RNA–Protein interactions for RNA: ENST00000378868.4

CRLS1-202, Transcript of cardiolipin synthase 1, humanhuman

TSL 5 BASIC

Gene CRLS1, Length 994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLS1-202ENST00000378868 AEBP2Q6ZN18 517 aaPredicted RBP28.71■■■□□ 2.19
CRLS1-202ENST00000378868 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
CRLS1-202ENST00000378868 SENP3Q9H4L4 574 aaPredicted RBP24.52■■□□□ 1.52
CRLS1-202ENST00000378868 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
CRLS1-202ENST00000378868 FOXD1Q16676 465 aa22.98■■□□□ 1.27
CRLS1-202ENST00000378868 POTEDQ86YR6 584 aa22.38■■□□□ 1.17
CRLS1-202ENST00000378868 MSH5O43196 834 aa21.71■■□□□ 1.07
CRLS1-202ENST00000378868 PIAS4Q8N2W9 510 aaPredicted RBP21.31■■□□□ 1
CRLS1-202ENST00000378868 PPP6R1Q9UPN7 881 aa20.99■□□□□ 0.95
CRLS1-202ENST00000378868 PLPPR3Q6T4P5 718 aa20.91■□□□□ 0.94
CRLS1-202ENST00000378868 ADRA2BP18089 450 aa20.88■□□□□ 0.93
CRLS1-202ENST00000378868 MAPK8IP2Q13387 824 aaPredicted RBP19.4■□□□□ 0.7
CRLS1-202ENST00000378868 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
CRLS1-202ENST00000378868 CACNB1Q02641 598 aaPredicted RBP19.06■□□□□ 0.64
CRLS1-202ENST00000378868 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
CRLS1-202ENST00000378868 DCAF8L1A6NGE4 600 aa18.64■□□□□ 0.57
CRLS1-202ENST00000378868 RNF39Q9H2S5 420 aa18.48■□□□□ 0.55
CRLS1-202ENST00000378868 HOXD11P31277 338 aaPredicted RBP18.38■□□□□ 0.53
CRLS1-202ENST00000378868 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
CRLS1-202ENST00000378868 C1QBPQ07021 282 aaKnown RBP18.14■□□□□ 0.49
CRLS1-202ENST00000378868 CNKSR2Q8WXI2 1034 aa18.05■□□□□ 0.48
CRLS1-202ENST00000378868 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
CRLS1-202ENST00000378868 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
CRLS1-202ENST00000378868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
CRLS1-202ENST00000378868 POTEHQ6S545 545 aa17.39■□□□□ 0.37
CRLS1-202ENST00000378868 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
CRLS1-202ENST00000378868 NPM3O75607 178 aaKnown RBP17.12■□□□□ 0.33
CRLS1-202ENST00000378868 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
CRLS1-202ENST00000378868 DSG3P32926 999 aa17.11■□□□□ 0.33
CRLS1-202ENST00000378868 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
CRLS1-202ENST00000378868 CAPN15O75808 1086 aa17.05■□□□□ 0.32
CRLS1-202ENST00000378868 ABCB7O75027 752 aa16.64■□□□□ 0.25
CRLS1-202ENST00000378868 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
CRLS1-202ENST00000378868 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
CRLS1-202ENST00000378868 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
CRLS1-202ENST00000378868 APLP2Q06481 763 aa16.47■□□□□ 0.23
CRLS1-202ENST00000378868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
CRLS1-202ENST00000378868 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
CRLS1-202ENST00000378868 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
CRLS1-202ENST00000378868 CHRDL2Q6WN34 429 aa16.23■□□□□ 0.19
CRLS1-202ENST00000378868 KCNA4P22459 653 aa16.22■□□□□ 0.19
CRLS1-202ENST00000378868 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
CRLS1-202ENST00000378868 POLA2Q14181 598 aa16■□□□□ 0.15
CRLS1-202ENST00000378868 SP7Q8TDD2 431 aaPredicted RBP15.99■□□□□ 0.15
CRLS1-202ENST00000378868 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
CRLS1-202ENST00000378868 AKT1S1Q96B36 256 aa15.78■□□□□ 0.12
CRLS1-202ENST00000378868 PIP4P2Q8N4L2 257 aa15.72■□□□□ 0.11
CRLS1-202ENST00000378868 REM2Q8IYK8 340 aaPredicted RBP15.66■□□□□ 0.1
CRLS1-202ENST00000378868 HAX1O00165 279 aa15.6■□□□□ 0.09
CRLS1-202ENST00000378868 ATF5Q9Y2D1 282 aaPredicted RBP15.58■□□□□ 0.08
CRLS1-202ENST00000378868 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
CRLS1-202ENST00000378868 ZBTB12Q9Y330 459 aaPredicted RBP15.57■□□□□ 0.08
CRLS1-202ENST00000378868 PITPNM1O00562 1244 aa15.53■□□□□ 0.08
CRLS1-202ENST00000378868 FXR2P51116 673 aaKnown RBP eCLIP15.5■□□□□ 0.07
CRLS1-202ENST00000378868 EVX2Q03828 476 aa15.4■□□□□ 0.06
CRLS1-202ENST00000378868 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
CRLS1-202ENST00000378868 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
CRLS1-202ENST00000378868 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
CRLS1-202ENST00000378868 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
CRLS1-202ENST00000378868 SPDYE6P0CI01 402 aa15.07■□□□□ 0
CRLS1-202ENST00000378868 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
CRLS1-202ENST00000378868 C19orf67A6NJJ6 358 aa15.03■□□□□ -0
CRLS1-202ENST00000378868 CLEC11AQ9Y240 323 aa15.02■□□□□ -0
CRLS1-202ENST00000378868 GABBR2O75899 941 aa14.98□□□□□ -0.01
CRLS1-202ENST00000378868 LHX8Q68G74 356 aa14.98□□□□□ -0.01
CRLS1-202ENST00000378868 SPDYE1Q8NFV5 336 aaPredicted RBP14.97□□□□□ -0.01
CRLS1-202ENST00000378868 FBLN2P98095 1184 aa14.93□□□□□ -0.02
CRLS1-202ENST00000378868 ZBTB22O15209 634 aa14.92□□□□□ -0.02
CRLS1-202ENST00000378868 ATXN8OSP0DMR3 200 aa14.85□□□□□ -0.03
CRLS1-202ENST00000378868 CHADLQ6NUI6 762 aa14.85□□□□□ -0.03
CRLS1-202ENST00000378868 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
CRLS1-202ENST00000378868 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
CRLS1-202ENST00000378868 ZNF692Q9BU19 519 aaPredicted RBP14.8□□□□□ -0.04
CRLS1-202ENST00000378868 POTEIP0CG38 1075 aa14.69□□□□□ -0.06
CRLS1-202ENST00000378868 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
CRLS1-202ENST00000378868 PLSCR2Q9NRY7 297 aa14.61□□□□□ -0.07
CRLS1-202ENST00000378868 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
CRLS1-202ENST00000378868 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
CRLS1-202ENST00000378868 FARP1Q9Y4F1 1045 aaPredicted RBP14.49□□□□□ -0.09
CRLS1-202ENST00000378868 DCBLD2Q96PD2 775 aa14.42□□□□□ -0.1
CRLS1-202ENST00000378868 CLCN6P51797 869 aa14.41□□□□□ -0.1
CRLS1-202ENST00000378868 ZNF579Q8NAF0 562 aaKnown RBP14.33□□□□□ -0.12
CRLS1-202ENST00000378868 ZRANB1Q9UGI0 708 aa14.28□□□□□ -0.12
CRLS1-202ENST00000378868 OTUD5Q96G74 571 aa14.25□□□□□ -0.13
CRLS1-202ENST00000378868 GALR2O43603 387 aaPredicted RBP14.24□□□□□ -0.13
CRLS1-202ENST00000378868 POTEB2H3BUK9 544 aa14.2□□□□□ -0.14
CRLS1-202ENST00000378868 POTEMA6NI47 508 aa14.16□□□□□ -0.14
CRLS1-202ENST00000378868 CREBZFQ9NS37 354 aa14.16□□□□□ -0.14
CRLS1-202ENST00000378868 POTEGQ6S5H5 508 aa14.1□□□□□ -0.15
CRLS1-202ENST00000378868 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
CRLS1-202ENST00000378868 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
CRLS1-202ENST00000378868 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
CRLS1-202ENST00000378868 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
CRLS1-202ENST00000378868 METRNQ9UJH8 293 aa13.9□□□□□ -0.18
CRLS1-202ENST00000378868 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
CRLS1-202ENST00000378868 PCDH10Q9P2E7 1040 aa13.87□□□□□ -0.19
CRLS1-202ENST00000378868 MS4A3Q96HJ5 214 aa13.86□□□□□ -0.19
CRLS1-202ENST00000378868 ASTLQ6HA08 431 aaPredicted RBP13.85□□□□□ -0.19
CRLS1-202ENST00000378868 LCE2DQ5TA82 110 aaPredicted RBP13.83□□□□□ -0.2
CRLS1-202ENST00000378868 ATMINO43313 823 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms