RNA–Protein interactions for RNA: ENST00000500634.2

AP000873.2-208, humanhuman

TSL 1 (best) BASIC

Gene AP000873.2, Length 876 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000873.2-208ENST00000500634 NISCHQ9Y2I1 1504 aa24.17■■□□□ 1.46
AP000873.2-208ENST00000500634 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
AP000873.2-208ENST00000500634 ABCC9O60706 1549 aa21.29■■□□□ 1
AP000873.2-208ENST00000500634 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
AP000873.2-208ENST00000500634 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
AP000873.2-208ENST00000500634 NACADO15069 1562 aa20.28■□□□□ 0.84
AP000873.2-208ENST00000500634 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
AP000873.2-208ENST00000500634 MYO15BQ96JP2 1530 aa20.07■□□□□ 0.8
AP000873.2-208ENST00000500634 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
AP000873.2-208ENST00000500634 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.77
AP000873.2-208ENST00000500634 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
AP000873.2-208ENST00000500634 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
AP000873.2-208ENST00000500634 SCRIBQ14160 1630 aa19.7■□□□□ 0.74
AP000873.2-208ENST00000500634 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
AP000873.2-208ENST00000500634 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
AP000873.2-208ENST00000500634 EIF4G1Q04637 1599 aaKnown RBP19.25■□□□□ 0.67
AP000873.2-208ENST00000500634 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
AP000873.2-208ENST00000500634 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
AP000873.2-208ENST00000500634 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
AP000873.2-208ENST00000500634 BAZ1AQ9NRL2 1556 aaPredicted RBP18.74■□□□□ 0.59
AP000873.2-208ENST00000500634 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
AP000873.2-208ENST00000500634 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
AP000873.2-208ENST00000500634 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
AP000873.2-208ENST00000500634 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.58
AP000873.2-208ENST00000500634 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
AP000873.2-208ENST00000500634 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.57
AP000873.2-208ENST00000500634 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
AP000873.2-208ENST00000500634 WIZO95785 1651 aa18.43■□□□□ 0.54
AP000873.2-208ENST00000500634 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
AP000873.2-208ENST00000500634 RSF1Q96T23 1441 aaPredicted RBP18.38■□□□□ 0.53
AP000873.2-208ENST00000500634 NESP48681 1621 aa18.38■□□□□ 0.53
AP000873.2-208ENST00000500634 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
AP000873.2-208ENST00000500634 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
AP000873.2-208ENST00000500634 TOP2AP11388 1531 aaKnown RBP18.22■□□□□ 0.51
AP000873.2-208ENST00000500634 CADPSQ9ULU8 1353 aa18.18■□□□□ 0.5
AP000873.2-208ENST00000500634 CUX2O14529 1486 aa18.16■□□□□ 0.5
AP000873.2-208ENST00000500634 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
AP000873.2-208ENST00000500634 KIF21AQ7Z4S6 1674 aa18.11■□□□□ 0.49
AP000873.2-208ENST00000500634 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
AP000873.2-208ENST00000500634 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.49
AP000873.2-208ENST00000500634 CFTRP13569 1480 aa18.04■□□□□ 0.48
AP000873.2-208ENST00000500634 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
AP000873.2-208ENST00000500634 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
AP000873.2-208ENST00000500634 CEP164Q9UPV0 1460 aa18■□□□□ 0.47
AP000873.2-208ENST00000500634 MRC2Q9UBG0 1479 aa17.99■□□□□ 0.47
AP000873.2-208ENST00000500634 WDR62O43379 1518 aa17.92■□□□□ 0.46
AP000873.2-208ENST00000500634 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
AP000873.2-208ENST00000500634 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
AP000873.2-208ENST00000500634 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
AP000873.2-208ENST00000500634 DNAJC5Q9H3Z4 198 aa17.8■□□□□ 0.44
AP000873.2-208ENST00000500634 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
AP000873.2-208ENST00000500634 DNMBPQ6XZF7 1577 aa17.64■□□□□ 0.41
AP000873.2-208ENST00000500634 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
AP000873.2-208ENST00000500634 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
AP000873.2-208ENST00000500634 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
AP000873.2-208ENST00000500634 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
AP000873.2-208ENST00000500634 CUX1P39880 1505 aa17.51■□□□□ 0.39
AP000873.2-208ENST00000500634 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
AP000873.2-208ENST00000500634 RAD54L2Q9Y4B4 1467 aa17.48■□□□□ 0.39
AP000873.2-208ENST00000500634 EIF4G3O43432 1585 aaKnown RBP17.48■□□□□ 0.39
AP000873.2-208ENST00000500634 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
AP000873.2-208ENST00000500634 SOGA1O94964 1423 aa17.46■□□□□ 0.39
AP000873.2-208ENST00000500634 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.383e-7■■□□□ 14
AP000873.2-208ENST00000500634 OSCARQ8IYS5 282 aa17.41■□□□□ 0.38
AP000873.2-208ENST00000500634 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
AP000873.2-208ENST00000500634 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
AP000873.2-208ENST00000500634 FBLN2P98095 1184 aa17.31■□□□□ 0.36
AP000873.2-208ENST00000500634 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
AP000873.2-208ENST00000500634 SYNJ1O43426 1573 aa17.3■□□□□ 0.36
AP000873.2-208ENST00000500634 SNAPC4Q5SXM2 1469 aa17.29■□□□□ 0.36
AP000873.2-208ENST00000500634 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
AP000873.2-208ENST00000500634 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
AP000873.2-208ENST00000500634 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
AP000873.2-208ENST00000500634 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
AP000873.2-208ENST00000500634 CHD1O14646 1710 aa17.26■□□□□ 0.35
AP000873.2-208ENST00000500634 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
AP000873.2-208ENST00000500634 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
AP000873.2-208ENST00000500634 MAGI1Q96QZ7 1491 aaPredicted RBP17.22■□□□□ 0.35
AP000873.2-208ENST00000500634 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
AP000873.2-208ENST00000500634 CHMP7Q8WUX9 453 aaPredicted RBP17.2■□□□□ 0.34
AP000873.2-208ENST00000500634 PBRM1Q86U86 1689 aa17.2■□□□□ 0.34
AP000873.2-208ENST00000500634 SYNJ2O15056 1496 aa17.17■□□□□ 0.34
AP000873.2-208ENST00000500634 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
AP000873.2-208ENST00000500634 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
AP000873.2-208ENST00000500634 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
AP000873.2-208ENST00000500634 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
AP000873.2-208ENST00000500634 ADAMTS12P58397 1594 aa17.07■□□□□ 0.32
AP000873.2-208ENST00000500634 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
AP000873.2-208ENST00000500634 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
AP000873.2-208ENST00000500634 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
AP000873.2-208ENST00000500634 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
AP000873.2-208ENST00000500634 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
AP000873.2-208ENST00000500634 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
AP000873.2-208ENST00000500634 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
AP000873.2-208ENST00000500634 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
AP000873.2-208ENST00000500634 NUP160Q12769 1436 aa16.96■□□□□ 0.31
AP000873.2-208ENST00000500634 IGF1RP08069 1367 aa16.92■□□□□ 0.3
AP000873.2-208ENST00000500634 ERCC6L2Q5T890 1561 aa16.86■□□□□ 0.29
AP000873.2-208ENST00000500634 CUL7Q14999 1698 aa16.86■□□□□ 0.29
AP000873.2-208ENST00000500634 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms