Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOX6P35712 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SOX6P35712 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOX6P35712 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SOX6P35712 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOX6P35712 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SOX6P35712 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.81■□□□□ 0.92
SOX6P35712 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOX6P35712 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOX6P35712 AC233723.2-201ENST00000623798 2106 ntBASIC20.81■□□□□ 0.92
SOX6P35712 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SOX6P35712 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SOX6P35712 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX6P35712 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX6P35712 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SOX6P35712 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.8■□□□□ 0.92
SOX6P35712 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SOX6P35712 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SOX6P35712 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SOX6P35712 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.8■□□□□ 0.92
SOX6P35712 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SOX6P35712 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX6P35712 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SOX6P35712 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SOX6P35712 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX6P35712 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX6P35712 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SOX6P35712 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX6P35712 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SOX6P35712 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX6P35712 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX6P35712 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX6P35712 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOX6P35712 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOX6P35712 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX6P35712 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
SOX6P35712 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SOX6P35712 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX6P35712 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SOX6P35712 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.77■□□□□ 0.92
SOX6P35712 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX6P35712 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.77■□□□□ 0.92
SOX6P35712 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SOX6P35712 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX6P35712 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX6P35712 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX6P35712 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.76■□□□□ 0.91
SOX6P35712 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX6P35712 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX6P35712 EP400NL-214ENST00000641289 2402 ntBASIC20.76■□□□□ 0.91
SOX6P35712 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.76■□□□□ 0.91
SOX6P35712 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SOX6P35712 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX6P35712 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SOX6P35712 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX6P35712 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX6P35712 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SOX6P35712 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SOX6P35712 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SOX6P35712 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX6P35712 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.75■□□□□ 0.91
SOX6P35712 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOX6P35712 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.75■□□□□ 0.91
SOX6P35712 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SOX6P35712 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOX6P35712 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.75■□□□□ 0.91
SOX6P35712 MIR6090-201ENST00000622481 60 ntBASIC20.75■□□□□ 0.91
SOX6P35712 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SOX6P35712 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SOX6P35712 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOX6P35712 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOX6P35712 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOX6P35712 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOX6P35712 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.74■□□□□ 0.91
SOX6P35712 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.74■□□□□ 0.91
SOX6P35712 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOX6P35712 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.74■□□□□ 0.91
SOX6P35712 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOX6P35712 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SOX6P35712 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SOX6P35712 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SOX6P35712 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SOX6P35712 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SOX6P35712 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX6P35712 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX6P35712 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX6P35712 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.73■□□□□ 0.91
SOX6P35712 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SOX6P35712 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SOX6P35712 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX6P35712 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SOX6P35712 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SOX6P35712 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.73■□□□□ 0.91
SOX6P35712 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX6P35712 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX6P35712 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SOX6P35712 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.72■□□□□ 0.91
SOX6P35712 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.72■□□□□ 0.91
SOX6P35712 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SOX6P35712 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms