RNA–Protein interactions for RNA: ENST00000356713.4

CNNM1-201, Transcript of cyclin and CBS domain divalent metal cation transport mediator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNNM1, Length 5,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM1-201ENST00000356713 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
CNNM1-201ENST00000356713 SUPT5HO00267 1087 aaKnown RBP32.86■■■□□ 2.85
CNNM1-201ENST00000356713 EHMT2Q96KQ7 1210 aa32.52■■■□□ 2.8
CNNM1-201ENST00000356713 SHROOM4Q9ULL8 1493 aa32.12■■■□□ 2.73
CNNM1-201ENST00000356713 PELP1Q8IZL8 1130 aaKnown RBP31.99■■■□□ 2.71
CNNM1-201ENST00000356713 APLP2Q06481 763 aa31.65■■■□□ 2.66
CNNM1-201ENST00000356713 TTBK1Q5TCY1 1321 aaPredicted RBP31.42■■■□□ 2.62
CNNM1-201ENST00000356713 FAM9AQ8IZU1 332 aaPredicted RBP31.23■■■□□ 2.59
CNNM1-201ENST00000356713 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.58
CNNM1-201ENST00000356713 RANGAP1P46060 587 aaPredicted RBP31.01■■■□□ 2.55
CNNM1-201ENST00000356713 ERICH6Q7L0X2 663 aa30.97■■■□□ 2.55
CNNM1-201ENST00000356713 PCGF6Q9BYE7 350 aa30.89■■■□□ 2.53
CNNM1-201ENST00000356713 ATP1B4Q9UN42 357 aaPredicted RBP30.77■■■□□ 2.52
CNNM1-201ENST00000356713 CCER1Q8TC90 406 aaPredicted RBP30.6■■■□□ 2.49
CNNM1-201ENST00000356713 CENPBP07199 599 aaPredicted RBP30.53■■■□□ 2.48
CNNM1-201ENST00000356713 TRIM41Q8WV44 630 aa30.25■■■□□ 2.43
CNNM1-201ENST00000356713 YTHDC1Q96MU7 727 aaKnown RBP30.22■■■□□ 2.43
CNNM1-201ENST00000356713 UBTFP17480 764 aaKnown RBP30.18■■■□□ 2.42
CNNM1-201ENST00000356713 ZEB1P37275 1124 aaPredicted RBP30.17■■■□□ 2.42
CNNM1-201ENST00000356713 NEFLP07196 543 aa30.16■■■□□ 2.42
CNNM1-201ENST00000356713 PPARGC1BQ86YN6 1023 aaKnown RBP29.87■■■□□ 2.37
CNNM1-201ENST00000356713 MYT1LQ9UL68 1186 aa29.76■■■□□ 2.35
CNNM1-201ENST00000356713 POLR3GLQ9BT43 218 aa29.7■■■□□ 2.35
CNNM1-201ENST00000356713 MYT1Q01538 1121 aa29.63■■■□□ 2.33
CNNM1-201ENST00000356713 DAXXQ9UER7 740 aaPredicted RBP29.57■■■□□ 2.32
CNNM1-201ENST00000356713 ITGAEP38570 1179 aa29.55■■■□□ 2.32
CNNM1-201ENST00000356713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.54■■■□□ 2.32
CNNM1-201ENST00000356713 HNRNPUL2Q1KMD3 747 aaKnown RBP29.54■■■□□ 2.32
CNNM1-201ENST00000356713 CNGB1Q14028 1251 aaPredicted RBP29.49■■■□□ 2.31
CNNM1-201ENST00000356713 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
CNNM1-201ENST00000356713 SLC4A1APQ9BWU0 796 aaKnown RBP29.25■■■□□ 2.27
CNNM1-201ENST00000356713 TRIM26Q12899 539 aaPredicted RBP29.14■■■□□ 2.26
CNNM1-201ENST00000356713 HRCP23327 699 aa28.95■■■□□ 2.22
CNNM1-201ENST00000356713 CLSPNQ9HAW4 1339 aa28.9■■■□□ 2.22
CNNM1-201ENST00000356713 ZNF316A6NFI3 1004 aaPredicted RBP28.87■■■□□ 2.21
CNNM1-201ENST00000356713 LOC105371045A0A1W2PR82 267 aa28.81■■■□□ 2.2
CNNM1-201ENST00000356713 RTL5Q5HYW3 569 aaPredicted RBP28.7■■■□□ 2.19
CNNM1-201ENST00000356713 FAM50AQ14320 339 aaKnown RBP28.61■■■□□ 2.17
CNNM1-201ENST00000356713 TRIM52Q96A61 297 aa28.57■■■□□ 2.16
CNNM1-201ENST00000356713 NEUROD1Q13562 356 aa28.46■■■□□ 2.15
CNNM1-201ENST00000356713 DIEXFQ68CQ4 756 aaKnown RBP28.43■■■□□ 2.14
CNNM1-201ENST00000356713 BCANQ96GW7 911 aa28.39■■■□□ 2.14
CNNM1-201ENST00000356713 BCL11AQ9H165 835 aa28.39■■■□□ 2.14
CNNM1-201ENST00000356713 ZNF326Q5BKZ1 582 aaKnown RBP28.39■■■□□ 2.13
CNNM1-201ENST00000356713 SLC24A1O60721 1099 aa28.37■■■□□ 2.13
CNNM1-201ENST00000356713 ZBTB47Q9UFB7 747 aaPredicted RBP28.31■■■□□ 2.12
CNNM1-201ENST00000356713 CANXP27824 592 aaKnown RBP28.13■■■□□ 2.09
CNNM1-201ENST00000356713 FBLN2P98095 1184 aa28.11■■■□□ 2.09
CNNM1-201ENST00000356713 ANP32CO43423 234 aa28.09■■■□□ 2.09
CNNM1-201ENST00000356713 CDK11AQ9UQ88 783 aaPredicted RBP28.03■■■□□ 2.08
CNNM1-201ENST00000356713 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.08
CNNM1-201ENST00000356713 ARID3CA6NKF2 412 aa27.93■■■□□ 2.06
CNNM1-201ENST00000356713 GTF3C3Q9Y5Q9 886 aa27.92■■■□□ 2.06
CNNM1-201ENST00000356713 NEFMP07197 916 aa27.92■■■□□ 2.06
CNNM1-201ENST00000356713 P3H3Q8IVL6 736 aa27.76■■■□□ 2.03
CNNM1-201ENST00000356713 NPM2Q86SE8 214 aaKnown RBP27.73■■■□□ 2.03
CNNM1-201ENST00000356713 ZNF777Q9ULD5 760 aaPredicted RBP27.71■■■□□ 2.03
CNNM1-201ENST00000356713 PLPPR3Q6T4P5 718 aa27.66■■■□□ 2.02
CNNM1-201ENST00000356713 ABCC9O60706 1549 aa27.62■■■□□ 2.01
CNNM1-201ENST00000356713 ANP32AP39687 249 aaKnown RBP27.61■■■□□ 2.01
CNNM1-201ENST00000356713 ESF1Q9H501 851 aaKnown RBP27.52■■■□□ 2
CNNM1-201ENST00000356713 CHGAP10645 457 aaKnown RBP27.51■■□□□ 1.99
CNNM1-201ENST00000356713 STAG3Q9UJ98 1225 aa27.46■■□□□ 1.99
CNNM1-201ENST00000356713 HSP90AA1P07900 732 aaKnown RBP27.45■■□□□ 1.99
CNNM1-201ENST00000356713 ANP32BQ92688 251 aaKnown RBP27.39■■□□□ 1.97
CNNM1-201ENST00000356713 SALL2Q9Y467 1007 aaPredicted RBP27.33■■□□□ 1.97
CNNM1-201ENST00000356713 EIF5BO60841 1220 aaKnown RBP27.32■■□□□ 1.96
CNNM1-201ENST00000356713 FKBP8Q14318 412 aa27.28■■□□□ 1.96
CNNM1-201ENST00000356713 FAM9BQ8IZU0 186 aa27.25■■□□□ 1.95
CNNM1-201ENST00000356713 ACIN1Q9UKV3 1341 aaKnown RBP27.24■■□□□ 1.95
CNNM1-201ENST00000356713 UPF2Q9HAU5 1272 aaKnown RBP27.23■■□□□ 1.95
CNNM1-201ENST00000356713 HNRNPUQ00839 825 aaKnown RBP eCLIP27.18■■□□□ 1.94
CNNM1-201ENST00000356713 SCAF1Q9H7N4 1312 aaKnown RBP27.17■■□□□ 1.94
CNNM1-201ENST00000356713 TONSLQ96HA7 1378 aa27.17■■□□□ 1.94
CNNM1-201ENST00000356713 ARXQ96QS3 562 aa27.15■■□□□ 1.94
CNNM1-201ENST00000356713 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.13■■□□□ 1.93
CNNM1-201ENST00000356713 CSRNP3Q8WYN3 585 aa27.13■■□□□ 1.93
CNNM1-201ENST00000356713 A0A0G2JS52 829 aa27.11■■□□□ 1.93
CNNM1-201ENST00000356713 DDX10Q13206 875 aaKnown RBP27.07■■□□□ 1.92
CNNM1-201ENST00000356713 NPM1P06748 294 aaKnown RBP eCLIP27.06■■□□□ 1.92
CNNM1-201ENST00000356713 CHIC2Q9UKJ5 165 aa27.03■■□□□ 1.92
CNNM1-201ENST00000356713 PLEKHG5O94827 1062 aa27.02■■□□□ 1.92
CNNM1-201ENST00000356713 NBR1Q14596 966 aa27.01■■□□□ 1.91
CNNM1-201ENST00000356713 SENP3Q9H4L4 574 aaPredicted RBP27■■□□□ 1.91
CNNM1-201ENST00000356713 ZBTB7CA1YPR0 619 aa26.99■■□□□ 1.91
CNNM1-201ENST00000356713 WDR43Q15061 677 aaKnown RBP eCLIP26.98■■□□□ 1.91
CNNM1-201ENST00000356713 TMC1Q8TDI8 760 aa26.97■■□□□ 1.91
CNNM1-201ENST00000356713 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.96■■□□□ 1.91
CNNM1-201ENST00000356713 CCDC136Q96JN2 1154 aa26.96■■□□□ 1.91
CNNM1-201ENST00000356713 KDM2AQ9Y2K7 1162 aa26.95■■□□□ 1.91
CNNM1-201ENST00000356713 CDK11BP21127 795 aaKnown RBP26.84■■□□□ 1.89
CNNM1-201ENST00000356713 C14orf37Q86TY3 774 aa26.82■■□□□ 1.88
CNNM1-201ENST00000356713 IRX6P78412 446 aaPredicted RBP26.82■■□□□ 1.88
CNNM1-201ENST00000356713 MYH16Q9H6N6 1097 aa26.81■■□□□ 1.88
CNNM1-201ENST00000356713 MRS2Q9HD23 443 aa26.79■■□□□ 1.88
CNNM1-201ENST00000356713 GLIPR1L2Q4G1C9 344 aa26.74■■□□□ 1.87
CNNM1-201ENST00000356713 HIRIP3Q9BW71 556 aaPredicted RBP26.72■■□□□ 1.87
CNNM1-201ENST00000356713 TSPY4P0CV99 314 aa26.68■■□□□ 1.86
CNNM1-201ENST00000356713 TSPY10P0CW01 314 aa26.68■■□□□ 1.86
CNNM1-201ENST00000356713 PPP1R15AO75807 674 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms