RNA–Protein interactions for RNA: ENST00000437613.1

LSG1-203, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-203ENST00000437613 NISCHQ9Y2I1 1504 aa22.68■■□□□ 1.22
LSG1-203ENST00000437613 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
LSG1-203ENST00000437613 ABCC9O60706 1549 aa19.58■□□□□ 0.73
LSG1-203ENST00000437613 DCAF8L2P0C7V8 631 aa19.07■□□□□ 0.64
LSG1-203ENST00000437613 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
LSG1-203ENST00000437613 NACADO15069 1562 aa18.87■□□□□ 0.61
LSG1-203ENST00000437613 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
LSG1-203ENST00000437613 MYO15BQ96JP2 1530 aa18.77■□□□□ 0.6
LSG1-203ENST00000437613 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
LSG1-203ENST00000437613 PABPN1Q86U42 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
LSG1-203ENST00000437613 UNC13AQ9UPW8 1703 aa18.34■□□□□ 0.53
LSG1-203ENST00000437613 SCRIBQ14160 1630 aa18.33■□□□□ 0.52
LSG1-203ENST00000437613 BICRAQ9NZM4 1560 aa18.25■□□□□ 0.51
LSG1-203ENST00000437613 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
LSG1-203ENST00000437613 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
LSG1-203ENST00000437613 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
LSG1-203ENST00000437613 CC2D2AQ9P2K1 1620 aa17.67■□□□□ 0.42
LSG1-203ENST00000437613 CECR2Q9BXF3 1484 aa17.67■□□□□ 0.42
LSG1-203ENST00000437613 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
LSG1-203ENST00000437613 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
LSG1-203ENST00000437613 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
LSG1-203ENST00000437613 ATAD2BQ9ULI0 1458 aa17.45■□□□□ 0.38
LSG1-203ENST00000437613 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
LSG1-203ENST00000437613 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
LSG1-203ENST00000437613 RSF1Q96T23 1441 aaPredicted RBP17.36■□□□□ 0.37
LSG1-203ENST00000437613 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
LSG1-203ENST00000437613 BAZ1BQ9UIG0 1483 aaKnown RBP17.31■□□□□ 0.36
LSG1-203ENST00000437613 HMGXB3Q12766 1538 aa17.3■□□□□ 0.36
LSG1-203ENST00000437613 WIZO95785 1651 aa17.27■□□□□ 0.36
LSG1-203ENST00000437613 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
LSG1-203ENST00000437613 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
LSG1-203ENST00000437613 NESP48681 1621 aa16.96■□□□□ 0.31
LSG1-203ENST00000437613 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
LSG1-203ENST00000437613 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
LSG1-203ENST00000437613 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
LSG1-203ENST00000437613 ERCC6Q03468 1493 aa16.88■□□□□ 0.29
LSG1-203ENST00000437613 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
LSG1-203ENST00000437613 CFTRP13569 1480 aa16.86■□□□□ 0.29
LSG1-203ENST00000437613 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
LSG1-203ENST00000437613 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
LSG1-203ENST00000437613 CEP164Q9UPV0 1460 aa16.69■□□□□ 0.26
LSG1-203ENST00000437613 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
LSG1-203ENST00000437613 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
LSG1-203ENST00000437613 CUX2O14529 1486 aa16.61■□□□□ 0.25
LSG1-203ENST00000437613 THOC2Q8NI27 1593 aaKnown RBP16.6■□□□□ 0.25
LSG1-203ENST00000437613 WDR62O43379 1518 aa16.55■□□□□ 0.24
LSG1-203ENST00000437613 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
LSG1-203ENST00000437613 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
LSG1-203ENST00000437613 TOPBP1Q92547 1522 aa16.47■□□□□ 0.23
LSG1-203ENST00000437613 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
LSG1-203ENST00000437613 CUX1P39880 1505 aa16.38■□□□□ 0.21
LSG1-203ENST00000437613 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
LSG1-203ENST00000437613 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
LSG1-203ENST00000437613 POLA1P09884 1462 aaPredicted RBP16.34■□□□□ 0.21
LSG1-203ENST00000437613 SOGA1O94964 1423 aa16.33■□□□□ 0.2
LSG1-203ENST00000437613 FGD5Q6ZNL6 1462 aa16.32■□□□□ 0.2
LSG1-203ENST00000437613 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
LSG1-203ENST00000437613 ZNF608Q9ULD9 1512 aaPredicted RBP16.26■□□□□ 0.19
LSG1-203ENST00000437613 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
LSG1-203ENST00000437613 SYNJ1O43426 1573 aa16.26■□□□□ 0.19
LSG1-203ENST00000437613 TARBP1Q13395 1621 aaKnown RBP16.24■□□□□ 0.19
LSG1-203ENST00000437613 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
LSG1-203ENST00000437613 BIVM-ERCC5R4GMW8 1640 aa16.23■□□□□ 0.19
LSG1-203ENST00000437613 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.19
LSG1-203ENST00000437613 ABCA10Q8WWZ4 1543 aa16.16■□□□□ 0.18
LSG1-203ENST00000437613 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
LSG1-203ENST00000437613 EIF4G3O43432 1585 aaKnown RBP16.14■□□□□ 0.17
LSG1-203ENST00000437613 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
LSG1-203ENST00000437613 WDR97A6NE52 1622 aa16.11■□□□□ 0.17
LSG1-203ENST00000437613 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
LSG1-203ENST00000437613 FBLN2P98095 1184 aa16.08■□□□□ 0.16
LSG1-203ENST00000437613 OSCARQ8IYS5 282 aa16.07■□□□□ 0.16
LSG1-203ENST00000437613 DNAJC5Q9H3Z4 198 aa16.06■□□□□ 0.16
LSG1-203ENST00000437613 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
LSG1-203ENST00000437613 ABCA5Q8WWZ7 1642 aa16.04■□□□□ 0.16
LSG1-203ENST00000437613 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
LSG1-203ENST00000437613 SNAPC4Q5SXM2 1469 aa16.03■□□□□ 0.16
LSG1-203ENST00000437613 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
LSG1-203ENST00000437613 MAGI1Q96QZ7 1491 aaPredicted RBP16.01■□□□□ 0.15
LSG1-203ENST00000437613 PBRM1Q86U86 1689 aa15.98■□□□□ 0.15
LSG1-203ENST00000437613 IGF1RP08069 1367 aa15.97■□□□□ 0.15
LSG1-203ENST00000437613 ERICH3Q5RHP9 1530 aa15.96■□□□□ 0.15
LSG1-203ENST00000437613 SYNJ2O15056 1496 aa15.96■□□□□ 0.14
LSG1-203ENST00000437613 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
LSG1-203ENST00000437613 RUSC2Q8N2Y8 1516 aa15.9■□□□□ 0.14
LSG1-203ENST00000437613 CHD1O14646 1710 aa15.9■□□□□ 0.14
LSG1-203ENST00000437613 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
LSG1-203ENST00000437613 ADAMTS12P58397 1594 aa15.87■□□□□ 0.13
LSG1-203ENST00000437613 GRIN2AQ12879 1464 aa15.86■□□□□ 0.13
LSG1-203ENST00000437613 FAM9AQ8IZU1 332 aaPredicted RBP15.83■□□□□ 0.12
LSG1-203ENST00000437613 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
LSG1-203ENST00000437613 CUL7Q14999 1698 aa15.81■□□□□ 0.12
LSG1-203ENST00000437613 NUP160Q12769 1436 aa15.78■□□□□ 0.12
LSG1-203ENST00000437613 EEA1Q15075 1411 aa15.78■□□□□ 0.12
LSG1-203ENST00000437613 RAPGEF2Q9Y4G8 1499 aa15.76■□□□□ 0.11
LSG1-203ENST00000437613 CEP170Q5SW79 1584 aa15.75■□□□□ 0.11
LSG1-203ENST00000437613 CLASP1Q7Z460 1538 aa15.75■□□□□ 0.11
LSG1-203ENST00000437613 JPH4Q96JJ6 628 aa15.73■□□□□ 0.11
LSG1-203ENST00000437613 PRXQ9BXM0 1461 aa15.72■□□□□ 0.11
LSG1-203ENST00000437613 ARHGEF11O15085 1522 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 290.2 ms