RNA–Protein interactions for RNA: ENST00000609154.1

CRLS1-207, Transcript of cardiolipin synthase 1, humanhuman

TSL 1 (best)

Gene CRLS1, Length 977 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLS1-207ENST00000609154 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
CRLS1-207ENST00000609154 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
CRLS1-207ENST00000609154 SENP3Q9H4L4 574 aaPredicted RBP22.83■■□□□ 1.25
CRLS1-207ENST00000609154 PHF23Q9BUL5 403 aaPredicted RBP22.42■■□□□ 1.18
CRLS1-207ENST00000609154 FOXD1Q16676 465 aa21.36■■□□□ 1.01
CRLS1-207ENST00000609154 POTEDQ86YR6 584 aa21.23■□□□□ 0.99
CRLS1-207ENST00000609154 MSH5O43196 834 aa20.34■□□□□ 0.85
CRLS1-207ENST00000609154 PIAS4Q8N2W9 510 aaPredicted RBP19.81■□□□□ 0.76
CRLS1-207ENST00000609154 PPP6R1Q9UPN7 881 aa19.33■□□□□ 0.68
CRLS1-207ENST00000609154 ADRA2BP18089 450 aa19.26■□□□□ 0.67
CRLS1-207ENST00000609154 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
CRLS1-207ENST00000609154 CACNB1Q02641 598 aaPredicted RBP18.01■□□□□ 0.47
CRLS1-207ENST00000609154 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
CRLS1-207ENST00000609154 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
CRLS1-207ENST00000609154 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
CRLS1-207ENST00000609154 DCAF8L1A6NGE4 600 aa17.4■□□□□ 0.38
CRLS1-207ENST00000609154 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
CRLS1-207ENST00000609154 C1QBPQ07021 282 aaKnown RBP16.96■□□□□ 0.31
CRLS1-207ENST00000609154 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
CRLS1-207ENST00000609154 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
CRLS1-207ENST00000609154 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
CRLS1-207ENST00000609154 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
CRLS1-207ENST00000609154 POTEHQ6S545 545 aa16.5■□□□□ 0.23
CRLS1-207ENST00000609154 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
CRLS1-207ENST00000609154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
CRLS1-207ENST00000609154 DSG3P32926 999 aa15.89■□□□□ 0.13
CRLS1-207ENST00000609154 CAPN15O75808 1086 aa15.87■□□□□ 0.13
CRLS1-207ENST00000609154 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
CRLS1-207ENST00000609154 SPINK5Q9NQ38 1064 aaPredicted RBP15.78■□□□□ 0.12
CRLS1-207ENST00000609154 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
CRLS1-207ENST00000609154 NPM3O75607 178 aaKnown RBP15.57■□□□□ 0.08
CRLS1-207ENST00000609154 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
CRLS1-207ENST00000609154 ABCB7O75027 752 aa15.4■□□□□ 0.06
CRLS1-207ENST00000609154 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
CRLS1-207ENST00000609154 APLP2Q06481 763 aa15.29■□□□□ 0.04
CRLS1-207ENST00000609154 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.03
CRLS1-207ENST00000609154 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
CRLS1-207ENST00000609154 SP7Q8TDD2 431 aaPredicted RBP15.08■□□□□ 0
CRLS1-207ENST00000609154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
CRLS1-207ENST00000609154 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
CRLS1-207ENST00000609154 SLC4A2P04920 1241 aa15.05■□□□□ -0
CRLS1-207ENST00000609154 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
CRLS1-207ENST00000609154 POLA2Q14181 598 aa14.79□□□□□ -0.04
CRLS1-207ENST00000609154 HAX1O00165 279 aa14.69□□□□□ -0.06
CRLS1-207ENST00000609154 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
CRLS1-207ENST00000609154 PIP4P2Q8N4L2 257 aa14.64□□□□□ -0.07
CRLS1-207ENST00000609154 KCNA4P22459 653 aa14.55□□□□□ -0.08
CRLS1-207ENST00000609154 REM2Q8IYK8 340 aaPredicted RBP14.53□□□□□ -0.08
CRLS1-207ENST00000609154 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
CRLS1-207ENST00000609154 FXR2P51116 673 aaKnown RBP eCLIP14.4□□□□□ -0.1
CRLS1-207ENST00000609154 ZBTB12Q9Y330 459 aaPredicted RBP14.4□□□□□ -0.1
CRLS1-207ENST00000609154 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
CRLS1-207ENST00000609154 EVX2Q03828 476 aa14.35□□□□□ -0.11
CRLS1-207ENST00000609154 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
CRLS1-207ENST00000609154 ATF5Q9Y2D1 282 aaPredicted RBP14.16□□□□□ -0.14
CRLS1-207ENST00000609154 LHX8Q68G74 356 aa14.15□□□□□ -0.14
CRLS1-207ENST00000609154 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
CRLS1-207ENST00000609154 PLSCR2Q9NRY7 297 aa14.02□□□□□ -0.17
CRLS1-207ENST00000609154 GABBR2O75899 941 aa14□□□□□ -0.17
CRLS1-207ENST00000609154 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
CRLS1-207ENST00000609154 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
CRLS1-207ENST00000609154 SPDYE2BA6NHP3 402 aa13.87□□□□□ -0.19
CRLS1-207ENST00000609154 SPDYE6P0CI01 402 aa13.87□□□□□ -0.19
CRLS1-207ENST00000609154 SPDYE2Q495Y8 402 aa13.87□□□□□ -0.19
CRLS1-207ENST00000609154 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
CRLS1-207ENST00000609154 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
CRLS1-207ENST00000609154 FBLN2P98095 1184 aa13.73□□□□□ -0.21
CRLS1-207ENST00000609154 CHADLQ6NUI6 762 aa13.71□□□□□ -0.21
CRLS1-207ENST00000609154 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
CRLS1-207ENST00000609154 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
CRLS1-207ENST00000609154 SLC4A1APQ9BWU0 796 aaKnown RBP13.6□□□□□ -0.23
CRLS1-207ENST00000609154 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
CRLS1-207ENST00000609154 CD44P16070 742 aaKnown RBP13.56□□□□□ -0.24
CRLS1-207ENST00000609154 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
CRLS1-207ENST00000609154 DCBLD2Q96PD2 775 aa13.52□□□□□ -0.25
CRLS1-207ENST00000609154 CLCN6P51797 869 aa13.51□□□□□ -0.25
CRLS1-207ENST00000609154 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
CRLS1-207ENST00000609154 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
CRLS1-207ENST00000609154 FARP1Q9Y4F1 1045 aaPredicted RBP13.4□□□□□ -0.26
CRLS1-207ENST00000609154 POTEMA6NI47 508 aa13.38□□□□□ -0.27
CRLS1-207ENST00000609154 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
CRLS1-207ENST00000609154 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
CRLS1-207ENST00000609154 ZBTB22O15209 634 aa13.31□□□□□ -0.28
CRLS1-207ENST00000609154 POTEGQ6S5H5 508 aa13.3□□□□□ -0.28
CRLS1-207ENST00000609154 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
CRLS1-207ENST00000609154 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
CRLS1-207ENST00000609154 POTEB2H3BUK9 544 aa13.21□□□□□ -0.29
CRLS1-207ENST00000609154 PCDH10Q9P2E7 1040 aa13.19□□□□□ -0.3
CRLS1-207ENST00000609154 GALR2O43603 387 aaPredicted RBP13.17□□□□□ -0.3
CRLS1-207ENST00000609154 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
CRLS1-207ENST00000609154 PELP1Q8IZL8 1130 aaKnown RBP12.97□□□□□ -0.33
CRLS1-207ENST00000609154 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
CRLS1-207ENST00000609154 PHF12Q96QT6 1004 aa12.95□□□□□ -0.34
CRLS1-207ENST00000609154 FAM163AQ96GL9 167 aaPredicted RBP12.94□□□□□ -0.34
CRLS1-207ENST00000609154 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
CRLS1-207ENST00000609154 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
CRLS1-207ENST00000609154 POTEJP0CG39 1038 aa12.86□□□□□ -0.35
CRLS1-207ENST00000609154 C7P10643 843 aa12.86□□□□□ -0.35
CRLS1-207ENST00000609154 SLC39A7Q92504 469 aa12.86□□□□□ -0.35
CRLS1-207ENST00000609154 LCE2DQ5TA82 110 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms