RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
NUDCD3-210ENST00000493613 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
NUDCD3-210ENST00000493613 ABCC9O60706 1549 aa23.18■■□□□ 1.3
NUDCD3-210ENST00000493613 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
NUDCD3-210ENST00000493613 NACADO15069 1562 aa21.95■■□□□ 1.11
NUDCD3-210ENST00000493613 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
NUDCD3-210ENST00000493613 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
NUDCD3-210ENST00000493613 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
NUDCD3-210ENST00000493613 MYO15BQ96JP2 1530 aa21.62■■□□□ 1.05
NUDCD3-210ENST00000493613 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
NUDCD3-210ENST00000493613 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
NUDCD3-210ENST00000493613 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
NUDCD3-210ENST00000493613 DCAF1Q9Y4B6 1507 aa21.35■■□□□ 1.01
NUDCD3-210ENST00000493613 SCRIBQ14160 1630 aa21.19■□□□□ 0.98
NUDCD3-210ENST00000493613 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
NUDCD3-210ENST00000493613 CC2D2AQ9P2K1 1620 aa21■□□□□ 0.95
NUDCD3-210ENST00000493613 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
NUDCD3-210ENST00000493613 CECR2Q9BXF3 1484 aa20.87■□□□□ 0.93
NUDCD3-210ENST00000493613 SMARCA4P51532 1647 aa20.22■□□□□ 0.83
NUDCD3-210ENST00000493613 NCAPD3P42695 1498 aa20.2■□□□□ 0.82
NUDCD3-210ENST00000493613 ATAD2BQ9ULI0 1458 aa20.15■□□□□ 0.82
NUDCD3-210ENST00000493613 SMARCA2P51531 1590 aa20.15■□□□□ 0.82
NUDCD3-210ENST00000493613 HMGXB3Q12766 1538 aa20.12■□□□□ 0.81
NUDCD3-210ENST00000493613 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.81
NUDCD3-210ENST00000493613 ERCC6Q03468 1493 aa20.02■□□□□ 0.8
NUDCD3-210ENST00000493613 PEG3Q9GZU2 1588 aa20■□□□□ 0.79
NUDCD3-210ENST00000493613 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
NUDCD3-210ENST00000493613 CUX2O14529 1486 aa19.99■□□□□ 0.79
NUDCD3-210ENST00000493613 NESP48681 1621 aa19.92■□□□□ 0.78
NUDCD3-210ENST00000493613 MROH2BQ7Z745 1585 aa19.91■□□□□ 0.78
NUDCD3-210ENST00000493613 DNAJC5Q9H3Z4 198 aa19.89■□□□□ 0.77
NUDCD3-210ENST00000493613 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
NUDCD3-210ENST00000493613 KIF21AQ7Z4S6 1674 aa19.8■□□□□ 0.76
NUDCD3-210ENST00000493613 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
NUDCD3-210ENST00000493613 WIZO95785 1651 aa19.75■□□□□ 0.75
NUDCD3-210ENST00000493613 PDS5BQ9NTI5 1447 aa19.64■□□□□ 0.73
NUDCD3-210ENST00000493613 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
NUDCD3-210ENST00000493613 MRC2Q9UBG0 1479 aa19.49■□□□□ 0.71
NUDCD3-210ENST00000493613 WDR62O43379 1518 aa19.48■□□□□ 0.71
NUDCD3-210ENST00000493613 RSF1Q96T23 1441 aaPredicted RBP19.46■□□□□ 0.71
NUDCD3-210ENST00000493613 TOP2AP11388 1531 aaKnown RBP19.45■□□□□ 0.7
NUDCD3-210ENST00000493613 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
NUDCD3-210ENST00000493613 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
NUDCD3-210ENST00000493613 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
NUDCD3-210ENST00000493613 CFTRP13569 1480 aa19.38■□□□□ 0.69
NUDCD3-210ENST00000493613 URB2Q14146 1524 aaKnown RBP19.25■□□□□ 0.67
NUDCD3-210ENST00000493613 CCDC88BA6NC98 1476 aa19.19■□□□□ 0.66
NUDCD3-210ENST00000493613 TRIM41Q8WV44 630 aa19.04■□□□□ 0.64
NUDCD3-210ENST00000493613 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
NUDCD3-210ENST00000493613 IFT140Q96RY7 1462 aa19.02■□□□□ 0.63
NUDCD3-210ENST00000493613 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
NUDCD3-210ENST00000493613 OSCARQ8IYS5 282 aa19■□□□□ 0.63
NUDCD3-210ENST00000493613 ABCC8Q09428 1581 aa19■□□□□ 0.63
NUDCD3-210ENST00000493613 ZNF608Q9ULD9 1512 aaPredicted RBP18.99■□□□□ 0.63
NUDCD3-210ENST00000493613 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
NUDCD3-210ENST00000493613 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
NUDCD3-210ENST00000493613 CHD1O14646 1710 aa18.9■□□□□ 0.62
NUDCD3-210ENST00000493613 RIMBP3CA6NJZ7 1639 aa18.89■□□□□ 0.62
NUDCD3-210ENST00000493613 RIMBP3BA6NNM3 1639 aa18.89■□□□□ 0.62
NUDCD3-210ENST00000493613 RIMBP3Q9UFD9 1639 aa18.89■□□□□ 0.62
NUDCD3-210ENST00000493613 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
NUDCD3-210ENST00000493613 AQRO60306 1485 aaKnown RBP eCLIP18.8■□□□□ 0.6
NUDCD3-210ENST00000493613 ARHGEF11O15085 1522 aa18.78■□□□□ 0.6
NUDCD3-210ENST00000493613 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
NUDCD3-210ENST00000493613 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
NUDCD3-210ENST00000493613 FGD5Q6ZNL6 1462 aa18.73■□□□□ 0.59
NUDCD3-210ENST00000493613 CUX1P39880 1505 aa18.72■□□□□ 0.59
NUDCD3-210ENST00000493613 SOGA1O94964 1423 aa18.72■□□□□ 0.59
NUDCD3-210ENST00000493613 TDRD9Q8NDG6 1382 aaKnown RBP18.67■□□□□ 0.58
NUDCD3-210ENST00000493613 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
NUDCD3-210ENST00000493613 FBLN2P98095 1184 aa18.66■□□□□ 0.58
NUDCD3-210ENST00000493613 SNAPC4Q5SXM2 1469 aa18.64■□□□□ 0.57
NUDCD3-210ENST00000493613 MAGI1Q96QZ7 1491 aaPredicted RBP18.59■□□□□ 0.57
NUDCD3-210ENST00000493613 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
NUDCD3-210ENST00000493613 CLASP1Q7Z460 1538 aa18.58■□□□□ 0.56
NUDCD3-210ENST00000493613 GRIN2BQ13224 1484 aa18.58■□□□□ 0.56
NUDCD3-210ENST00000493613 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
NUDCD3-210ENST00000493613 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
NUDCD3-210ENST00000493613 CYB5RLQ6IPT4 315 aa18.56■□□□□ 0.56
NUDCD3-210ENST00000493613 ABCA5Q8WWZ7 1642 aa18.55■□□□□ 0.56
NUDCD3-210ENST00000493613 SYNJ2O15056 1496 aa18.53■□□□□ 0.56
NUDCD3-210ENST00000493613 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.56
NUDCD3-210ENST00000493613 CHMP7Q8WUX9 453 aaPredicted RBP18.51■□□□□ 0.55
NUDCD3-210ENST00000493613 BIVM-ERCC5R4GMW8 1640 aa18.51■□□□□ 0.55
NUDCD3-210ENST00000493613 ABCA10Q8WWZ4 1543 aa18.5■□□□□ 0.55
NUDCD3-210ENST00000493613 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
NUDCD3-210ENST00000493613 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
NUDCD3-210ENST00000493613 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
NUDCD3-210ENST00000493613 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
NUDCD3-210ENST00000493613 GRIN2AQ12879 1464 aa18.36■□□□□ 0.53
NUDCD3-210ENST00000493613 CEP170Q5SW79 1584 aa18.33■□□□□ 0.52
NUDCD3-210ENST00000493613 ERICH3Q5RHP9 1530 aa18.3■□□□□ 0.52
NUDCD3-210ENST00000493613 SHROOM2Q13796 1616 aa18.28■□□□□ 0.52
NUDCD3-210ENST00000493613 ERCC6L2Q5T890 1561 aa18.28■□□□□ 0.52
NUDCD3-210ENST00000493613 FHAD1B1AJZ9 1412 aa18.26■□□□□ 0.51
NUDCD3-210ENST00000493613 NUP160Q12769 1436 aa18.26■□□□□ 0.51
NUDCD3-210ENST00000493613 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
NUDCD3-210ENST00000493613 CUL7Q14999 1698 aa18.11■□□□□ 0.49
NUDCD3-210ENST00000493613 KIF13AQ9H1H9 1805 aa18.1■□□□□ 0.49
NUDCD3-210ENST00000493613 PRG4Q92954 1404 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms