RNA–Protein interactions for RNA: ENST00000584951.1

DDX42-219, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-219ENST00000584951 NISCHQ9Y2I1 1504 aa32.1■■■□□ 2.73
DDX42-219ENST00000584951 ABCC9O60706 1549 aa29.27■■■□□ 2.28
DDX42-219ENST00000584951 CCDC180Q9P1Z9 1646 aa29.01■■■□□ 2.23
DDX42-219ENST00000584951 DNAJC5BQ9UF47 199 aa27.81■■■□□ 2.04
DDX42-219ENST00000584951 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
DDX42-219ENST00000584951 NACADO15069 1562 aa27.51■■□□□ 1.99
DDX42-219ENST00000584951 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
DDX42-219ENST00000584951 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
DDX42-219ENST00000584951 DCAF8L2P0C7V8 631 aa27.1■■□□□ 1.93
DDX42-219ENST00000584951 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
DDX42-219ENST00000584951 BICRAQ9NZM4 1560 aa26.98■■□□□ 1.91
DDX42-219ENST00000584951 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
DDX42-219ENST00000584951 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
DDX42-219ENST00000584951 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
DDX42-219ENST00000584951 CC2D2AQ9P2K1 1620 aa26.47■■□□□ 1.83
DDX42-219ENST00000584951 CECR2Q9BXF3 1484 aa26.44■■□□□ 1.82
DDX42-219ENST00000584951 EIF4G1Q04637 1599 aaKnown RBP26.33■■□□□ 1.81
DDX42-219ENST00000584951 SCRIBQ14160 1630 aa26.32■■□□□ 1.8
DDX42-219ENST00000584951 DNAJC5Q9H3Z4 198 aa25.85■■□□□ 1.73
DDX42-219ENST00000584951 CUX2O14529 1486 aa25.47■■□□□ 1.67
DDX42-219ENST00000584951 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
DDX42-219ENST00000584951 ERCC6Q03468 1493 aa25.31■■□□□ 1.64
DDX42-219ENST00000584951 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
DDX42-219ENST00000584951 HMGXB3Q12766 1538 aa25.18■■□□□ 1.62
DDX42-219ENST00000584951 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
DDX42-219ENST00000584951 SMARCA4P51532 1647 aa25.12■■□□□ 1.61
DDX42-219ENST00000584951 NESP48681 1621 aa25.04■■□□□ 1.6
DDX42-219ENST00000584951 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
DDX42-219ENST00000584951 BAZ1AQ9NRL2 1556 aaPredicted RBP24.95■■□□□ 1.58
DDX42-219ENST00000584951 THOC2Q8NI27 1593 aaKnown RBP24.93■■□□□ 1.58
DDX42-219ENST00000584951 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
DDX42-219ENST00000584951 LAMC3Q9Y6N6 1575 aa24.88■■□□□ 1.57
DDX42-219ENST00000584951 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
DDX42-219ENST00000584951 PDS5BQ9NTI5 1447 aa24.73■■□□□ 1.55
DDX42-219ENST00000584951 MROH2BQ7Z745 1585 aa24.7■■□□□ 1.54
DDX42-219ENST00000584951 CADPSQ9ULU8 1353 aa24.58■■□□□ 1.53
DDX42-219ENST00000584951 MRC2Q9UBG0 1479 aa24.53■■□□□ 1.52
DDX42-219ENST00000584951 WDR62O43379 1518 aa24.51■■□□□ 1.51
DDX42-219ENST00000584951 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
DDX42-219ENST00000584951 WIZO95785 1651 aa24.37■■□□□ 1.49
DDX42-219ENST00000584951 CEP164Q9UPV0 1460 aa24.35■■□□□ 1.49
DDX42-219ENST00000584951 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
DDX42-219ENST00000584951 CFTRP13569 1480 aa24.24■■□□□ 1.47
DDX42-219ENST00000584951 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
DDX42-219ENST00000584951 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
DDX42-219ENST00000584951 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
DDX42-219ENST00000584951 RSF1Q96T23 1441 aaPredicted RBP24.06■■□□□ 1.44
DDX42-219ENST00000584951 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
DDX42-219ENST00000584951 RIMBP3CA6NJZ7 1639 aa23.93■■□□□ 1.42
DDX42-219ENST00000584951 RIMBP3BA6NNM3 1639 aa23.93■■□□□ 1.42
DDX42-219ENST00000584951 RIMBP3Q9UFD9 1639 aa23.93■■□□□ 1.42
DDX42-219ENST00000584951 IFT140Q96RY7 1462 aa23.9■■□□□ 1.42
DDX42-219ENST00000584951 ZNF608Q9ULD9 1512 aaPredicted RBP23.86■■□□□ 1.41
DDX42-219ENST00000584951 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
DDX42-219ENST00000584951 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
DDX42-219ENST00000584951 CCDC88BA6NC98 1476 aa23.78■■□□□ 1.4
DDX42-219ENST00000584951 ABCC8Q09428 1581 aa23.75■■□□□ 1.39
DDX42-219ENST00000584951 EIF4G3O43432 1585 aaKnown RBP23.73■■□□□ 1.39
DDX42-219ENST00000584951 DNMBPQ6XZF7 1577 aa23.68■■□□□ 1.38
DDX42-219ENST00000584951 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
DDX42-219ENST00000584951 CHD1O14646 1710 aa23.62■■□□□ 1.37
DDX42-219ENST00000584951 CYB5RLQ6IPT4 315 aa23.6■■□□□ 1.37
DDX42-219ENST00000584951 AQRO60306 1485 aaKnown RBP eCLIP23.58■■□□□ 1.372e-6■■■■□ 21.7
DDX42-219ENST00000584951 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
DDX42-219ENST00000584951 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
DDX42-219ENST00000584951 TRHP20396 242 aaPredicted RBP23.44■■□□□ 1.34
DDX42-219ENST00000584951 FBLN2P98095 1184 aa23.44■■□□□ 1.34
DDX42-219ENST00000584951 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
DDX42-219ENST00000584951 RAD54L2Q9Y4B4 1467 aa23.41■■□□□ 1.34
DDX42-219ENST00000584951 SOGA1O94964 1423 aa23.39■■□□□ 1.33
DDX42-219ENST00000584951 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
DDX42-219ENST00000584951 TDRD9Q8NDG6 1382 aaKnown RBP23.37■■□□□ 1.33
DDX42-219ENST00000584951 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
DDX42-219ENST00000584951 MAGI1Q96QZ7 1491 aaPredicted RBP23.31■■□□□ 1.32
DDX42-219ENST00000584951 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
DDX42-219ENST00000584951 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
DDX42-219ENST00000584951 CHMP7Q8WUX9 453 aaPredicted RBP23.26■■□□□ 1.31
DDX42-219ENST00000584951 GRIN2BQ13224 1484 aa23.25■■□□□ 1.31
DDX42-219ENST00000584951 CUX1P39880 1505 aa23.23■■□□□ 1.31
DDX42-219ENST00000584951 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
DDX42-219ENST00000584951 PBRM1Q86U86 1689 aa23.13■■□□□ 1.29
DDX42-219ENST00000584951 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
DDX42-219ENST00000584951 ABCA5Q8WWZ7 1642 aa23.06■■□□□ 1.28
DDX42-219ENST00000584951 ABCA10Q8WWZ4 1543 aa23.06■■□□□ 1.28
DDX42-219ENST00000584951 AEBP2Q6ZN18 517 aaPredicted RBP23.05■■□□□ 1.28
DDX42-219ENST00000584951 GRIN2AQ12879 1464 aa22.95■■□□□ 1.26
DDX42-219ENST00000584951 ERCC6L2Q5T890 1561 aa22.93■■□□□ 1.26
DDX42-219ENST00000584951 NUP160Q12769 1436 aa22.92■■□□□ 1.26
DDX42-219ENST00000584951 ADAMTS12P58397 1594 aa22.9■■□□□ 1.26
DDX42-219ENST00000584951 CEP170Q5SW79 1584 aa22.89■■□□□ 1.26
DDX42-219ENST00000584951 SHROOM2Q13796 1616 aa22.87■■□□□ 1.25
DDX42-219ENST00000584951 WRNQ14191 1432 aaPredicted RBP eCLIP22.86■■□□□ 1.25
DDX42-219ENST00000584951 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
DDX42-219ENST00000584951 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
DDX42-219ENST00000584951 TOP2BQ02880 1626 aa22.78■■□□□ 1.24
DDX42-219ENST00000584951 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
DDX42-219ENST00000584951 KIF13AQ9H1H9 1805 aa22.75■■□□□ 1.23
DDX42-219ENST00000584951 PRG4Q92954 1404 aaPredicted RBP22.67■■□□□ 1.22
DDX42-219ENST00000584951 JPH4Q96JJ6 628 aa22.63■■□□□ 1.21
DDX42-219ENST00000584951 ABCC10Q5T3U5 1492 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms