RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 NISCHQ9Y2I1 1504 aa52.39■■■■■ 5.98
CDH23-206ENST00000398842 CCDC180Q9P1Z9 1646 aa45.63■■■■■ 4.9
CDH23-206ENST00000398842 ZCCHC6Q5VYS8 1495 aaKnown RBP44.05■■■■■ 4.64
CDH23-206ENST00000398842 ABCC9O60706 1549 aa43.36■■■■■ 4.53
CDH23-206ENST00000398842 DCAF1Q9Y4B6 1507 aa43.33■■■■■ 4.53
CDH23-206ENST00000398842 DCAF8L2P0C7V8 631 aa43.12■■■■■ 4.49
CDH23-206ENST00000398842 SHROOM4Q9ULL8 1493 aa42.79■■■■■ 4.44
CDH23-206ENST00000398842 MYO15BQ96JP2 1530 aa42.77■■■■■ 4.44
CDH23-206ENST00000398842 NACADO15069 1562 aa42.44■■■■■ 4.38
CDH23-206ENST00000398842 RB1CC1Q8TDY2 1594 aa42.04■■■■■ 4.32
CDH23-206ENST00000398842 SCRIBQ14160 1630 aa41.97■■■■■ 4.31
CDH23-206ENST00000398842 UNC13AQ9UPW8 1703 aa41.29■■■■■ 4.2
CDH23-206ENST00000398842 SUPT5HO00267 1087 aaKnown RBP41.22■■■■■ 4.19
CDH23-206ENST00000398842 BICRAQ9NZM4 1560 aa40.83■■■■■ 4.13
CDH23-206ENST00000398842 PABPN1Q86U42 306 aaKnown RBP eCLIP40.79■■■■■ 4.12
CDH23-206ENST00000398842 CECR2Q9BXF3 1484 aa40.71■■■■■ 4.11
CDH23-206ENST00000398842 RSF1Q96T23 1441 aaPredicted RBP40.7■■■■■ 4.11
CDH23-206ENST00000398842 MROH2BQ7Z745 1585 aa40.49■■■■■ 4.07
CDH23-206ENST00000398842 BAZ1AQ9NRL2 1556 aaPredicted RBP40.43■■■■■ 4.06
CDH23-206ENST00000398842 SMARCA4P51532 1647 aa40.26■■■■■ 4.04
CDH23-206ENST00000398842 WIZO95785 1651 aa40.18■■■■■ 4.02
CDH23-206ENST00000398842 PEG3Q9GZU2 1588 aa39.77■■■■□ 3.96
CDH23-206ENST00000398842 TOP2AP11388 1531 aaKnown RBP39.74■■■■□ 3.95
CDH23-206ENST00000398842 CHIC1Q5VXU3 224 aa39.59■■■■□ 3.93
CDH23-206ENST00000398842 EIF4G1Q04637 1599 aaKnown RBP39.58■■■■□ 3.93
CDH23-206ENST00000398842 ATAD2BQ9ULI0 1458 aa39.54■■■■□ 3.92
CDH23-206ENST00000398842 SMARCA2P51531 1590 aa39.51■■■■□ 3.91
CDH23-206ENST00000398842 CCDC88BA6NC98 1476 aa39.35■■■■□ 3.89
CDH23-206ENST00000398842 BAZ1BQ9UIG0 1483 aaKnown RBP39.3■■■■□ 3.88
CDH23-206ENST00000398842 CC2D2AQ9P2K1 1620 aa39.19■■■■□ 3.86
CDH23-206ENST00000398842 NCAPD3P42695 1498 aa39.17■■■■□ 3.86
CDH23-206ENST00000398842 HMGXB3Q12766 1538 aa39.14■■■■□ 3.86
CDH23-206ENST00000398842 DNAJC5BQ9UF47 199 aa38.9■■■■□ 3.82
CDH23-206ENST00000398842 TRIM41Q8WV44 630 aa38.75■■■■□ 3.79
CDH23-206ENST00000398842 ABCC8Q09428 1581 aa38.56■■■■□ 3.76
CDH23-206ENST00000398842 CFTRP13569 1480 aa38.35■■■■□ 3.73
CDH23-206ENST00000398842 WRNQ14191 1432 aaPredicted RBP eCLIP38.28■■■■□ 3.72
CDH23-206ENST00000398842 PRDM2Q13029 1718 aa38.22■■■■□ 3.71
CDH23-206ENST00000398842 CADPSQ9ULU8 1353 aa38.17■■■■□ 3.7
CDH23-206ENST00000398842 SYNJ1O43426 1573 aa38.16■■■■□ 3.7
CDH23-206ENST00000398842 LOC105371045A0A1W2PR82 267 aa38.06■■■■□ 3.68
CDH23-206ENST00000398842 FAM9AQ8IZU1 332 aaPredicted RBP38.04■■■■□ 3.68
CDH23-206ENST00000398842 TOP2BQ02880 1626 aa37.99■■■■□ 3.67
CDH23-206ENST00000398842 BIVM-ERCC5R4GMW8 1640 aa37.96■■■■□ 3.67
CDH23-206ENST00000398842 SOGA1O94964 1423 aa37.86■■■■□ 3.65
CDH23-206ENST00000398842 CUX1P39880 1505 aa37.85■■■■□ 3.65
CDH23-206ENST00000398842 NESP48681 1621 aa37.85■■■■□ 3.65
CDH23-206ENST00000398842 LAMC3Q9Y6N6 1575 aa37.82■■■■□ 3.64
CDH23-206ENST00000398842 EEA1Q15075 1411 aa37.8■■■■□ 3.64
CDH23-206ENST00000398842 FANCD2Q9BXW9 1451 aa37.75■■■■□ 3.63
CDH23-206ENST00000398842 RUSC2Q8N2Y8 1516 aa37.73■■■■□ 3.63
CDH23-206ENST00000398842 CSRNP3Q8WYN3 585 aa37.57■■■■□ 3.6
CDH23-206ENST00000398842 PDS5BQ9NTI5 1447 aa37.49■■■■□ 3.59
CDH23-206ENST00000398842 CEP164Q9UPV0 1460 aa37.48■■■■□ 3.59
CDH23-206ENST00000398842 EHMT2Q96KQ7 1210 aa37.48■■■■□ 3.59
CDH23-206ENST00000398842 DNMBPQ6XZF7 1577 aa37.45■■■■□ 3.59
CDH23-206ENST00000398842 FGD5Q6ZNL6 1462 aa37.4■■■■□ 3.58
CDH23-206ENST00000398842 KIF21AQ7Z4S6 1674 aa37.38■■■■□ 3.57
CDH23-206ENST00000398842 TOPBP1Q92547 1522 aa37.37■■■■□ 3.57
CDH23-206ENST00000398842 KIF21BO75037 1637 aa37.34■■■■□ 3.57
CDH23-206ENST00000398842 URB2Q14146 1524 aaKnown RBP37.29■■■■□ 3.56
CDH23-206ENST00000398842 GOLGA3Q08378 1498 aa37.29■■■■□ 3.56
CDH23-206ENST00000398842 KIF27Q86VH2 1401 aa37.28■■■■□ 3.56
CDH23-206ENST00000398842 ERCC6Q03468 1493 aa37.24■■■■□ 3.55
CDH23-206ENST00000398842 TNIKQ9UKE5 1360 aa37.21■■■■□ 3.55
CDH23-206ENST00000398842 POLA1P09884 1462 aaPredicted RBP37.2■■■■□ 3.55
CDH23-206ENST00000398842 CUX2O14529 1486 aa37.16■■■■□ 3.54
CDH23-206ENST00000398842 PRXQ9BXM0 1461 aa37.11■■■■□ 3.53
CDH23-206ENST00000398842 RAPGEF2Q9Y4G8 1499 aa37.09■■■■□ 3.53
CDH23-206ENST00000398842 ABCA10Q8WWZ4 1543 aa37.08■■■■□ 3.53
CDH23-206ENST00000398842 RAD54L2Q9Y4B4 1467 aa37.07■■■■□ 3.53
CDH23-206ENST00000398842 UBTFP17480 764 aaKnown RBP37.06■■■■□ 3.52
CDH23-206ENST00000398842 ERICH3Q5RHP9 1530 aa37.05■■■■□ 3.52
CDH23-206ENST00000398842 MRC2Q9UBG0 1479 aa37.03■■■■□ 3.52
CDH23-206ENST00000398842 CEP162Q5TB80 1403 aa37.01■■■■□ 3.52
CDH23-206ENST00000398842 WDR97A6NE52 1622 aa36.99■■■■□ 3.51
CDH23-206ENST00000398842 IGF1RP08069 1367 aa36.97■■■■□ 3.51
CDH23-206ENST00000398842 THOC2Q8NI27 1593 aaKnown RBP36.9■■■■□ 3.5
CDH23-206ENST00000398842 WDR62O43379 1518 aa36.84■■■■□ 3.49
CDH23-206ENST00000398842 TARBP1Q13395 1621 aaKnown RBP36.83■■■■□ 3.49
CDH23-206ENST00000398842 ABCA5Q8WWZ7 1642 aa36.79■■■■□ 3.48
CDH23-206ENST00000398842 CARMIL1Q5VZK9 1371 aa36.77■■■■□ 3.48
CDH23-206ENST00000398842 CLIP1P30622 1438 aa36.69■■■■□ 3.46
CDH23-206ENST00000398842 CUL7Q14999 1698 aa36.68■■■■□ 3.46
CDH23-206ENST00000398842 TDRD9Q8NDG6 1382 aaKnown RBP36.68■■■■□ 3.46
CDH23-206ENST00000398842 GAPVD1Q14C86 1478 aa36.66■■■■□ 3.46
CDH23-206ENST00000398842 IFT140Q96RY7 1462 aa36.58■■■■□ 3.45
CDH23-206ENST00000398842 PBRM1Q86U86 1689 aa36.49■■■■□ 3.43
CDH23-206ENST00000398842 AQRO60306 1485 aaKnown RBP eCLIP36.44■■■■□ 3.42
CDH23-206ENST00000398842 PCGF6Q9BYE7 350 aa36.43■■■■□ 3.42
CDH23-206ENST00000398842 TRIM26Q12899 539 aaPredicted RBP36.42■■■■□ 3.42
CDH23-206ENST00000398842 RANGAP1P46060 587 aaPredicted RBP36.41■■■■□ 3.42
CDH23-206ENST00000398842 VPS8Q8N3P4 1428 aa36.4■■■■□ 3.42
CDH23-206ENST00000398842 ZNF608Q9ULD9 1512 aaPredicted RBP36.4■■■■□ 3.42
CDH23-206ENST00000398842 ARAP1Q96P48 1450 aa36.35■■■■□ 3.41
CDH23-206ENST00000398842 GRIN2BQ13224 1484 aa36.35■■■■□ 3.41
CDH23-206ENST00000398842 CTTNBP2Q8WZ74 1663 aa36.32■■■■□ 3.41
CDH23-206ENST00000398842 ARHGAP35Q9NRY4 1499 aa36.32■■■■□ 3.4
CDH23-206ENST00000398842 EIF4G3O43432 1585 aaKnown RBP36.29■■■■□ 3.4
CDH23-206ENST00000398842 ADAMTS12P58397 1594 aa36.28■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms