RNA–Protein interactions for RNA: ENST00000528083.1

AP000873.2-209, humanhuman

TSL 4 BASIC

Gene AP000873.2, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000873.2-209ENST00000528083 NISCHQ9Y2I1 1504 aa18.22■□□□□ 0.51
AP000873.2-209ENST00000528083 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
AP000873.2-209ENST00000528083 ABCC9O60706 1549 aa16.09■□□□□ 0.17
AP000873.2-209ENST00000528083 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
AP000873.2-209ENST00000528083 NACADO15069 1562 aa15.39■□□□□ 0.05
AP000873.2-209ENST00000528083 MYO15BQ96JP2 1530 aa15.27■□□□□ 0.04
AP000873.2-209ENST00000528083 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
AP000873.2-209ENST00000528083 ZCCHC6Q5VYS8 1495 aaKnown RBP15.15■□□□□ 0.02
AP000873.2-209ENST00000528083 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
AP000873.2-209ENST00000528083 UNC13AQ9UPW8 1703 aa15.09■□□□□ 0.01
AP000873.2-209ENST00000528083 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
AP000873.2-209ENST00000528083 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
AP000873.2-209ENST00000528083 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
AP000873.2-209ENST00000528083 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
AP000873.2-209ENST00000528083 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
AP000873.2-209ENST00000528083 EIF4G1Q04637 1599 aaKnown RBP14.6□□□□□ -0.07
AP000873.2-209ENST00000528083 CC2D2AQ9P2K1 1620 aa14.58□□□□□ -0.08
AP000873.2-209ENST00000528083 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
AP000873.2-209ENST00000528083 NCAPD3P42695 1498 aa14.19□□□□□ -0.14
AP000873.2-209ENST00000528083 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
AP000873.2-209ENST00000528083 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
AP000873.2-209ENST00000528083 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.14
AP000873.2-209ENST00000528083 SMARCA2P51531 1590 aa14.14□□□□□ -0.15
AP000873.2-209ENST00000528083 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
AP000873.2-209ENST00000528083 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
AP000873.2-209ENST00000528083 BAZ1BQ9UIG0 1483 aaKnown RBP14.02□□□□□ -0.16
AP000873.2-209ENST00000528083 MROH2BQ7Z745 1585 aa14.01□□□□□ -0.17
AP000873.2-209ENST00000528083 ERCC6Q03468 1493 aa13.89□□□□□ -0.19
AP000873.2-209ENST00000528083 CUX2O14529 1486 aa13.87□□□□□ -0.19
AP000873.2-209ENST00000528083 NESP48681 1621 aa13.86□□□□□ -0.19
AP000873.2-209ENST00000528083 LAMC3Q9Y6N6 1575 aa13.86□□□□□ -0.19
AP000873.2-209ENST00000528083 WIZO95785 1651 aa13.85□□□□□ -0.19
AP000873.2-209ENST00000528083 RSF1Q96T23 1441 aaPredicted RBP13.79□□□□□ -0.2
AP000873.2-209ENST00000528083 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
AP000873.2-209ENST00000528083 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
AP000873.2-209ENST00000528083 CADPSQ9ULU8 1353 aa13.74□□□□□ -0.21
AP000873.2-209ENST00000528083 KIF21AQ7Z4S6 1674 aa13.73□□□□□ -0.21
AP000873.2-209ENST00000528083 TOP2AP11388 1531 aaKnown RBP13.72□□□□□ -0.21
AP000873.2-209ENST00000528083 AEBP2Q6ZN18 517 aaPredicted RBP13.68□□□□□ -0.22
AP000873.2-209ENST00000528083 CFTRP13569 1480 aa13.64□□□□□ -0.23
AP000873.2-209ENST00000528083 DNAJC5Q9H3Z4 198 aa13.64□□□□□ -0.23
AP000873.2-209ENST00000528083 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
AP000873.2-209ENST00000528083 WDR62O43379 1518 aa13.6□□□□□ -0.23
AP000873.2-209ENST00000528083 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
AP000873.2-209ENST00000528083 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
AP000873.2-209ENST00000528083 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
AP000873.2-209ENST00000528083 CCDC88BA6NC98 1476 aa13.54□□□□□ -0.24
AP000873.2-209ENST00000528083 URB2Q14146 1524 aaKnown RBP13.46□□□□□ -0.25
AP000873.2-209ENST00000528083 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
AP000873.2-209ENST00000528083 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
AP000873.2-209ENST00000528083 DNMBPQ6XZF7 1577 aa13.33□□□□□ -0.28
AP000873.2-209ENST00000528083 IFT140Q96RY7 1462 aa13.33□□□□□ -0.28
AP000873.2-209ENST00000528083 ZNF608Q9ULD9 1512 aaPredicted RBP13.25□□□□□ -0.29
AP000873.2-209ENST00000528083 TARBP1Q13395 1621 aaKnown RBP13.24□□□□□ -0.29
AP000873.2-209ENST00000528083 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
AP000873.2-209ENST00000528083 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
AP000873.2-209ENST00000528083 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
AP000873.2-209ENST00000528083 SUPT5HO00267 1087 aaKnown RBP13.2□□□□□ -0.3
AP000873.2-209ENST00000528083 CUX1P39880 1505 aa13.17□□□□□ -0.3
AP000873.2-209ENST00000528083 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
AP000873.2-209ENST00000528083 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
AP000873.2-209ENST00000528083 SOGA1O94964 1423 aa13.14□□□□□ -0.31
AP000873.2-209ENST00000528083 AQRO60306 1485 aaKnown RBP eCLIP13.14□□□□□ -0.313e-7■■□□□ 14
AP000873.2-209ENST00000528083 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
AP000873.2-209ENST00000528083 TDRD9Q8NDG6 1382 aaKnown RBP13.08□□□□□ -0.31
AP000873.2-209ENST00000528083 CHD1O14646 1710 aa13.08□□□□□ -0.32
AP000873.2-209ENST00000528083 GRIN2BQ13224 1484 aa13.04□□□□□ -0.32
AP000873.2-209ENST00000528083 MAGI1Q96QZ7 1491 aaPredicted RBP13.04□□□□□ -0.32
AP000873.2-209ENST00000528083 RIMBP3CA6NJZ7 1639 aa13.04□□□□□ -0.32
AP000873.2-209ENST00000528083 RIMBP3BA6NNM3 1639 aa13.04□□□□□ -0.32
AP000873.2-209ENST00000528083 RIMBP3Q9UFD9 1639 aa13.04□□□□□ -0.32
AP000873.2-209ENST00000528083 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
AP000873.2-209ENST00000528083 SNAPC4Q5SXM2 1469 aa13.04□□□□□ -0.32
AP000873.2-209ENST00000528083 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
AP000873.2-209ENST00000528083 BIVM-ERCC5R4GMW8 1640 aa13.03□□□□□ -0.32
AP000873.2-209ENST00000528083 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
AP000873.2-209ENST00000528083 ARHGEF11O15085 1522 aa13.02□□□□□ -0.33
AP000873.2-209ENST00000528083 WRNQ14191 1432 aaPredicted RBP eCLIP13.01□□□□□ -0.33
AP000873.2-209ENST00000528083 ABCA5Q8WWZ7 1642 aa13.01□□□□□ -0.33
AP000873.2-209ENST00000528083 PBRM1Q86U86 1689 aa13.01□□□□□ -0.33
AP000873.2-209ENST00000528083 GAPVD1Q14C86 1478 aa13□□□□□ -0.33
AP000873.2-209ENST00000528083 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
AP000873.2-209ENST00000528083 SYNJ2O15056 1496 aa12.98□□□□□ -0.33
AP000873.2-209ENST00000528083 FBLN2P98095 1184 aa12.98□□□□□ -0.33
AP000873.2-209ENST00000528083 CLASP1Q7Z460 1538 aa12.96□□□□□ -0.33
AP000873.2-209ENST00000528083 CHMP7Q8WUX9 453 aaPredicted RBP12.95□□□□□ -0.34
AP000873.2-209ENST00000528083 ADAMTS12P58397 1594 aa12.9□□□□□ -0.35
AP000873.2-209ENST00000528083 ERICH3Q5RHP9 1530 aa12.89□□□□□ -0.35
AP000873.2-209ENST00000528083 ARAP1Q96P48 1450 aa12.89□□□□□ -0.35
AP000873.2-209ENST00000528083 GRIN2AQ12879 1464 aa12.88□□□□□ -0.35
AP000873.2-209ENST00000528083 FHAD1B1AJZ9 1412 aa12.86□□□□□ -0.35
AP000873.2-209ENST00000528083 CYB5RLQ6IPT4 315 aa12.85□□□□□ -0.35
AP000873.2-209ENST00000528083 NUP160Q12769 1436 aa12.84□□□□□ -0.35
AP000873.2-209ENST00000528083 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
AP000873.2-209ENST00000528083 SHROOM2Q13796 1616 aa12.77□□□□□ -0.36
AP000873.2-209ENST00000528083 KIF27Q86VH2 1401 aa12.76□□□□□ -0.37
AP000873.2-209ENST00000528083 CUL7Q14999 1698 aa12.73□□□□□ -0.37
AP000873.2-209ENST00000528083 ERCC6L2Q5T890 1561 aa12.72□□□□□ -0.37
AP000873.2-209ENST00000528083 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
AP000873.2-209ENST00000528083 IGF1RP08069 1367 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms