RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
UBR1-210ENST00000569337 CCDC180Q9P1Z9 1646 aa20.17■□□□□ 0.82
UBR1-210ENST00000569337 ABCC9O60706 1549 aa20■□□□□ 0.79
UBR1-210ENST00000569337 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
UBR1-210ENST00000569337 RB1CC1Q8TDY2 1594 aa19.13■□□□□ 0.65
UBR1-210ENST00000569337 NACADO15069 1562 aa19.06■□□□□ 0.64
UBR1-210ENST00000569337 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
UBR1-210ENST00000569337 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
UBR1-210ENST00000569337 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
UBR1-210ENST00000569337 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
UBR1-210ENST00000569337 UNC13AQ9UPW8 1703 aa18.56■□□□□ 0.56
UBR1-210ENST00000569337 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.56
UBR1-210ENST00000569337 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
UBR1-210ENST00000569337 SCRIBQ14160 1630 aa18.45■□□□□ 0.54
UBR1-210ENST00000569337 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.53
UBR1-210ENST00000569337 EIF4G1Q04637 1599 aaKnown RBP18.07■□□□□ 0.48
UBR1-210ENST00000569337 CC2D2AQ9P2K1 1620 aa18.02■□□□□ 0.48
UBR1-210ENST00000569337 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
UBR1-210ENST00000569337 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
UBR1-210ENST00000569337 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
UBR1-210ENST00000569337 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
UBR1-210ENST00000569337 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
UBR1-210ENST00000569337 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
UBR1-210ENST00000569337 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
UBR1-210ENST00000569337 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
UBR1-210ENST00000569337 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
UBR1-210ENST00000569337 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
UBR1-210ENST00000569337 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
UBR1-210ENST00000569337 WIZO95785 1651 aa17.27■□□□□ 0.36
UBR1-210ENST00000569337 ERCC6Q03468 1493 aa17.27■□□□□ 0.36
UBR1-210ENST00000569337 NESP48681 1621 aa17.25■□□□□ 0.35
UBR1-210ENST00000569337 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
UBR1-210ENST00000569337 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
UBR1-210ENST00000569337 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
UBR1-210ENST00000569337 TOP2AP11388 1531 aaKnown RBP17.11■□□□□ 0.33
UBR1-210ENST00000569337 CUX2O14529 1486 aa17.1■□□□□ 0.33
UBR1-210ENST00000569337 CFTRP13569 1480 aa16.98■□□□□ 0.31
UBR1-210ENST00000569337 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
UBR1-210ENST00000569337 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
UBR1-210ENST00000569337 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
UBR1-210ENST00000569337 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
UBR1-210ENST00000569337 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
UBR1-210ENST00000569337 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
UBR1-210ENST00000569337 SUPT5HO00267 1087 aaKnown RBP16.84■□□□□ 0.29
UBR1-210ENST00000569337 WDR62O43379 1518 aa16.81■□□□□ 0.28
UBR1-210ENST00000569337 DNAJC5Q9H3Z4 198 aa16.81■□□□□ 0.28
UBR1-210ENST00000569337 URB2Q14146 1524 aaKnown RBP16.74■□□□□ 0.27
UBR1-210ENST00000569337 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
UBR1-210ENST00000569337 ABCC8Q09428 1581 aa16.63■□□□□ 0.25
UBR1-210ENST00000569337 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
UBR1-210ENST00000569337 IFT140Q96RY7 1462 aa16.57■□□□□ 0.24
UBR1-210ENST00000569337 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
UBR1-210ENST00000569337 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
UBR1-210ENST00000569337 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
UBR1-210ENST00000569337 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
UBR1-210ENST00000569337 SOGA1O94964 1423 aa16.45■□□□□ 0.22
UBR1-210ENST00000569337 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
UBR1-210ENST00000569337 CUX1P39880 1505 aa16.42■□□□□ 0.22
UBR1-210ENST00000569337 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBR1-210ENST00000569337 FGD5Q6ZNL6 1462 aa16.41■□□□□ 0.22
UBR1-210ENST00000569337 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
UBR1-210ENST00000569337 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
UBR1-210ENST00000569337 EIF4G3O43432 1585 aaKnown RBP16.36■□□□□ 0.21
UBR1-210ENST00000569337 FBLN2P98095 1184 aa16.33■□□□□ 0.2
UBR1-210ENST00000569337 WRNQ14191 1432 aaPredicted RBP eCLIP16.32■□□□□ 0.2
UBR1-210ENST00000569337 WDR97A6NE52 1622 aa16.26■□□□□ 0.19
UBR1-210ENST00000569337 GRIN2BQ13224 1484 aa16.25■□□□□ 0.19
UBR1-210ENST00000569337 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
UBR1-210ENST00000569337 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
UBR1-210ENST00000569337 GAPVD1Q14C86 1478 aa16.23■□□□□ 0.19
UBR1-210ENST00000569337 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
UBR1-210ENST00000569337 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
UBR1-210ENST00000569337 SNAPC4Q5SXM2 1469 aa16.22■□□□□ 0.19
UBR1-210ENST00000569337 SYNJ1O43426 1573 aa16.21■□□□□ 0.18
UBR1-210ENST00000569337 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
UBR1-210ENST00000569337 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
UBR1-210ENST00000569337 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
UBR1-210ENST00000569337 AEBP2Q6ZN18 517 aaPredicted RBP16.16■□□□□ 0.18
UBR1-210ENST00000569337 SYNJ2O15056 1496 aa16.15■□□□□ 0.18
UBR1-210ENST00000569337 CHD1O14646 1710 aa16.14■□□□□ 0.17
UBR1-210ENST00000569337 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
UBR1-210ENST00000569337 ARHGEF11O15085 1522 aa16.09■□□□□ 0.17
UBR1-210ENST00000569337 PBRM1Q86U86 1689 aa16.08■□□□□ 0.17
UBR1-210ENST00000569337 RIMBP3CA6NJZ7 1639 aa16.07■□□□□ 0.16
UBR1-210ENST00000569337 RIMBP3BA6NNM3 1639 aa16.07■□□□□ 0.16
UBR1-210ENST00000569337 RIMBP3Q9UFD9 1639 aa16.07■□□□□ 0.16
UBR1-210ENST00000569337 FHAD1B1AJZ9 1412 aa16.05■□□□□ 0.16
UBR1-210ENST00000569337 CYB5RLQ6IPT4 315 aa16.05■□□□□ 0.16
UBR1-210ENST00000569337 ERICH3Q5RHP9 1530 aa16.04■□□□□ 0.16
UBR1-210ENST00000569337 CLASP1Q7Z460 1538 aa16.02■□□□□ 0.15
UBR1-210ENST00000569337 GRIN2AQ12879 1464 aa16.02■□□□□ 0.15
UBR1-210ENST00000569337 KIF27Q86VH2 1401 aa16■□□□□ 0.15
UBR1-210ENST00000569337 ADAMTS12P58397 1594 aa16■□□□□ 0.15
UBR1-210ENST00000569337 IGF1RP08069 1367 aa15.96■□□□□ 0.15
UBR1-210ENST00000569337 ARAP1Q96P48 1450 aa15.96■□□□□ 0.14
UBR1-210ENST00000569337 NUP160Q12769 1436 aa15.95■□□□□ 0.14
UBR1-210ENST00000569337 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
UBR1-210ENST00000569337 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
UBR1-210ENST00000569337 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
UBR1-210ENST00000569337 CUL7Q14999 1698 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms