□□□ -1.73e-6■■■■□ 22.2
SRSF1Q07955 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.743e-6■■■■□ 22.2
SRSF1Q07955 CRLS1-207ENST00000609154 977 ntTSL 1 (best)4.19□□□□□ -1.743e-6■■■■□ 22.2
SRSF1Q07955 CRLS1-206ENST00000489345 644 ntTSL 54.11□□□□□ -1.753e-6■■■■□ 22.2
SRSF1Q07955 HNRNPM-203ENST00000593293 764 ntTSL 34.08□□□□□ -1.763e-6■■■■□ 22.2
SRSF1Q07955 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.96□□□□□ -1.783e-6■■■■□ 22.2
SRSF1Q07955 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.813e-6■■■■□ 22.2
SRSF1Q07955 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.81□□□□□ -1.963e-6■■■■□ 22.2
SRSF1Q07955 FDPS-205ENST00000465559 677 ntTSL 314.18□□□□□ -0.143e-10■■■■□ 22.2
SRSF1Q07955 FDPS-210ENST00000474345 713 ntTSL 313.75□□□□□ -0.213e-10■■■■□ 22.2
SRSF1Q07955 FDPS-219ENST00000495308 808 ntTSL 212.4□□□□□ -0.423e-10■■■■□ 22.2
SRSF1Q07955 FDPS-204ENST00000461507 1022 ntTSL 212.16□□□□□ -0.463e-10■■■■□ 22.2
SRSF1Q07955 FDPS-209ENST00000471117 630 ntTSL 38.48□□□□□ -1.053e-10■■■■□ 22.2
SRSF1Q07955 ANAPC5-210ENST00000536416 677 ntTSL 314.27□□□□□ -0.132e-6■■■■□ 22.1
SRSF1Q07955 ANAPC5-220ENST00000544442 915 ntTSL 513.5□□□□□ -0.252e-6■■■■□ 22.1
SRSF1Q07955 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.512e-6■■■■□ 22.1
SRSF1Q07955 ANAPC5-218ENST00000541887 2400 ntTSL 5 BASIC9.52□□□□□ -0.892e-6■■■■□ 22.1
SRSF1Q07955 ANAPC5-205ENST00000534976 3165 ntTSL 57.67□□□□□ -1.182e-6■■■■□ 22.1
SRSF1Q07955 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.13□□□□□ -1.432e-6■■■■□ 22.1
SRSF1Q07955 ANAPC5-217ENST00000541652 753 ntTSL 25.35□□□□□ -1.552e-6■■■■□ 22.1
Retrieved 100 of 14,836 protein–RNA pairs in 133.1 ms