RNA–Protein interactions for RNA: ENST00000477276.2

PTPN23-204, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 5

Gene PTPN23, Length 882 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-204ENST00000477276 NISCHQ9Y2I1 1504 aa43.08■■■■■ 4.49
PTPN23-204ENST00000477276 CCDC180Q9P1Z9 1646 aa38.32■■■■□ 3.73
PTPN23-204ENST00000477276 ABCC9O60706 1549 aa37.32■■■■□ 3.57
PTPN23-204ENST00000477276 ZCCHC6Q5VYS8 1495 aaKnown RBP35.96■■■■□ 3.35
PTPN23-204ENST00000477276 RB1CC1Q8TDY2 1594 aa35.94■■■■□ 3.34
PTPN23-204ENST00000477276 NACADO15069 1562 aa35.93■■■■□ 3.34
PTPN23-204ENST00000477276 MYO15BQ96JP2 1530 aa35.78■■■■□ 3.32
PTPN23-204ENST00000477276 DCAF8L2P0C7V8 631 aa35.69■■■■□ 3.3
PTPN23-204ENST00000477276 DCAF1Q9Y4B6 1507 aa35.67■■■■□ 3.3
PTPN23-204ENST00000477276 UNC13AQ9UPW8 1703 aa35.3■■■■□ 3.24
PTPN23-204ENST00000477276 BICRAQ9NZM4 1560 aa34.98■■■■□ 3.19
PTPN23-204ENST00000477276 SCRIBQ14160 1630 aa34.95■■■■□ 3.19
PTPN23-204ENST00000477276 PABPN1Q86U42 306 aaKnown RBP eCLIP34.82■■■■□ 3.16
PTPN23-204ENST00000477276 SHROOM4Q9ULL8 1493 aa34.52■■■■□ 3.12
PTPN23-204ENST00000477276 DNAJC5BQ9UF47 199 aa34.19■■■■□ 3.06
PTPN23-204ENST00000477276 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
PTPN23-204ENST00000477276 CC2D2AQ9P2K1 1620 aa33.82■■■■□ 3
PTPN23-204ENST00000477276 CECR2Q9BXF3 1484 aa33.57■■■□□ 2.97
PTPN23-204ENST00000477276 SMARCA4P51532 1647 aa33.46■■■□□ 2.95
PTPN23-204ENST00000477276 BAZ1AQ9NRL2 1556 aaPredicted RBP33.36■■■□□ 2.93
PTPN23-204ENST00000477276 MROH2BQ7Z745 1585 aa33.23■■■□□ 2.91
PTPN23-204ENST00000477276 ATAD2BQ9ULI0 1458 aa33.2■■■□□ 2.91
PTPN23-204ENST00000477276 NCAPD3P42695 1498 aa33.15■■■□□ 2.9
PTPN23-204ENST00000477276 PEG3Q9GZU2 1588 aa33.15■■■□□ 2.9
PTPN23-204ENST00000477276 SMARCA2P51531 1590 aa33.14■■■□□ 2.9
PTPN23-204ENST00000477276 HMGXB3Q12766 1538 aa33.05■■■□□ 2.88
PTPN23-204ENST00000477276 BAZ1BQ9UIG0 1483 aaKnown RBP32.9■■■□□ 2.86
PTPN23-204ENST00000477276 WIZO95785 1651 aa32.9■■■□□ 2.86
PTPN23-204ENST00000477276 RSF1Q96T23 1441 aaPredicted RBP32.84■■■□□ 2.85
PTPN23-204ENST00000477276 TOP2AP11388 1531 aaKnown RBP32.53■■■□□ 2.8
PTPN23-204ENST00000477276 NESP48681 1621 aa32.37■■■□□ 2.77
PTPN23-204ENST00000477276 LAMC3Q9Y6N6 1575 aa32.28■■■□□ 2.76
PTPN23-204ENST00000477276 CADPSQ9ULU8 1353 aa32.14■■■□□ 2.74
PTPN23-204ENST00000477276 CCDC88BA6NC98 1476 aa32.1■■■□□ 2.73
PTPN23-204ENST00000477276 ERCC6Q03468 1493 aa32.1■■■□□ 2.73
PTPN23-204ENST00000477276 KIF21AQ7Z4S6 1674 aa32.05■■■□□ 2.72
PTPN23-204ENST00000477276 CFTRP13569 1480 aa32.03■■■□□ 2.72
PTPN23-204ENST00000477276 PDS5BQ9NTI5 1447 aa31.96■■■□□ 2.71
PTPN23-204ENST00000477276 THOC2Q8NI27 1593 aaKnown RBP31.94■■■□□ 2.7
PTPN23-204ENST00000477276 PRDM2Q13029 1718 aa31.9■■■□□ 2.7
PTPN23-204ENST00000477276 SUPT5HO00267 1087 aaKnown RBP31.9■■■□□ 2.7
PTPN23-204ENST00000477276 FANCD2Q9BXW9 1451 aa31.81■■■□□ 2.68
PTPN23-204ENST00000477276 CUX2O14529 1486 aa31.79■■■□□ 2.68
PTPN23-204ENST00000477276 CEP164Q9UPV0 1460 aa31.76■■■□□ 2.67
PTPN23-204ENST00000477276 MRC2Q9UBG0 1479 aa31.72■■■□□ 2.67
PTPN23-204ENST00000477276 WDR62O43379 1518 aa31.67■■■□□ 2.66
PTPN23-204ENST00000477276 URB2Q14146 1524 aaKnown RBP31.55■■■□□ 2.64
PTPN23-204ENST00000477276 TOPBP1Q92547 1522 aa31.34■■■□□ 2.61
PTPN23-204ENST00000477276 DNMBPQ6XZF7 1577 aa31.33■■■□□ 2.61
PTPN23-204ENST00000477276 ABCC8Q09428 1581 aa31.25■■■□□ 2.59
PTPN23-204ENST00000477276 CUX1P39880 1505 aa31.18■■■□□ 2.58
PTPN23-204ENST00000477276 POLA1P09884 1462 aaPredicted RBP31.09■■■□□ 2.57
PTPN23-204ENST00000477276 IFT140Q96RY7 1462 aa31.08■■■□□ 2.57
PTPN23-204ENST00000477276 TARBP1Q13395 1621 aaKnown RBP31.06■■■□□ 2.56
PTPN23-204ENST00000477276 FGD5Q6ZNL6 1462 aa31.01■■■□□ 2.56
PTPN23-204ENST00000477276 ZNF608Q9ULD9 1512 aaPredicted RBP31■■■□□ 2.55
PTPN23-204ENST00000477276 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
PTPN23-204ENST00000477276 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.55
PTPN23-204ENST00000477276 RAD54L2Q9Y4B4 1467 aa30.94■■■□□ 2.54
PTPN23-204ENST00000477276 WRNQ14191 1432 aaPredicted RBP eCLIP30.92■■■□□ 2.54
PTPN23-204ENST00000477276 TOP2BQ02880 1626 aa30.92■■■□□ 2.54
PTPN23-204ENST00000477276 EIF4G3O43432 1585 aaKnown RBP30.92■■■□□ 2.54
PTPN23-204ENST00000477276 WDR97A6NE52 1622 aa30.88■■■□□ 2.53
PTPN23-204ENST00000477276 SOGA1O94964 1423 aa30.87■■■□□ 2.53
PTPN23-204ENST00000477276 AQRO60306 1485 aaKnown RBP eCLIP30.77■■■□□ 2.525e-7■■■■□ 19.7
PTPN23-204ENST00000477276 ABCA10Q8WWZ4 1543 aa30.73■■■□□ 2.51
PTPN23-204ENST00000477276 TDRD9Q8NDG6 1382 aaKnown RBP30.69■■■□□ 2.5
PTPN23-204ENST00000477276 ABCA5Q8WWZ7 1642 aa30.67■■■□□ 2.5
PTPN23-204ENST00000477276 DNAJC5Q9H3Z4 198 aa30.63■■■□□ 2.49
PTPN23-204ENST00000477276 PBRM1Q86U86 1689 aa30.6■■■□□ 2.49
PTPN23-204ENST00000477276 GAPVD1Q14C86 1478 aa30.55■■■□□ 2.48
PTPN23-204ENST00000477276 GRIN2BQ13224 1484 aa30.53■■■□□ 2.48
PTPN23-204ENST00000477276 SNAPC4Q5SXM2 1469 aa30.53■■■□□ 2.48
PTPN23-204ENST00000477276 CHD1O14646 1710 aa30.52■■■□□ 2.48
PTPN23-204ENST00000477276 MAGI1Q96QZ7 1491 aaPredicted RBP30.47■■■□□ 2.47
PTPN23-204ENST00000477276 ADAMTS12P58397 1594 aa30.36■■■□□ 2.45
PTPN23-204ENST00000477276 SYNJ2O15056 1496 aa30.35■■■□□ 2.45
PTPN23-204ENST00000477276 ERICH3Q5RHP9 1530 aa30.35■■■□□ 2.45
PTPN23-204ENST00000477276 OSCARQ8IYS5 282 aa30.34■■■□□ 2.45
PTPN23-204ENST00000477276 KIF27Q86VH2 1401 aa30.22■■■□□ 2.43
PTPN23-204ENST00000477276 FBLN2P98095 1184 aa30.22■■■□□ 2.43
PTPN23-204ENST00000477276 FHAD1B1AJZ9 1412 aa30.2■■■□□ 2.42
PTPN23-204ENST00000477276 CLASP1Q7Z460 1538 aa30.19■■■□□ 2.42
PTPN23-204ENST00000477276 CHMP7Q8WUX9 453 aaPredicted RBP30.18■■■□□ 2.42
PTPN23-204ENST00000477276 GRIN2AQ12879 1464 aa30.18■■■□□ 2.42
PTPN23-204ENST00000477276 IGF1RP08069 1367 aa30.13■■■□□ 2.41
PTPN23-204ENST00000477276 CUL7Q14999 1698 aa30.11■■■□□ 2.41
PTPN23-204ENST00000477276 TRIM41Q8WV44 630 aa30.1■■■□□ 2.41
PTPN23-204ENST00000477276 CEP170Q5SW79 1584 aa30.09■■■□□ 2.41
PTPN23-204ENST00000477276 RUSC2Q8N2Y8 1516 aa30.09■■■□□ 2.41
PTPN23-204ENST00000477276 NUP160Q12769 1436 aa30.06■■■□□ 2.4
PTPN23-204ENST00000477276 RIMBP3CA6NJZ7 1639 aa30.06■■■□□ 2.4
PTPN23-204ENST00000477276 RIMBP3BA6NNM3 1639 aa30.06■■■□□ 2.4
PTPN23-204ENST00000477276 RIMBP3Q9UFD9 1639 aa30.06■■■□□ 2.4
PTPN23-204ENST00000477276 ARHGEF11O15085 1522 aa30.03■■■□□ 2.4
PTPN23-204ENST00000477276 CARMIL1Q5VZK9 1371 aa29.91■■■□□ 2.38
PTPN23-204ENST00000477276 CHIC1Q5VXU3 224 aa29.89■■■□□ 2.38
PTPN23-204ENST00000477276 SHROOM2Q13796 1616 aa29.89■■■□□ 2.37
PTPN23-204ENST00000477276 ARAP1Q96P48 1450 aa29.82■■■□□ 2.36
PTPN23-204ENST00000477276 ERCC6L2Q5T890 1561 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms